CX047421

Overview
NameCX047421
Unique NameCX047421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 8.384e-28
Identity = 76/241 (31.54%), Postives = 127/241 (52.70%), Query Frame = -1
Query:  164 IIKNREKAMKAG---EAANDDL-LGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTL 865
            I++ RE+ ++ G   E++NDD  +G   + +F +I           S  D+ EE   F F G +TTS  L +    ++ H + Q++  +E+  V GN+K    +Y+ LN L  V + + E LR+YP V +L R VL++ ++    +PAG  IG+  + + +  EL+  +   FKPERF    +    N  +Y PF+ GPR C+GQ FA++E K  +A +L++Y  +        P  +  L
Sbjct:  256 IVQRREELIREGSSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFS-EPNSFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAEL 495          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.384e-28
Identity = 67/203 (33.00%), Postives = 121/203 (59.61%), Query Frame = -1
Query:  209 DLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 814
            D + ++ME ++ + ++  ++K    S  ++  +  +F FAG ETTS +L++T+  L+ H D Q++ ++E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P  ++H DP+ W  +  EF+PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  270 DFIYLMME-AYNKSKDKDSHK--ALSEIEITAQSIIFIFAGYETTSSILSFTVYSLATHPDIQKKLQEEIDEALPNKAPPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHWP-EPEEFQPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQ 467          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.095e-27
Identity = 62/174 (35.63%), Postives = 104/174 (59.77%), Query Frame = -1
Query:  212 DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSF 730
            +++ +  +F F G ETTS  L++ +  L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H +PE W  +  EF+PERF++  +K   N   Y PF  GPR CVG  FAL+  K+A+  ILQN+SF
Sbjct:    5 ELVAQTTIFIFGGYETTSTSLSFIIYELATHPDVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWP-EPEEFRPERFSKK-NKDGINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSF 176          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27
Identity = 76/214 (35.51%), Postives = 119/214 (55.61%), Query Frame = -1
Query:  125 KNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVP--TLHPELGTQLILRKL 754
            K    S  D+  E   F F G +TT+  ++W +  L+ H + Q+R R+E+  + G+     +D L+ +    M + E LRLYPPV  +SR + K  T     +LPAG+ + L +  +H +P++W  +  EF P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+A+A+ L    FEL+P     PT +P   LH + G  L LRKL
Sbjct:  296 KGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVWP-NPEEFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTL--LRFELAPDPSRKPTVIPEVVLHSKNGIHLKLRKL 503          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27
Identity = 69/217 (31.80%), Postives = 120/217 (55.30%), Query Frame = -1
Query:  209 REKAMKAGEAANDDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 853
            +E  MK  E    D L +++ + +++  E H    +V     +++ +  +F FAG ETTS  L++ + LL+ H D Q++ + E+     N  P  YD L  ++ + M++ E LRLYP    L R    + ++  L +P G  + +P   +H+DP+ W  +  EF+PERF++  ++ + N   Y PF  GPR C+G  FAL+  K+A+  +LQN++ +
Sbjct:  257 KENRMKEKEKQRVDFLQLMINSQNYKTKESHKALSDV-----EIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWP-EPEEFRPERFSKK-NQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQ 466          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.868e-27
Identity = 71/220 (32.27%), Postives = 120/220 (54.55%), Query Frame = -1
Query:  209 REKAMKAGEAANDDLLGILMETSFREIEEHGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 853
            +E  + + +    D L ++M +       H N+K+       S  ++  +  +F FAG ETTS  L++T+  L+ H D Q++ + E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W  +  EF+PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A+  I+QN+SF+
Sbjct:  257 KESRLDSKQKHRVDFLQLMMNS-------HNNSKDKVSHKALSDMEITAQSIIFIFAGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWS-EPEEFQPERFSKE-NKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.439e-27
Identity = 67/204 (32.84%), Postives = 118/204 (57.84%), Query Frame = -1
Query:  209 DLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 814
            D L +++++ + +E E H    ++  +   +I     F FAG ETTS +L++T+  L+ H D Q++ ++E+  V  N  P  YD +  ++ + M++ E LRL+P    L R+  K+ ++  + +P G  + +P   +H DP+ W  +  EF+PERF++   K + +   Y PF  GPR C+G  FAL+  K+A+  +LQN+SF+
Sbjct:  270 DFLQLMIDSQNSKETESHKALSDLELAAQSII-----FIFAGYETTSSVLSFTLYELATHPDVQQKLQKEIDAVLPNKAPPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYW-TEPEEFRPERFSK--KKDSIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 465          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.439e-27
Identity = 69/220 (31.36%), Postives = 120/220 (54.55%), Query Frame = -1
Query:  209 REKAMKAGEAANDDLLGILMETSFREIEEHGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 853
            +E  + + +    D L ++M         H N+K+       S  ++  +  +F FAG ETTS  L++T+  L+ H D Q++ ++E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W  +  EF+PERF++  +K + +   Y PF +GPR C+G  FA +  K+A+  ++QN+SF+
Sbjct:  257 KESRLDSKQKHRVDFLQLMMNA-------HNNSKDKDSHKALSDMEITAQSIVFIFAGYETTSSTLSFTLYCLATHPDIQKKLQEEIDETLPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWP-EPEEFQPERFSKE-NKGSIDPYLYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSFQ 467          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.186e-27
Identity = 59/180 (32.78%), Postives = 112/180 (62.22%), Query Frame = -1
Query:  203 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVL-SRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELS 739
            + +++I +  +F  AG +TT++ L+++  LL++H + Q++ ++EV +   N +  +D ++ LK ++ ++ E LR+YP  +++ +R  +KET +  + +  G  + +    +H DP++WG DA EF+PER+  G  +    +  Y PF +GPRIC+G   A++E KM +  IL+ Y+FE S
Sbjct:  312 TFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPNPEVTFDQISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTLHYDPKVWGEDANEFRPERWESG-DELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETS 490          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.161e-27
Identity = 75/241 (31.12%), Postives = 126/241 (52.28%), Query Frame = -1
Query:  164 IIKNREKAMKAG---EAANDDL-LGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTL 865
            I++ RE+ ++ G   E++ DD  +G   + +F +I           S  D+ EE   F F G +TTS  L +    ++ H + Q++  +E+  V GN+K    +Y+ LN L  V + + E LR+YP V +L R VL++ ++    +PAG  IG+  + + +  EL+  +   FKPERF    +    N  +Y PF+ GPR C+GQ FA++E K  +A +L++Y  +        P  +  L
Sbjct:  256 IVQRREELIREGSSQESSKDDADVGAKRKMAFLDILLQSTVDERPLSNLDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFS-EPNSFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAEL 495          
The following BLAST results are available for this feature:
BLAST of CX047421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP4D1_DROME8.384e-2831.54Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP3AG_MOUSE8.384e-2833.00Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP3AJ_CAPAE1.095e-2735.63Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP4AP_PIG1.868e-2735.51Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP3AD_MOUSE1.868e-2731.80Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]
CP3AB_MOUSE1.868e-2732.27Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP3A5_HUMAN2.439e-2732.84Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP341_MOUSE2.439e-2731.36Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
C13A5_CAEEL3.186e-2732.78Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
CP4D1_DROSI4.161e-2731.12Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A12-B23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047421 ID=CX047421; Name=CX047421; organism=Citrus sinensis; type=EST; length=874bp
TTTTAAGCTTTGAATCTCAATACAAAATTAAATACATTAAACTTCATTAT
AAAAGAGTCTACATTGGCATCATGCTAATCTTATTGACAATATATAGTTG
CCGGTATTAATTATTTTTGCACCTTAGTTTCCGTAGAATCAATTGGGTAC
CCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGAT
GGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGCCATGGCCATTTT
TGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAATG
CGAATGGGAAATATGAAACTTGATTTTTGGCCGCCTTTGAAATTCCTTCC
GCAAACCTTTCCGGCTTAAACTCAACTGCATCGTAACCCCAAAGTTCAGG
ATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTA
ATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGATCGACTAAGCACA
GTTACAGGCGGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAAT
TTTGAGGTGATTCAATCCATCATAGTTGGGCTTATTATTGCCAAACACTT
GCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAAT
AAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAAA
GTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACAT
TTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAGT
ATGCCTAACAAGTCATCGTTCGCAGCTTCCCCTGCTTTCATTGCCTTCTC
CCTATTTTTGATGATTCCCATCAA
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