CX047419

Overview
NameCX047419
Unique NameCX047419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 39/146 (26.71%), Postives = 82/146 (56.16%), Query Frame = -3
Query:  441 KGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 875
            KGE + ++++ + + +  G+++G ++   GE +  P+   +GD+  V   K+HP F+R+G+DL V+ ++SL+ A  G +  +  +DG+ + +K   G   +  Q   +   G+P Y   + +G  ++   V+ P+ LS  Q +++E
Sbjct:  212 KGEGLTEKRRTIHIKIPAGVESGSRLKVSGEGESGPNGGPSGDLYVVTHIKKHPVFERQGNDLIVQKSISLSMACLGGEIEVPSIDGKTIQLKIPEG--TESGQIFRLKGHGIP-YLGSYGKGDQHVIIKVEIPKKLSKKQKELME 354          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: XDJ1_YEAST (DnaJ protein homolog XDJ1 OS=Saccharomyces cerevisiae GN=XDJ1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12
Identity = 49/145 (33.79%), Postives = 75/145 (51.72%), Query Frame = -3
Query:  477 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVT-GDIVFVLQQKEHPKFKRK----------GDDLFVEHTLSLTEALCGFQ-FVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMR-GKLYIHFSVDFP 872
            G  ++ +K+++ V V  G      IT  G ADE  D  T GD+ F L +K+    +++          G+DL+   T+SL+EAL GF+ F+    D R L +  +PG VV+P     I +EG P+   P  R G LY+   ++FP
Sbjct:  233 GLGLLSKKEIITVNVAPGHHFNDVITVKGMADEEIDKTTCGDLKFHLTEKQENLEQKQIFLKNFDDGAGEDLYTSITISLSEALTGFEKFLTKTFDDRLLTLSVKPGRVVRPGDTIKIANEGWPILDNPHGRCGDLYVFVHIEFP 377          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_OCHA4 (Chaperone protein dnaJ OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.449e-12
Identity = 45/145 (31.03%), Postives = 79/145 (54.48%), Query Frame = -3
Query:  441 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 872
            G+  + +++ L V +  G+++G +I   GE +       +GD+   L  K H  F+R G DL+ +  +S+T A  G QF ++ LDG Q  +K  P       QF+ +  +GMP+ ++  + G LYI   ++ P++LS  Q ++LE
Sbjct:  206 GQGRVTQERSLSVNIPAGIEDGTRIRLSGEGEAGMRGGPSGDLYIFLSVKPHEFFQRDGSDLYCKVPISMTTAALGGQFEVSTLDGTQTRVK-VPDGTQNGKQFR-LKGKGMPVLRQAAV-GDLYIQIDIETPQNLSKRQRELLE 347          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_MESSB (Chaperone protein dnaJ OS=Mesorhizobium sp. (strain BNC1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 47/145 (32.41%), Postives = 79/145 (54.48%), Query Frame = -3
Query:  441 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 872
            G+  + E++ L V +  G+++G +I   GE +        GD+   L  K H  F+R G DL+ +  +S+T A  G  F +T LDG Q  +K   G      QF+ +  +GMP+ ++P + G LYI  +V+ P++L+  Q ++LE
Sbjct:  203 GQGRLTEERSLSVNIPAGIEDGTRIRLAGEGEAGLRGGPPGDLYIFLSIKPHEFFQRDGADLYCKVPISMTTAALGGSFEVTTLDGTQTRVKVPEG-TQSGRQFR-LRGKGMPVLRQPQV-GDLYIQVAVETPQNLTRRQRELLE 344          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUSU (Chaperone protein dnaJ OS=Brucella suis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  441 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 872
            G+  + +++ L V +  G+++G +I   GE +        GD+   L  K H  F+R G DL+ +  +S+T A  G QF ++ LDG Q  +K   G      QF+ +  +GMP+  R  + G LYI   ++ P++LS  Q ++LE
Sbjct:  206 GQGRVTQERSLSVNIPAGIEDGTRIRLAGEGEAGLRGGPAGDLYIFLSVKPHEFFQRDGADLYCKVPISMTTAALGGQFEVSTLDGTQTRVKVPEG-TQNGKQFR-LKGKGMPVL-RQSVTGDLYIQIDIETPQNLSKRQRELLE 347          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUSI (Chaperone protein dnaJ OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  441 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 872
            G+  + +++ L V +  G+++G +I   GE +        GD+   L  K H  F+R G DL+ +  +S+T A  G QF ++ LDG Q  +K   G      QF+ +  +GMP+  R  + G LYI   ++ P++LS  Q ++LE
Sbjct:  206 GQGRVTQERSLSVNIPAGIEDGTRIRLAGEGEAGLRGGPAGDLYIFLSVKPHEFFQRDGADLYCKVPISMTTAALGGQFEVSTLDGTQTRVKVPEG-TQNGKQFR-LKGKGMPVL-RQSVTGDLYIQIDIETPQNLSKRQRELLE 347          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUO2 (Chaperone protein dnaJ OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dnaJ PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  441 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 872
            G+  + +++ L V +  G+++G +I   GE +        GD+   L  K H  F+R G DL+ +  +S+T A  G QF ++ LDG Q  +K   G      QF+ +  +GMP+  R  + G LYI   ++ P++LS  Q ++LE
Sbjct:  206 GQGRVTQERSLSVNIPAGIEDGTRIRLAGEGEAGLRGGPAGDLYIFLSVKPHEFFQRDGADLYCKVPISMTTAALGGQFEVSTLDGTQTRVKVPEG-TQNGKQFR-LKGKGMPVL-RQSVTGDLYIQIDIETPQNLSKRQRELLE 347          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUME (Chaperone protein dnaJ OS=Brucella melitensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  441 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 872
            G+  + +++ L V +  G+++G +I   GE +        GD+   L  K H  F+R G DL+ +  +S+T A  G QF ++ LDG Q  +K   G      QF+ +  +GMP+  R  + G LYI   ++ P++LS  Q ++LE
Sbjct:  206 GQGRVTQERSLSVNIPAGIEDGTRIRLAGEGEAGLRGGPAGDLYIFLSVKPHEFFQRDGADLYCKVPISMTTAALGGQFEVSTLDGTQTRVKVPEG-TQNGKQFR-LKGKGMPVL-RQSVTGDLYIQIDIETPQNLSKRQRELLE 347          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUMB (Chaperone protein dnaJ OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  441 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 872
            G+  + +++ L V +  G+++G +I   GE +        GD+   L  K H  F+R G DL+ +  +S+T A  G QF ++ LDG Q  +K   G      QF+ +  +GMP+  R  + G LYI   ++ P++LS  Q ++LE
Sbjct:  206 GQGRVTQERSLSVNIPAGIEDGTRIRLAGEGEAGLRGGPAGDLYIFLSVKPHEFFQRDGADLYCKVPISMTTAALGGQFEVSTLDGTQTRVKVPEG-TQNGKQFR-LKGKGMPVL-RQSVTGDLYIQIDIETPQNLSKRQRELLE 347          
BLAST of CX047419 vs. ExPASy Swiss-Prot
Match: DNAJ_BRUC2 (Chaperone protein dnaJ OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = -3
Query:  441 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 872
            G+  + +++ L V +  G+++G +I   GE +        GD+   L  K H  F+R G DL+ +  +S+T A  G QF ++ LDG Q  +K   G      QF+ +  +GMP+  R  + G LYI   ++ P++LS  Q ++LE
Sbjct:  206 GQGRVTQERSLSVNIPAGIEDGTRIRLAGEGEAGLRGGPAGDLYIFLSVKPHEFFQRDGADLYCKVPISMTTAALGGQFEVSTLDGTQTRVKVPEG-TQNGKQFR-LKGKGMPVL-RQSVTGDLYIQIDIETPQNLSKRQRELLE 347          
The following BLAST results are available for this feature:
BLAST of CX047419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
DNAJ_LEPBA4.466e-1326.71Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
XDJ1_YEAST3.781e-1233.79DnaJ protein homolog XDJ1 OS=Saccharomyces cerevis... [more]
DNAJ_OCHA46.449e-1231.03Chaperone protein dnaJ OS=Ochrobactrum anthropi (s... [more]
DNAJ_MESSB8.423e-1232.41Chaperone protein dnaJ OS=Mesorhizobium sp. (strai... [more]
DNAJ_BRUSU8.423e-1231.72Chaperone protein dnaJ OS=Brucella suis GN=dnaJ PE... [more]
DNAJ_BRUSI8.423e-1231.72Chaperone protein dnaJ OS=Brucella suis (strain AT... [more]
DNAJ_BRUO28.423e-1231.72Chaperone protein dnaJ OS=Brucella ovis (strain AT... [more]
DNAJ_BRUME8.423e-1231.72Chaperone protein dnaJ OS=Brucella melitensis GN=d... [more]
DNAJ_BRUMB8.423e-1231.72Chaperone protein dnaJ OS=Brucella melitensis biot... [more]
DNAJ_BRUC28.423e-1231.72Chaperone protein dnaJ OS=Brucella canis (strain A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A11-B21-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047419 ID=CX047419; Name=CX047419; organism=Citrus sinensis; type=EST; length=877bp
TTTTTTTTTTTTTTTTTAACACCACCCTGAAATATTGTAAACACTAAAAA
TATTAATTATGAGCATTGAGTCTGAAGGTGCAAACGCTAGAATTCCATTA
CATAGTCAGTTATCAGAAAAACATAAGAATAAAGACAGACAAACCAAAAC
TAGAACCTCTAAAGCCTATAACAGAAAATAAATATGTTGAGAATCTTTTT
CTCCCAAACAATGAAAATACTAAATCAGGCCACCCCTTTTCTTCTACATC
ATCACTGCTGAGCACACTGCACTCTCTGGGCACCACCTTGCATATCGTCA
TCTTCATCGTATGCCTCCTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTC
CTCAATGTTCACATCATGCAGGGTTGTTTCTTCACACTCATCCAGTTCCA
TATCGGTGAGCTGGACTGAGGTCCTTGGAGGTAGTACGGTCTCCAGCATC
TTGCACTGGTCTGGGCTCAGTGACTCAGGGAAGTCAACACTGAAATGAAT
GTACAGTTTGCCCCTCATAAATGGCCTCTGATACATAGGCATTCCTTCAT
CATTTATGGCCTTGAATTGGTCCGGCTTGACTACTTCCCCAGGCTGGGAT
TTGATGAGGAGTTGCCGGCCATCCAAATGAGTTATTACAAATTGAAAGCC
ACAGAGAGCTTCTGTCAGTGACAGGGTGTGCTCAACAAATAGGTCATCAC
CCTTTCGCTTAAATTTCGGGTGCTCTTTCTGTTGTAGAACAAATACAATG
TCACCTGTGACAGTGTCGGGCGCTTCATCAGCTTCTCCAGGGAACGTAAT
CTTCTGTCCATTTTGCATCCCCTTCTCAACAATAACCTCCAAGACTTTTT
TCTCCTGAATGACCTTCTCACCCTTAC
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