CX047468

Overview
NameCX047468
Unique NameCX047468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.433e-21
Identity = 53/163 (32.52%), Postives = 89/163 (54.60%), Query Frame = -2
Query:  345 EILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQF-GDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEPEPENEIGPVDQLIDEQRPKLYR 830
            +++ ++  + + V + L + + + + ++ + F     G   ++ +  N YP C  PD   G  PH DR+ IT+LL    V GL++   G W +V   P+A VVN G Q++++TNG+ KS  HR +TN+   R S+A F  P  E  IGP  + + ++ P  YR
Sbjct:  147 DVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNI--NHYPSCPNPDKALGQPPHCDRNLITLLLPGA-VNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKENPPCYR 306          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.433e-21
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = -2
Query:  348 EILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQF-GDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEPEPENEIGPVDQLIDEQRPKLY 830
            E+   Y  ++  ++  + + + +SL +    + + F G+ ++M  R N+YPPC RP    G  PH D + +TIL QD  V GLQ+  +G+W  +     A VVN+GD    ++NG YKS +HR V N+   R S+A F  PE +  + P   L+D   P+ Y
Sbjct:  162 EVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM--RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAY 320          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.871e-21
Identity = 52/164 (31.71%), Postives = 88/164 (53.66%), Query Frame = -2
Query:  339 EILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQFGDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEPEPENEIGPVDQLIDEQRPKLYRNV 830
            E++  Y    + V   + + + + L L  + F+       ++ V  N+YPP   P    G+ PH DR  +T+LL    V GL+I   G W +V  +P++LV+N G Q++++TNG  K+  HR  TN  + R+S+A+F  P  +  +GP ++ + E  P  YR +
Sbjct:  146 EVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVV-VDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGA-VPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASFIVPADDCVVGPAEEFVSEDNPPRYRTL 307          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.871e-21
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = -2
Query:  348 EILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQF-GDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEPEPENEIGPVDQLIDEQRPKLY 830
            E+   Y  ++  ++  + + + +SL +    + + F G+ ++M  R N+YPPC RP    G  PH D + +TIL QD  V GLQ+  +G+W  +     A VVN+GD    ++NG YKS +HR V N+   R S+A F  PE +  + P   L+D   P+ Y
Sbjct:  162 EVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM--RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.444e-21
Identity = 53/163 (32.52%), Postives = 92/163 (56.44%), Query Frame = -2
Query:  348 EILNEYAMKLKTVTEVLSKAIAKSLNL--EENSFLKQFGDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEPEPENEIGPVDQLIDEQRPKLY 830
            E+ + Y  ++  ++  L + + +SL +  +   + ++F  +    +R N+YP C RP    G  PH D + +TIL QD  V GL++  +G+W  +   P ALVVN+GD    ++N  Y+S +HR V N+   R S+A F  PE +  + P ++L+D+  P++Y
Sbjct:  169 EVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDH-VGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDHHPRVY 330          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.444e-21
Identity = 56/171 (32.75%), Postives = 101/171 (59.06%), Query Frame = -2
Query:  339 EILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQFGDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEPEPENE-------IGPVDQLIDEQRPKLYRNV 830
            +IL +Y+  ++ +  +L + ++++L L+ N   +    + L+ +  ++YP C +P+L  G   H+D   +TIL+QD ++ GLQI ++ +W  VP IP ALV+N+ D +Q++TN  +KS  HRV+ N    RIS+A     + + +        GP+ +LI E+ P +Y+ V
Sbjct:  206 DILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLG-HYYPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEV 374          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.444e-21
Identity = 59/165 (35.76%), Postives = 91/165 (55.15%), Query Frame = -2
Query:  345 EILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQFGDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEPEPENE---IGPVDQLIDEQRPKLYR 830
            E L +++  +K +   L + +++ L L+  S+LK + D   +    N+YPPC +P+L  G   HTD   +TILLQD ++ GLQ+     W  VP  P +LVVN+GD +Q+++N  Y S  HR ++N    R+SI  F    P       GP+ +L+ E  P  YR
Sbjct:  174 ESLIDFSKDVKKLGFTLLELLSEGLGLDR-SYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQD-DMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYR 336          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.191e-21
Identity = 65/192 (33.85%), Postives = 108/192 (56.25%), Query Frame = -2
Query:  273 EILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQFGDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTN-TEKLRISIAAF---TEPEPENEI-GPVDQLIDEQRPKLYRNVRNYGAINYECYQ-KGLVALDTVR 830
            EI+ EY+ ++  + E++ + ++++L L  N  LK+      + +  + +PPC  P+   G   HTDRS +TILL D    GLQ+  DG W  VP  P AL+ N+GD +Q+++N  + S  HR++ N  E+ RIS+A F   T   P + + GP+ +L+ E  P  YR+  +  + +Y   +  G  +LD +R
Sbjct:  169 EIMLEYSKEVMKLAELMFEILSEALGLSPNH-LKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSRVYGPIKELLSELNPPKYRDTTSESSNHYVARKPNGNSSLDHLR 358          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.213e-20
Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = -2
Query:  411 SEILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQFGDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQIRVDGKWYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEP 833
            S  + ++A + + +  +L++ +A+    + +SF K+   +    +R N YPPC +P  V+G+ PHTD   +TIL QD +V GLQ+  D +W  V   P AL++N+GD  Q  +NG+YKS  HRV+TN +  R S A F  P
Sbjct:  152 SSTMEKFASESEALAYMLAEVLAEKSG-QNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQD-QVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCP 290          
BLAST of CX047468 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.528e-20
Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = -2
Query:  384 FSEILNEYAMKLKTVTEVLSKAIAKSLNLEENSFLKQFGDQALMQVRFNFYPPCSRPDLVHGVKPHTDRSGITILLQDREVEGLQI-RVDGK-WYRVPVIPHALVVNLGDQMQIMTNGIYKSPMHRVVTNTEKLRISIAAFTEPEPENEIGPV 836
            ++++  EY+ KL  +   L + +++++ LE+ S      D    ++  N+YP C +PDL  G+K HTD   IT+LLQD +V GLQ  R DG  W  V  +  A VVNLGD    ++NG +K+  H+ V N+   R+SIA F  P PE  + P+
Sbjct:  152 WAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMD-QKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPL 302          
The following BLAST results are available for this feature:
BLAST of CX047468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
IDS3_HORVU1.433e-2132.522'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
GAO1A_WHEAT1.433e-2134.57Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
IDS2_HORVU1.871e-2131.71Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
GAO1D_WHEAT1.871e-2134.57Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
GAOX1_ORYSJ2.444e-2132.52Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
DV4H_CATRO2.444e-2132.75Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_SOLLC2.444e-2135.761-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH3.191e-2133.85Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G2OX8_ARATH1.213e-2038.30Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FL3H_MATIN3.528e-2037.91Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14D02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14D02-H3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047468 ID=CX047468; Name=CX047468; organism=Citrus sinensis; type=EST; length=837bp
TTTTTTTATAAAAAGGTAATTAGATTATACATTATGAAAAATATAACCAG
CAAACCGAGTACTATATAATTATGTTACATATTGTCACATATTTAACTTA
TTACAGATGAAATTCTAAGTACTTTTGAAATTCATTACAGATGAACAAAG
CCTGTCCGAACATGTTTTCACAGTTTCACTTTAATTTACACAATTCTTGT
AAGGATTGAAGTTCCCAGTAATATCCTACATTCATCATCAATCATCTGCG
GAAGAAACGGAGAAAATTAAGCTCTGACGGTATCAAGAGCAACCAACCCT
TTTTGATAGCACTCATAGTTGATAGCACCATAATTCCTAACATTTCTATA
TAATTTTGGTCTTTGCTCATCGATCAATTGATCCACAGGTCCAATCTCAT
TTTCCGGCTCTGGTTCAGTAAACGCGGCAATGGATATTCTCAACTTTTCT
GTGTTTGTCACAACCCTGTGCATAGGGCTTTTGTATATTCCATTAGTCAT
TATCTGCATTTGATCACCGAGATTGACTACAAGAGCATGAGGTATTACTG
GAACTCTGTACCATTTACCATCTACGCGAATTTGAAGACCTTCGACTTCT
CGATCTTGCAGGAGAATTGTAATTCCTGATCTATCTGTGTGTGGTTTGAC
TCCATGAACCAAATCAGGTCTTGAACATGGTGGATAGAAGTTAAACCGAA
CTTGCATTAAAGCTTGGTCTCCAAACTGTTTAAGGAAACTATTCTCTTCC
AAATTCAGAGACTTTGCTATTGCCTTGGACAGAACTTCTGTTACAGTCTT
TAACTTCATGGCATATTCGTTTAAGATCTCACTAAAC
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