CX047490

Overview
NameCX047490
Unique NameCX047490
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_POLSQ (Putative iron--sulfur cluster insertion protein erpA OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=erpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.828e-18
Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = -3 
Query:  424 TDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSF 732
            TDN   ++ +L A E  + +  LR+ V+ GGCSGFQY F  D  +N DD +FEK+GV L+VD++S+ ++ GA +DY E++  S FV+  NP+A   C C SSF
Sbjct:   22 TDNAAAKVADLIAEE-GNPELKLRVFVQGGGCSGFQYGFTFDDAVNEDDTLFEKNGVTLLVDSMSFQYLVGAEIDYKEDINGSQFVIK-NPNATTTCGCGSSF 122
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_AZOSB (Putative iron-sulfur cluster insertion protein erpA OS=Azoarcus sp. (strain BH72) GN=erpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.828e-18
Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = -3 
Query:  424 TDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSF 732
            TDN   +++EL   E  +    LR+ V  GGCSGFQY F  D ++N DD  FEK+GV L++D +SY ++ GA +DY E L  S FV+  NP+A   C C SSF
Sbjct:   14 TDNAANKVREL-IDEEGNPALKLRVFVTGGGCSGFQYGFTFDEEVNEDDTAFEKNGVTLLIDPMSYQYLVGAEIDYTEGLEGSQFVI-RNPNATSTCGCGSSF 114
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_AZOSE (Putative iron-sulfur cluster insertion protein erpA OS=Azoarcus sp. (strain EbN1) GN=erpA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.694e-18
Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = -3 
Query:  424 TDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSF 732
            TD+   ++KEL   E  + +  LR+ V  GGCSGFQY F  D ++N DD  FEK+GV L+VD +SY ++ GA +DY E L  S FV+  NP+A   C C SSF
Sbjct:   14 TDSAAMKVKEL-IEEEGNPELKLRVFVSGGGCSGFQYGFTFDEEVNEDDTAFEKNGVTLLVDPMSYQYLVGAEIDYSEGLEGSQFVI-RNPNATSTCGCGSSF 114
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_ACIBS (Iron--sulfur cluster insertion protein erpA OS=Acinetobacter baumannii (strain SDF) GN=erpA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.300e-18
Identity = 48/106 (45.28%), Postives = 68/106 (64.15%), Query Frame = -3 
Query:  418 MTDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSFMV 735
            +TDN   ++++L+ SE +D+  MLR+ V  GGCSGF Y F+    IN DD  F    VK++VD++SY ++ G+ VDYVE L  S F+V  NP+A   C C SSF +
Sbjct:    8 LTDNAANKVRQLRDSEGNDD-LMLRVYVTGGGCSGFSYGFNFAESINEDDAEFVNGDVKMLVDSLSYQYLVGSVVDYVEGLEGSRFIVQ-NPNATTTCGCGSSFSI 111
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_ACIBY (Iron--sulfur cluster insertion protein erpA OS=Acinetobacter baumannii (strain AYE) GN=erpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = -3 
Query:  418 MTDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSFMV 735
            +TDN   ++++L+ SE +D+  MLR+ V  GGCSGF Y F+    +N DD  F    VK++VD++SY ++ G+ VDYVE L  S F+V  NP+A   C C SSF +
Sbjct:    8 LTDNAANKVRQLRDSEGNDD-LMLRVYVTGGGCSGFSYGFNFAESVNEDDAEFVNGDVKMLVDSLSYQYLVGSVVDYVEGLEGSRFIVQ-NPNATTTCGCGSSFSI 111
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_ACIBT (Iron-sulfur cluster insertion protein erpA OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=erpA PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = -3 
Query:  418 MTDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSFMV 735
            +TDN   ++++L+ SE +D+  MLR+ V  GGCSGF Y F+    +N DD  F    VK++VD++SY ++ G+ VDYVE L  S F+V  NP+A   C C SSF +
Sbjct:    8 LTDNAANKVRQLRDSEGNDD-LMLRVYVTGGGCSGFSYGFNFAESVNEDDAEFVNGDVKMLVDSLSYQYLVGSVVDYVEGLEGSRFIVQ-NPNATTTCGCGSSFSI 111
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_ACIBC (Iron--sulfur cluster insertion protein erpA OS=Acinetobacter baumannii (strain ACICU) GN=erpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = -3 
Query:  418 MTDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSFMV 735
            +TDN   ++++L+ SE +D+  MLR+ V  GGCSGF Y F+    +N DD  F    VK++VD++SY ++ G+ VDYVE L  S F+V  NP+A   C C SSF +
Sbjct:    8 LTDNAANKVRQLRDSEGNDD-LMLRVYVTGGGCSGFSYGFNFAESVNEDDAEFVNGDVKMLVDSLSYQYLVGSVVDYVEGLEGSRFIVQ-NPNATTTCGCGSSFSI 111
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_ACIB5 (Iron--sulfur cluster insertion protein erpA OS=Acinetobacter baumannii (strain AB0057) GN=erpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = -3 
Query:  418 MTDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSFMV 735
            +TDN   ++++L+ SE +D+  MLR+ V  GGCSGF Y F+    +N DD  F    VK++VD++SY ++ G+ VDYVE L  S F+V  NP+A   C C SSF +
Sbjct:    8 LTDNAANKVRQLRDSEGNDD-LMLRVYVTGGGCSGFSYGFNFAESVNEDDAEFVNGDVKMLVDSLSYQYLVGSVVDYVEGLEGSRFIVQ-NPNATTTCGCGSSFSI 111
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_ACIB3 (Iron--sulfur cluster insertion protein erpA OS=Acinetobacter baumannii (strain AB307-0294) GN=erpA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = -3 
Query:  418 MTDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSFMV 735
            +TDN   ++++L+ SE +D+  MLR+ V  GGCSGF Y F+    +N DD  F    VK++VD++SY ++ G+ VDYVE L  S F+V  NP+A   C C SSF +
Sbjct:    8 LTDNAANKVRQLRDSEGNDD-LMLRVYVTGGGCSGFSYGFNFAESVNEDDAEFVNGDVKMLVDSLSYQYLVGSVVDYVEGLEGSRFIVQ-NPNATTTCGCGSSFSI 111
[Close]
BLAST of CX047490 vs. ExPASy Swiss-Prot
Match: ERPA_SODGM (Iron-sulfur cluster insertion protein erpA OS=Sodalis glossinidius (strain morsitans) GN=erpA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.075e-17
Identity = 50/108 (46.30%), Postives = 65/108 (60.19%), Query Frame = -3 
Query:  418 IHMTDNFIKRMKELQASETSDNKAMLRLGVETGGCSGFQYAFDLDYKINPDDRIFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSFMV 741
            +  TD+   ++K L A E + N   LR+ +  GGCSGFQY F  D K+N DD   EK GV LVVD +S  ++ G +VDY E L  S F+V TNP+A   C C SSF +
Sbjct:    9 LRFTDSAASKVKNLIADEENPN-LKLRVYITGGGCSGFQYGFTFDDKVNEDDFTIEKQGVALVVDPMSLQYLVGGSVDYSEGLEGSRFIV-TNPNAKTTCGCGSSFSI 114
The following BLAST results are available for this feature:
BLAST of CX047490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 314
Match NameE-valueIdentityDescription
ERPA_POLSQ2.828e-1845.63Putative iron--sulfur cluster insertion protein er... [more]
ERPA_AZOSB2.828e-1846.60Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_AZOSE3.694e-1847.57Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_ACIBS6.300e-1845.28Iron--sulfur cluster insertion protein erpA OS=Aci... [more]
ERPA_ACIBY8.229e-1844.34Iron--sulfur cluster insertion protein erpA OS=Aci... [more]
ERPA_ACIBT8.229e-1844.34Iron-sulfur cluster insertion protein erpA OS=Acin... [more]
ERPA_ACIBC8.229e-1844.34Iron--sulfur cluster insertion protein erpA OS=Aci... [more]
ERPA_ACIB58.229e-1844.34Iron--sulfur cluster insertion protein erpA OS=Aci... [more]
ERPA_ACIB38.229e-1844.34Iron--sulfur cluster insertion protein erpA OS=Aci... [more]
ERPA_SODGM1.075e-1746.30Iron-sulfur cluster insertion protein erpA OS=Soda... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14E02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14E02-J3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047490 ID=CX047490; Name=CX047490; organism=Citrus sinensis; type=EST; length=761bp
TTTTTTTTTTTTTTTTTCTCATCGAAACCAATCTTGCAGTTCCTGCTATT
ATTTGCCAGCATGGCGGCAGCAAATCATGGTTGCCTACAAACGGCTAAGG
AGAAATAGTACAATATAAATTCAATTCTCGATCCGCAAATGTGATGTAGT
ATGAAAATGGCACGTGTCTGAACATGACATTCCTTGTTGATAGATAAGCG
GCACATGCTTCAAACACCAAATGATATAGTAAAGATACATATGTCGCAAA
AAAAGGGGAAAAAATTACAAAAATGGATCTGATTCAAATGAATTGTAATG
GAAAAAATTGAAGTAAAAAAGTTGATTCAAAGATCCATTATAGCAAAACT
TAAATAGTCTCTCAGCCAAATTAAAAGTATGGTATCATGGTTCATGGAAT
GGGAAAAACTACTGTTTCACCATAAAGGAGCTTTTACAACTGCATCCGCC
CACTGCACTAGGATTTGTACTCACCACGAATGCAGAGCGGATCAGCTCCT
CAACATAATCAACAGTTGCCCCCTTTACAAAATCATATGAAATATTATCA
ACCACCAATTTAACTCCATCCTTCTCAAAAATCCTGTCATCAGGGTTGAT
TTTATAGTCCAAATCAAAAGCATATTGGAAACCAGAACATCCACCAGTTT
CCACACCCAACCGAAGCATAGCTTTATTGTCTGATGTTTCACTGGCTTGG
AGTTCTTTCATTCTTTTGATGAAATTATCAGTCATGTGAATGGAATCTAA
AGAAGGGGAAG
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