CX047471

Overview
NameCX047471
Unique NameCX047471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047471 vs. ExPASy Swiss-Prot
Match: CP1A2_CHICK (Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 33/107 (30.84%), Postives = 53/107 (49.53%), Query Frame = 1
Query:   16 AAIETTLWSIEWGIAELVNHPEIQKKLR-NELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWK 333
            A  +T   ++ W +  LV  P  QKK++ +ELDT +G   +    +   LPY +A I ET+     +P  +PH    D  L G+ +P E  + VN W + +    W+
Sbjct:   54 AGFDTVTTALSWSLMYLVTQPHSQKKIQESELDTAIGRERRSWLSERSMLPYKEAFILETVPTWQFVPFTIPHSTTRDTTLNGFHIPKECCVFVNQWQVNHEAELWE 160          
BLAST of CX047471 vs. ExPASy Swiss-Prot
Match: CP18A_DROME (Cytochrome P450 18a1 OS=Drosophila melanogaster GN=Cyp18a1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 44/171 (25.73%), Postives = 74/171 (43.27%), Query Frame = 1
Query:   16 AAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQ 528
            A +ET   ++ W    ++ +P+  +++++ELD V+G     T  D   LP  ++ I E++R    +PL   H    D +L GY +PA S ++     +  +P  W+K              KV        ++PFGVGRR C                 +  F++  P GQ
Sbjct:  328 AGMETIKTTLLWINVFMLRNPKEMRRVQDELDQVVGRHRLPTIEDLQYLPITESTILESMRRSSIVPLATTHSPTRDVELNGYTIPAGSHVIPLINSVHMDPNLWEKPEEFRPSRFIDTEGKVR---KPEYFIPFGVGRRMCLGDVLARMELFLFFASFMHCFDIALPEGQ 495          
BLAST of CX047471 vs. ExPASy Swiss-Prot
Match: C519E_DICDI (Probable cytochrome P450 519E1 OS=Dictyostelium discoideum GN=cyp519e1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 58/202 (28.71%), Postives = 84/202 (41.58%), Query Frame = 1
Query:   13 VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPG-HQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHD-AKLGGYDVPAESKILVNAWWLANN----PAQWKKXXXXXXXXXXXXXSKVEA--------------NGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGG 558
            +A  +T   ++EW    L N+PEIQKK   EL +V+G     +T       PYL   IKETLR+R   PL +  ++  D    GG  +P  ++I+ N + +  N    P+ +K               ++EA              N  D   LPF +G R+CP               ++ NFE     G  KID  E  G
Sbjct:  291 LAGSDTNASTLEWFCIFLANNPEIQKKAYEELISVVGKDCKAVTTKYRDDCPYLVGAIKETLRMRTPAPLSLIRVSEEDFMTSGGIFIPKGTQIVPNLYGIGQNFVDDPSSYKPERWVEYYKNKTPTREMEATTETKSNITTEILPNDLDKVVLPFSIGPRNCPGNIISEINLFLACSNILLNFEF--SNGGKKIDETEVFG 490          
BLAST of CX047471 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 1
Query:   13 VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKV-EANGNDFRYLPFGVGRRSC 441
            +A  +TT  S+ +    L  HPEIQKKL+ E+D    P  ++T     KL YL+ V+KE LRL     L+     L    + G ++ A + I V+ W L ++P  W                ++  A G    YLPFG+G R C
Sbjct:  325 LAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDREC-PDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESGDELFFAKGG---YLPFGMGPRIC 464          
BLAST of CX047471 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 46/170 (27.06%), Postives = 73/170 (42.94%), Query Frame = 1
Query:   13 VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPP 522
            +A  +T   SI W +  L  +PE Q++ R E+  +LG G  IT     ++ Y    IKET RL  A+P +   ++       G  +PA   ++++ W L +NPA WK              S      + + YLPF  G R+C                ++ +F + P P
Sbjct:  315 LAGHDTLAASISWILYCLALNPEHQERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVPSISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKVFDPLRFSQENSD---QRHPYAYLPFSAGSRNCIGQEFAMIELKVTIALILLHFRVTPDP 481          
BLAST of CX047471 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 43/140 (30.71%), Postives = 72/140 (51.43%), Query Frame = 1
Query:   25 ETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSC 441
            +TT  +I W +  L ++PE+QKK+ +ELD V G   +  T  D  KL YL+ VIKETLRL  ++PL    ++  D ++ GY V   ++ ++  + L  +P  +               ++     + + Y+PF  G R+C
Sbjct:  332 DTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVS-EDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQ---GRHPYAYVPFSAGPRNC 467          
BLAST of CX047471 vs. ExPASy Swiss-Prot
Match: CP4D2_DROME (Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 42/166 (25.30%), Postives = 81/166 (48.80%), Query Frame = 1
Query:   25 ETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ--ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLP 516
            +TT  +I + + E+  HPE+Q++L+ E+  VLG   +  +T  D  +L +++ VIKE+LRL   +P ++      D ++ G  +PA +   +  + L  +P  ++               ++    + + Y+PF  G R+C               +L+++FELLP
Sbjct:  314 DTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVP-MIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDADVPQI----HPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLP 474          
The following BLAST results are available for this feature:
BLAST of CX047471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 297
Match NameE-valueIdentityDescription
CP1A2_CHICK7.352e-1130.84Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN... [more]
CP18A_DROME7.352e-1125.73Cytochrome P450 18a1 OS=Drosophila melanogaster GN... [more]
C519E_DICDI7.352e-1128.71Probable cytochrome P450 519E1 OS=Dictyostelium di... [more]
C13A7_CAEEL7.352e-1132.64Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
CP4X1_HUMAN9.603e-1127.06Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
CP4V2_HUMAN9.603e-1130.71Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP4D2_DROME9.603e-1125.30Cytochrome P450 4d2 OS=Drosophila melanogaster GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14D03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14D03-H5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047471 ID=CX047471; Name=CX047471; organism=Citrus sinensis; type=EST; length=754bp
GAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGTG
GGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGCA
ATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAATCACTGAGCCTGAC
ACCCACAAACTACCCTACCTTCAGGCCGTGATCAAGGAAACTCTTCGCCT
TAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTTCACGACGCCA
AGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGCG
TGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCAG
GCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAATG
ACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGAAGCTGCCCTGGAATT
ATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAA
CTTTGAGCTCTTGCCTCCTCCAGGTCAATCTAAGATTGACACTGCAGAGA
AAGGTGGGCAGTTCAGTTTGCACATTTTGAAGCACTCGACCATTGTTGCC
AAGCCTAGATCATTCTAGTTTCACAATTCCATTTGGTTGTAATGTTAAGT
CTGTTTCAAAGTGGTTGAATGGTTTCTTCAATGTCGGATCAAATCAAGTG
GCAGTTGGCTAGTTATATAATACTTGTGTAAATTTGTGAACTTAAATCTT
CCCT
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