CX047432

Overview
NameCX047432
Unique NameCX047432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.686e-14
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = -2
Query:  272 ARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSS-----GMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEIS 595
            A +DW E+  +H FK ++PG              VL I G+   E + +N  WH  ER +       F RR  LPENVK+DQ+KA +ENGVLTV VPK   ++ + V+ + I+
Sbjct:   22 ALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13
Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  272 FPPE-TSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISG-------QRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEIS 625
            FPP+  SA   A +DW ETP +H  + ++PGL             VL + G       ++  ERE K+  WH  ER    F+R   LP  V+++QI+AS++NGVLTV VPK     +   + I +S
Sbjct:   19 FPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKERERE-KDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKEPAPARPRTRPIAVS 143          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12
Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = -2
Query:  275 SAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 643
            +A S  +  +  A+     D KE P ++ F  D+PGL             VL ISG+R  E E +   + R ER  G F R+F LPEN   D I A  ++GVLTVTV K+        K IE+
Sbjct:   30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEV 152          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.641e-12
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = -2
Query:  275 SGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 655
            +G   + +  +  +  A+     D KE P A+AF  D+PGL             VL +SG+R  E  + +  + R ER  G F R+F LP+N  +D++ A   +GVLTVTV K+        K IE+
Sbjct:   35 TGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEV 161          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.506e-12
Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = -2
Query:  275 ETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWH-RWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 616
            +  A+     D KE P A+AF  D+PGL             VL ISG+R   RE++ D  + R ER  G F R+F LP+N  MD+I A   +GVLTVTV K+        K IE+
Sbjct:   46 DARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGER--RREEREDAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEV 158          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HS185_ARATH (18.5 kDa class IV heat shock protein OS=Arabidopsis thaliana GN=HSP18.5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.506e-12
Identity = 60/183 (32.79%), Postives = 84/183 (45.90%), Query Frame = -2
Query:  269 MSLIPSFFGNRR-----SSVFDPFSLDVWDPFRDFPLPSGYSS----AVSSQ-FPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTV-----------PKVEEARKANVKAIEISG 754
            MS+IP    NRR       +++PF L   + F DFP P+ + S    ++S + FP  +S+ VN +++W ETP AH FKA LPG+              LQI                        F  RF+LP N   DQ+ A ME+  L V V           P++EE R  NV+ +EI+G
Sbjct:    1 MSMIP--ISNRRRLSPGDRIWEPFEL--MNTFLDFPSPALFLSHHFPSLSREIFPQTSSSTVNTQLNWTETPTAHVFKAYLPGVDQDEVIAFVDEEGYLQIC------------------TGDNKFMSRFKLPNNALTDQVTAWMEDEFLVVFVEKDASSSPPQLPEIEENR--NVRVVEITG 159          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSPC2_RICFE (Small heat shock protein C2 OS=Rickettsia felis GN=hspC2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12
Identity = 48/153 (31.37%), Postives = 70/153 (45.75%), Query Frame = -2
Query:  269 NRRSSVFDPFSLDVWDPFRDFPLPSGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEISG 727
            N   ++FD F    ++ F  FP    YSS+      P T        D  ET   ++ + +LPG+              L I GQ+  + E+KN  +H  ER  G F R   LP N+  D I A  ENG+L +T+PK E+ +    + IE+ G
Sbjct:   22 NHLDNIFDDF----FNEFYTFP----YSSSTEKNLIPRT--------DISETDSGYSLEVELPGINQKDIDINIDNHI-LTIKGQKEEKSEEKNKNYHMRERYYGSFQRSISLPANINDDAINARFENGILHITIPKKEQGK---TRKIEVKG 154          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11
Identity = 47/128 (36.72%), Postives = 62/128 (48.44%), Query Frame = -2
Query:  275 SGYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWH-RWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 655
            S  SSA S  F  +  A+     D KE P ++ F  D+PGL             VL ISG+R  E E+K    + R ER  G   R+F LPEN   ++I A  ++GVLTVTV  V        + IE+
Sbjct:   25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEV 152          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11
Identity = 42/124 (33.87%), Postives = 61/124 (49.19%), Query Frame = -2
Query:  275 SSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQRGIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 646
            +S  S  +  +  A+     D KE P ++ F  D+PGL             VL ISG+R  E E +   + R ER  G F ++F LPE+   D+I A  ++GVLTVTV K+        K I++
Sbjct:   34 NSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQV 157          
BLAST of CX047432 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11
Identity = 43/130 (33.08%), Postives = 66/130 (50.77%), Query Frame = -2
Query:  275 GYSSAVSSQFPPETSAVVNARVDWKETPEAHAFKADLPGLXXXXXXXXXXXXXVLQISGQR----GIEREDKNDTWHRWERSSGMFSRRFRLPENVKMDQIKASMENGVLTVTVPKVEEARKANVKAIEI 652
            G +   +  +  +  A+     D K+ P A+AF  D+PGL             +L ISG+R    G E ++++  + R ER  G F R+F LP+N  +D+I A  ++GVLTVTV K+        K IE+
Sbjct:   34 GATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163          
The following BLAST results are available for this feature:
BLAST of CX047432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HS157_ARATH3.686e-1438.9415.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP16_ORYSJ4.075e-1336.5116.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP21_SOLPE1.549e-1236.5917.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP22_MAIZE2.641e-1233.0717.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_MAIZE4.506e-1240.0017.5 kDa class II heat shock protein OS=Zea mays P... [more]
HS185_ARATH4.506e-1232.7918.5 kDa class IV heat shock protein OS=Arabidopsi... [more]
HSPC2_RICFE7.685e-1231.37Small heat shock protein C2 OS=Rickettsia felis GN... [more]
HSP21_IPONI1.004e-1136.7217.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN1.004e-1133.8717.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ1.311e-1133.0818.0 kDa class II heat shock protein OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14B07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14B07-D13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047432 ID=CX047432; Name=CX047432; organism=Citrus sinensis; type=EST; length=824bp
TGCGATATGAATTTATAACTTTAGCTTTCACTCTATTAACTTCAACTCTT
TTTATTTATTTATTTTTTAAATTCTAAAGAGCACGAATACATTGTAAACA
AGATCAAATGACGCGCAGGGTTACAAAATTACATATCCCATTACAAGACA
CACAAAAATGGTAGGCGTCACATAAGACAACACTCAACTAAAAGTAATGA
ACCACAGACTCACTCGGGATTCAACACAAATTTTAAATCATCTTCGTTTA
TTAAATATCAATTTATCAGCCAGAAATTTCAATAGCCTTGACATTGGCTT
TCCTGGCCTCCTCCACCTTAGGGACTGTAACAGTGAGCACACCATTCTCC
ATGGAAGCCTTAATCTGATCCATCTTCACATTCTCGGGCAGCCTGAACCT
CCTGGAGAACATGCCGCTGCTGCGCTCCCAGCGATGCCACGTGTCGTTCT
TGTCTTCCCTCTCGATCCCCCTCTGCCCGCTTATCTGAAGCACCCTGTCG
TCCTCGACCTCGACCTTCACTTCCTCTTTCCTCAGCCCCGGAAGATCGGC
CTTGAACGCGTGGGCTTCCGGGGTTTCCTTCCAGTCCACGCGGGCGTTAA
CGACAGCAGAGGTTTCTGGAGGGAACTGAGACGACACCGCAGACGAATAG
CCAGACGGCAAAGGGAAGTCCCTGAATGGATCCCAAACGTCGAGCGAGAA
TGGATCGAACACACTGCTGCGTCGGTTGCCGAAGAAGCTTGGAATTAGCG
ACATTTTCTAGTTTTCTTTTCGGTTAAGAACTAATGGAAAAGTGGCTGTT
GCAGAATGTAGGATATGTAAACCT
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