CX047419

Overview
NameCX047419
Unique NameCX047419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.409e-43
Identity = 87/181 (48.07%), Postives = 124/181 (68.51%), Query Frame = -3
Query:  336 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 872
            G K+++EKK+LEV ++KGM++GQKITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  198 GRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.409e-43
Identity = 87/181 (48.07%), Postives = 124/181 (68.51%), Query Frame = -3
Query:  336 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 872
            G K+++EKK+LEV ++KGM++GQKITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  198 GRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.409e-43
Identity = 87/181 (48.07%), Postives = 124/181 (68.51%), Query Frame = -3
Query:  336 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 872
            G K+++EKK+LEV ++KGM++GQKITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  198 GRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.065e-43
Identity = 86/181 (47.51%), Postives = 124/181 (68.51%), Query Frame = -3
Query:  336 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 872
            G K+++EKK+LEV ++KGM++GQKITF GE D+ P    GDI+ VL QK+H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F ++FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  198 GRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.205e-42
Identity = 85/174 (48.85%), Postives = 120/174 (68.97%), Query Frame = -3
Query:  375 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 875
            +G+KVI+E K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV +LQ+KEH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  206 EGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.579e-42
Identity = 84/174 (48.28%), Postives = 119/174 (68.39%), Query Frame = -3
Query:  375 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSV-----QLTDMELDECEET 875
            +G+KVI+E K+LEV V+KGM++GQ+ITF GEAD+AP    GDIV  +Q+KEH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F V FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  206 EGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38
Identity = 81/166 (48.80%), Postives = 114/166 (68.67%), Query Frame = -3
Query:  381 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECE 872
            G KVI+EKK++EV VEKGM++GQKI F GE D+ P+   GD++ VL QK+H  F+R+G DL ++  + L+EALCGF+  I  LD R L+I S+ GEV+K    + + DEGMP+Y+ P  +G L I F V FPE   LS ++   LE +LPPR  V++TD ++D+ E
Sbjct:  199 GAKVIREKKIIEVHVEKGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITD-DMDQVE 363          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.012e-38
Identity = 84/182 (46.15%), Postives = 120/182 (65.93%), Query Frame = -3
Query:  333 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 872
            G KV +EKK++EV VEKGM++GQKI F GE D+ P+   GD++ VL QK+H  F+R+G DL ++  + L+EALCGF+  I  LD R L+I S+ GEV+K    K I +EGMP+Y+ P  +G + I F V FPE   LS ++   LE +LPPR  V++TD ++D+ E   L + N  E+  R+
Sbjct:  199 GAKVTREKKIIEVHVEKGMKDGQKILFHGEGDQEPELDPGDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLPQLEALLPPRQKVRITD-DMDQVE---LKEFNPNEQSWRQ 376          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.365e-36
Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = -3
Query:  423 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPR 872
            G KVI ++K+L V VEKGM NGQKI F  E ++AP  + GD++FV+ QKEHP+FKR GD LF E  + L  AL G Q V+ HLD R L I   PGE ++P++ K +  +GM + QR    G LYI F VDFPE    +P+Q  +LE  LPPR
Sbjct:  200 GAKVISQRKILTVHVEKGMHNGQKIVFKEEGEQAPGIIPGDVIFVIDQKEHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGM-LSQRHHQPGNLYIRFHVDFPEPNFATPEQLALLEKALPPR 350          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.357e-30
Identity = 71/166 (42.77%), Postives = 101/166 (60.84%), Query Frame = -3
Query:  384 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQL-TDMELDEC 872
            G+KV  E+K+LEV VE GM++GQ+I F GEAD+APD + GD+VF++ ++ H  FKR GDDL  E  + L  A+ G +F + H+ G  L +   PGEV+ P   K I  +GMP+  +    G L I F++ FPE+   S +  K LE +LPPR    +     +DEC
Sbjct:  206 GKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI-PKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEILPPRIVPAIPKKATVDEC 370          
The following BLAST results are available for this feature:
BLAST of CX047419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
DNJA1_MOUSE5.409e-4348.07DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN5.409e-4348.07DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNJA1_BOVIN5.409e-4348.07DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ1_CERAE7.065e-4347.51DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA2_MOUSE1.205e-4248.85DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_RAT4.579e-4248.28DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA4_HUMAN2.352e-3848.80DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
DNJA4_MOUSE4.012e-3846.15DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
MAS5_SCHPO8.365e-3650.66Mitochondrial protein import protein mas5 OS=Schiz... [more]
MAS5_YEAST2.357e-3042.77Mitochondrial protein import protein MAS5 OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A11-B21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047419 ID=CX047419; Name=CX047419; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTTTAACACCACCCTGAAATATTGTAAACACTAAAAA
TATTAATTATGAGCATTGAGTCTGAAGGTGCAAACGCTAGAATTCCATTA
CATAGTCAGTTATCAGAAAAACATAAGAATAAAGACAGACAAACCAAAAC
TAGAACCTCTAAAGCCTATAACAGAAAATAAATATGTTGAGAATCTTTTT
CTCCCAAACAATGAAAATACTAAATCAGGCCACCCCTTTTCTTCTACATC
ATCACTGCTGAGCACACTGCACTCTCTGGGCACCACCTTGCATATCGTCA
TCTTCATCGTATGCCTCCTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTC
CTCAATGTTCACATCATGCAGGGTTGTTTCTTCACACTCATCCAGTTCCA
TATCGGTGAGCTGGACTGAGGTCCTTGGAGGTAGTACGGTCTCCAGCATC
TTGCACTGGTCTGGGCTCAGTGACTCAGGGAAGTCAACACTGAAATGAAT
GTACAGTTTGCCCCTCATAAATGGCCTCTGATACATAGGCATTCCTTCAT
CATTTATGGCCTTGAATTGGTCCGGCTTGACTACTTCCCCAGGCTGGGAT
TTGATGAGGAGTTGCCGGCCATCCAAATGAGTTATTACAAATTGAAAGCC
ACAGAGAGCTTCTGTCAGTGACAGGGTGTGCTCAACAAATAGGTCATCAC
CCTTTCGCTTAAATTTCGGGTGCTCTTTCTGTTGTAGAACAAATACAATG
TCACCTGTGACAGTGTCGGGCGCTTCATCAGCTTCTCCAGGGAACGTAAT
CTTCTGTCCATTTTGCATCCCCTTCTCAACAATAACCTCCAAGACTTTTT
TCTCCTGAATGACCTTCTCACCCTTAC
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