CX047523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 188.734 bits (478), Expect = 3.475e-47 Identity = 101/209 (48.33%), Postives = 136/209 (65.07%), Query Frame = 1 Query: 58 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 684 EYDYLFKL+LIGDSGVGKS LL RF+ + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ + N+ +L+GNK+DL A+ E KAFA++ + FMETSA DATNVE AF + I + ++ + AG+N T+ +G+ + K+ GCCS Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQ--PAGNNARPPTVQIRGQPVAQKN--------GCCS 202
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.539e-47 Identity = 94/192 (48.96%), Postives = 125/192 (65.10%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTL-PSKGET 633 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A+NVE AF +IY+ + + + + + P G T Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHGAT 194
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 4.539e-47 Identity = 96/198 (48.48%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDS 654 Y+Y+FK ++IGD GVGKS LL +FT+N+F +S TIGVEF TR + ++NK +K QIWDTAGQER+RA+T +YYRGA GALLVYD+TR T+ ++ WL + R T+PN ++MLIGNK DL V+ E+ AFA+Q L F+E+SA NVE AF I++ V + V+ +G + P + T +D S Sbjct: 5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIPDGGITKNPPQTITDKPQDAS 202
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.928e-47 Identity = 93/199 (46.73%), Postives = 126/199 (63.32%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSS 657 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A+NVE AF +IY+ + + + + + + N S+ Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNASHGSN 201
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.742e-47 Identity = 95/208 (45.67%), Postives = 129/208 (62.02%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 684 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H+ N+++MLIGNK+DL V E+G+AFA + L FMETSA A NVE A+ +IY+ + + + + ++ I + S+ +G CS Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFD---------VHNEANGIKIGPQQSITSSVGPCS 201
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.742e-47 Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 573 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A+NVE AF +IY+ + + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB2A_MACFA (Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.742e-47 Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 573 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A+NVE AF +IY+ + + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.742e-47 Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 573 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A+NVE AF +IY+ + + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.742e-47 Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 573 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A+NVE AF +IY+ + + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173
BLAST of CX047523 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.742e-47 Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 1 Query: 61 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 573 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H++ N+++MLIGNK+DL V E+G+AFA + L FMETSA A+NVE AF +IY+ + + Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE 173 The following BLAST results are available for this feature:
BLAST of CX047523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047523 ID=CX047523; Name=CX047523; organism=Citrus sinensis; type=EST; length=853bpback to top |