CX047421

Overview
NameCX047421
Unique NameCX047421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C6A13_DROME (Probable cytochrome P450 6a13 OS=Drosophila melanogaster GN=Cyp6a13 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.979e-22
Identity = 65/209 (31.10%), Postives = 110/209 (52.63%), Query Frame = -1
Query:  203 DDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVF--GNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKL--GNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELS 817
            +DL+ +LME     +++         S   +  +  +F+ AG +T+S  +++ +  L+ + D QER R EVL V    N K  YD +  +  +  ++ E LR YP +  L R   KE ++   NL L  G +I +P+  +H DPEL+  D  +F P RF     KA ++  +Y PF  GPR C+G+ F  ++ K+ +  +L+++ F  S
Sbjct:  262 NDLIQLLMELGEEGVKD-------ALSFEQIAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLKRNNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYP-DPEKFDPSRFEPEEIKA-RHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLRDFKFSRS 461          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21
Identity = 66/230 (28.70%), Postives = 118/230 (51.30%), Query Frame = -1
Query:  209 IIKNREKAMKAGEAANDDLLGILMETSFREI---------EEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFE 865
            +I  R   M A E    D  G     + R           ++ GN      S  D+ EE   F F G +TT+  +NW++ LL  + + Q++   E+  VFG +++P   + L  L+ ++ ++ E LRL+P V + +RSV ++ ++    +  G +  +    +H+DP  +  +  EF+PERF    +   ++  +Y PF+ GPR C+GQ FA++E K  ++ IL+++  E
Sbjct:  268 VIAERANEMNANEDCRGDGRGSAPSKNKRRAFLDLLLSVTDDEGNR----LSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFP-NPEEFQPERFFPE-NAQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHFWIE 491          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP4D8_DROME (Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21
Identity = 71/211 (33.65%), Postives = 113/211 (53.55%), Query Frame = -1
Query:  128 NDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKL-----GNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVP-TLHPELGTQLILRK 733
            +++ EE   F F G +TT+  L++ +  LS+H + Q +  +E++QV G ++    +   L  LK ++ ++ E LR+YPPV ++ R +  + K      G+  +PAG +I + +  VH+ PE +  +  EF PER   G   A    +   PF+ GPR C+GQ FA +E KM +A I++ Y  EL P        V   L  E G QL +RK
Sbjct:  255 DEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFP-NPDEFIPERHENGSRVAPFKMI---PFSAGPRNCIGQKFAQLEMKMMLAKIVREY--ELLPMGQRVECIVNIVLRSETGFQLGMRK 459          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP6A8_DROME (Cytochrome P450 6a8 OS=Drosophila melanogaster GN=Cyp6a8 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 63/208 (30.29%), Postives = 114/208 (54.81%), Query Frame = -1
Query:  212 DDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPN--YDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLG---NLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSF 817
            +D + +L+E  + +E+     +   G +M +V+ +  +F+ AG ET+S  + + +  L+K+ D Q++ R EV +V   +  N  Y+    LK +  +L E LRLY  V  L R   K   +    N  + AG  + +P   +H DP ++  +  EF+PERF+   S A +  V++ PF  GPR C+G  F  ++A++ +A++++N+ F
Sbjct:  269 NDFMDMLIELKNQKEMTLENGDVVRGLTMEEVLAQAFVFFIAGFETSSSTMGFALYELAKNPDIQDKVRAEVEEVIEQHDQNFTYECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPNFVIEAGQSVIIPSSAIHHDPSIYP-EPFEFRPERFSPEES-AGRPSVAWLPFGDGPRNCIGLRFGQMQARIGLALLIRNFKF 474          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 61/189 (32.28%), Postives = 101/189 (53.44%), Query Frame = -1
Query:  218 EEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNY 772
            +EHG       S  D+  E   F F G +TT+  L+W +  L++H ++QER RQEV ++  + +P    +D L  L  + M + E LRL+PP   L R   ++  L     +P G    + +  +H +P +W  D   F P RF +  ++  ++ +S+ PF+ GPR C+GQ FA+ E K+ +A+ L  +
Sbjct:  309 DEHGKE----LSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVWELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPAIDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWP-DPEVFDPFRF-DSENRQKRSPLSFIPFSAGPRNCIGQTFAMNEMKVVVALTLLRF 491          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP4F3_HUMAN (Leukotriene-B(4) omega-hydroxylase 2 OS=Homo sapiens GN=CYP4F3 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 64/204 (31.37%), Postives = 103/204 (50.49%), Query Frame = -1
Query:  152 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWG----YDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPEL 739
            S  D+  E   F F G +TT+  L+W +  L+KH ++QER RQEV ++  + +P    +D L  L  + M + E LRL+PPV  +SR   ++  L     +P G+   + +   H +P +W     YD   F P+   E      ++ +++ PF+ GPR C+GQ FA+ E K+ + + L    F + P +       P   PEL
Sbjct:  314 SDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAQLPFLTMCIKESLRLHPPVPAVSRCCTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRFDPKNIKE------RSPLAFIPFSAGPRNCIGQAFAMAEMKVVLGLTL--LRFRVLPDHTE-----PRRKPEL 504          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 65/207 (31.40%), Postives = 108/207 (52.17%), Query Frame = -1
Query:  125 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 739
            S  D+  E   F F G +TT+  ++W +  L+ H   QER R+E+  + G+     ++ L+ +    M + E LRLYPPV  + R +       +  +LP G+ + L +  +H +P++W    V F P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+A A+ L  +     P+ +  P A   L  + G  L LR+L
Sbjct:  307 SDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEV-FDPFRFAPG---SAQHSHAFLPFSGGSRNCIGKQFAMNELKVATALTLLRFELLPDPTRIPIPIARLVLKSKNGIHLRLRRL 509          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CP46A_HUMAN (Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP46A1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 74/236 (31.36%), Postives = 118/236 (50.00%), Query Frame = -1
Query:  158 IKNREKAMKAGEAANDDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-NYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNYSFELSPSYVHAPTAVPTLHP 862
            ++ R +A+K GE    D+L  +++       E G   + G   N V      F+ AG ET++  L +T++ LS+  +   R + EV +V G+ +  +++ L  L+ +  +L E LRLYPP     R + +ET +  + +P    + L    V    + +  D + F P+RF  G   A K + +YFPF+LG R C+GQ FA +E K+ MA +LQ   F L P          TL P
Sbjct:  258 VQRRREALKRGEEVPADILTQILKA------EEGAQDDEGLLDNFVT-----FFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPL-LFSTYVMGRMDTYFEDPLTFNPDRFGPG---APKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKP 478          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: CYPD_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 1 OS=Bacillus subtilis GN=cypD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21
Identity = 70/212 (33.02%), Postives = 109/212 (51.42%), Query Frame = -1
Query:  215 GEAANDDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKLGN---LTLPAGVQIGLPMILVHQDPELWGYDAVEFKPERFAEGISKAAKNQV---SYFPFALGPRICVGQNFALVEAKMAMAMILQNYS 832
            G+    DLL  ++     E  E  +++N+ F +         F  AG ETTS LL++    L KH D  ++A +EV +V  +  P Y  +  L  ++MIL E LRL+P     S    ++T +G    +T    + + +P +  H+D + WG DA EF+PERF        ++QV   +Y PF  G R C+G  FAL EA + + MIL+ ++
Sbjct:  229 GDQDEKDLLARMLNVEDPETGEKLDDENIRFQIIT-------FLIAGHETTSGLLSFATYFLLKHPDKLKKAYEEVDRVLTDAAPTYKQVLELTYIRMILNESLRLWPTAPAFSLYPKEDTVIGGKFPITTNDRISVLIPQL--HRDRDAWGKDAEEFRPERFEH------QDQVPHHAYKPFGNGQRACIGMQFALHEATLVLGMILKYFT 425          
BLAST of CX047421 vs. ExPASy Swiss-Prot
Match: C4G15_DROME (Cytochrome P450 4g15 OS=Drosophila melanogaster GN=Cyp4g15 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21
Identity = 58/225 (25.78%), Postives = 119/225 (52.89%), Query Frame = -1
Query:  218 GIIKNREKAMKAGEAANDDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK--PNYDGLNHLKIVQMILYEVLRLYPPVTVLSRSVLKETKL--GNLTLPAGVQIGLPMILVHQDPELWG----YDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMAMAMILQNY 868
            G+   +   +K      D+ +G     +F ++           +  ++ E+     F G +TT+   ++ + L+  HQD Q+R   E+  +FG+++    +     +K ++  L E LR+YPPV +++R + ++ KL  GN  +P G  + +  +L+H++P+++     +D   F PER      +A ++  ++ PF+ GPR CVG+ +A+++ K+ ++ IL+NY
Sbjct:  322 GLSYGQSAGLKDDLDVEDNDIGEKKRLAFLDLMLESAQNGALITDTEIKEQVDTIMFEGHDTTAAGSSFFLSLMGIHQDIQDRVLAELDSIFGDSQRPATFQDTLEMKYLERCLMETLRMYPPVPLIARELQEDLKLNSGNYVIPRGATVTVATVLLHRNPKVYANPNVFDPDNFLPER------QANRHYYAFVPFSAGPRSCVGRKYAMLKLKILLSTILRNY 540          
The following BLAST results are available for this feature:
BLAST of CX047421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C6A13_DROME8.979e-2231.10Probable cytochrome P450 6a13 OS=Drosophila melano... [more]
CP4V2_HUMAN1.173e-2128.70Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP4D8_DROME1.173e-2133.65Cytochrome P450 4d8 OS=Drosophila melanogaster GN=... [more]
CP6A8_DROME1.532e-2130.29Cytochrome P450 6a8 OS=Drosophila melanogaster GN=... [more]
CP4F5_RAT1.532e-2132.28Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CP4F3_HUMAN1.532e-2131.37Leukotriene-B(4) omega-hydroxylase 2 OS=Homo sapie... [more]
CP4AB_HUMAN1.532e-2131.40Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP46A_HUMAN1.532e-2131.36Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP4... [more]
CYPD_BACSU2.000e-2133.02Probable bifunctional P-450/NADPH-P450 reductase 1... [more]
C4G15_DROME2.000e-2125.78Cytochrome P450 4g15 OS=Drosophila melanogaster GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A12-B23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047421 ID=CX047421; Name=CX047421; organism=Citrus sinensis; type=EST; length=874bp
TTTTAAGCTTTGAATCTCAATACAAAATTAAATACATTAAACTTCATTAT
AAAAGAGTCTACATTGGCATCATGCTAATCTTATTGACAATATATAGTTG
CCGGTATTAATTATTTTTGCACCTTAGTTTCCGTAGAATCAATTGGGTAC
CCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGAT
GGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGCCATGGCCATTTT
TGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAATG
CGAATGGGAAATATGAAACTTGATTTTTGGCCGCCTTTGAAATTCCTTCC
GCAAACCTTTCCGGCTTAAACTCAACTGCATCGTAACCCCAAAGTTCAGG
ATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTA
ATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGATCGACTAAGCACA
GTTACAGGCGGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAAT
TTTGAGGTGATTCAATCCATCATAGTTGGGCTTATTATTGCCAAACACTT
GCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAAT
AAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAAA
GTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACAT
TTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAGT
ATGCCTAACAAGTCATCGTTCGCAGCTTCCCCTGCTTTCATTGCCTTCTC
CCTATTTTTGATGATTCCCATCAA
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