CX047412

Overview
NameCX047412
Unique NameCX047412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDI_ALTAL (Protein disulfide-isomerase (Fragment) OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 53/107 (49.53%), Postives = 73/107 (68.22%), Query Frame = 1
Query:   52 QIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQND---ADVVIAKFDATANDIPGDTFEVQGY 363
            +I  +V ++  GK+ P  KSEPIPE N+ PV V+VA + +D+V ++ K+VL+EFYAPWCGHCK LAP  +E+   Y +D     V IAK DAT ND+P    E+QG+
Sbjct:  208 EIGKFVDDFLAGKIDPSIKSEPIPESNDGPVTVVVAHNYKDVVIDNDKDVLVEFYAPWCGHCKALAPKYEELGQLYASDELSKLVTIAKVDATLNDVPD---EIQGF 311          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDIA2_HUMAN (Protein disulfide-isomerase A2 OS=Homo sapiens GN=PDIA2 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.077e-21
Identity = 55/140 (39.29%), Postives = 84/140 (60.00%), Query Frame = 1
Query:   85 GKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASG-KTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE 495
            G+V P+  S+ IP + +  PVK LV  + + + F+  KNV ++FYAPWC HCK++AP  + +A  YQ+  D++IA+ DATAN++  D F V G+PT+ +F +  G K + Y+  R  E    F++N      P E   EE
Sbjct:  370 GQVKPYLLSQEIPPDWDQRPVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDIIIAELDATANEL--DAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLETFSKFLDNG--GVLPTEEPPEE 505          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.091e-21
Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 1
Query:   40 LDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIENN 456
            L++  I   VK++ +G   P  KS+ I E  +  V  LV  +  ++V +  K+VL+ +YAPWCGHCK+LAP   E+A +Y N  +DV+IAK D T ND+ G    ++GYPT+       K  +V Y+G R+ + + DFI+ N
Sbjct:  344 LESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG--VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKEN 483          

HSP 2 Score: 67.781 bits (164), Expect = 8.551e-11
Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 1
Query:  100 FRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT--VFFRSASGKTVPYEGDRTKEDIVDFI 447
            F + E +  E++  VK L  DS  + +  S   VL EF+APWCGHCK +AP   + A +   + ++ +A+ D T N        + G+P+  +F  S    ++ YEG RT E IV F+
Sbjct:   21 FAQQEAVAPEDSAVVK-LATDSFNEYI-QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLV-EKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFM 135          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.115e-21
Identity = 50/126 (39.68%), Postives = 79/126 (62.70%), Query Frame = 1
Query:   85 GKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASG-KTVPYEGDRTKEDIVDFIEN 453
            G+V P+  S+ +P + +  PVK LV  + + + F+  KNV ++FYAPWC HCK++AP  + +A  YQ+  DV+IA+ DATAN++  D F V G+PT+ +F +  G K + Y+  R       F++N
Sbjct:  370 GQVKPYLLSQEVPPDWDQRPVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDVIIAELDATANEL--DAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLGTFSKFLDN 493          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: EUG1_YEAST (Protein disulfide-isomerase EUG1 OS=Saccharomyces cerevisiae GN=EUG1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.008e-19
Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = 1
Query:   22 KYLKPN-LDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADV----VIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFIENN 456
            K  KP  LD D I   VK+Y+EG   P  KSE IP+E    V  +V  +  D+V +  K+VL+++YA WC H K+ API +E+A    +D  V    +IA+ D+ ANDI   +F V GYPT+    A   + P  +   R  ED+ +FI+ +
Sbjct:  336 KLEKPQPLDRDMIVQLVKDYREGTAKPIVKSEEIPKEQKSNVYKIVGKTHDDIVHDDDKDVLVKYYATWCIHSKRFAPIYEEIANVLASDESVRDKILIAEVDSGANDIL--SFPVTGYPTIALYPAGNNSKPIIFNKIRNLEDVFEFIKES 485          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.932e-19
Identity = 64/181 (35.36%), Postives = 97/181 (53.59%), Query Frame = 1
Query:   19 QKYLKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEESGKDEL*EGMGASLLESRAHS 558
            QKY  P  +A+ +A +V   KEG      K   +P+     V VL  D+  ++V +  K+VL+EFYAPWCGHCK LAP  ++VA  ++ +  VVIA  DA A+   G+ + V G+PT+ FF   +     Y+G R  +D V FI  N      +++  + + K  + E + A + E  A S
Sbjct:  111 QKYEGPR-NAEALAEYVN--KEGGTNV--KLAAVPQN----VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFI--NEKSGTSRDSKGQLTSKAGIVESLDALVKELVAAS 280          

HSP 2 Score: 77.411 bits (189), Expect = 1.079e-13
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 1
Query:  136 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 447
            + V VL  DS +  V    K  L+EFYAPWCGHCKKLAP  +++  S++    V+IAK D          + V GYPT+ +F   S +   YEG R  E + +++
Sbjct:   23 DDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYV 126          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17
Identity = 48/112 (42.86%), Postives = 66/112 (58.93%), Query Frame = 1
Query:  151 LVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKE 480
            L+  +  D+V  SGK  L+EF+APWCGHCK LAP+ +E+A + +   D V IAK DA A    G  F VQG+PT+ FF   S + V Y+G R  + + +FI       A K+
Sbjct:   25 LIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKGGRDLDSLSNFIAEKTGVKARKK 136          

HSP 2 Score: 74.3294 bits (181), Expect = 9.136e-13
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  193 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATA--NDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 447
            KNVL+ F APWCGHCK LAP  +++A ++ +D ++ IAK DA A         + V G+PT+ FF   S     Y G R++ D+V F+
Sbjct:  159 KNVLVAFTAPWCGHCKNLAPTWEKLAATFASDPEITIAKVDADAPTGKKSAAEYGVSGFPTIKFFPKGSTTPEDYNGGRSEADLVKFL 246          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDILT_RAT (Protein disulfide-isomerase-like protein of the testis OS=Rattus norvegicus GN=Pdilt PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.681e-17
Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1
Query:   37 NLDADQIAPWVKEYKEGKVPPFRKSEPIPEE-NNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR---SASGKTVPYEGDRTKEDIVDFIENN 456
            N+  + +  +   +        + SE IP+  + EPVK LV  +   +VF+  K+V + FYAPW   C+ L P+L+E+ + YQN + V+IAK D TANDI       + YP  FFR   + S + V Y+G+ T +   DF+E++
Sbjct:  350 NITFESLKKFCNSFLSRTAKKHKSSEEIPKYWDQEPVKKLVGKNFNVVVFDKEKDVFVMFYAPWSEKCRVLLPLLEELGIKYQNHSTVIIAKIDITANDI--QLANPEQYP--FFRLFPTDSQEAVMYKGEHTMKGFCDFLESH 489          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDIA6_MEDSA (Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.681e-17
Identity = 48/122 (39.34%), Postives = 71/122 (58.20%), Query Frame = 1
Query:  142 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI-ENNRDKAAPKETVKEESG 501
            V VL  ++  ++V +  K+VL+EFYAPWCGHCK LAPI ++VA  ++++ DVVIA  DA       + ++V G+PT+ FF   +     Y G R  +D V FI E +      K  +  E+G
Sbjct:  149 VVVLTPETFNEVVLDGTKDVLVEFYAPWCGHCKSLAPIYEKVAAVFKSEDDVVIANLDADKYRDLAEKYDVSGFPTLKFFPKGNKAGEDYGGGRDLDDFVAFINEKSGTSRDAKGQLTSEAG 270          

HSP 2 Score: 76.2554 bits (186), Expect = 2.404e-13
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  136 EPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 447
            + V VL  ++ +  V +  K  L+EFYAPWCGHCKKLAP  +++  S++    V+IAK D   +      + V GYPT+ +F   S +   +EG RT E + +F+
Sbjct:   29 DDVVVLTEENFEKEVGHD-KGALVEFYAPWCGHCKKLAPEYEKLPNSFKKAKSVLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKFEGPRTAESLAEFV 132          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: TIGA_ASPNG (Protein disulfide-isomerase tigA OS=Aspergillus niger GN=tigA PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.506e-15
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  151 LVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEES 498
            LV  +  D+V  SGK  L+EF+APWCGHCK LAP+ +E+  ++ + +D V + K DA  +   G  F VQG+PT+ +F   S +   Y+G R  E +  FI + +    P+   KE S
Sbjct:   24 LVPKNFDDVVLKSGKPALVEFFAPWCGHCKNLAPVYEELGQAFAHASDKVTVGKVDADEHRDLGRKFGVQGFPTLKWFDGKSDEPEDYKGGRDLESLSSFI-SEKTGVKPRGPKKEPS 140          

HSP 2 Score: 81.6481 bits (200), Expect = 5.722e-15
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 1
Query:   10 NDGQKYLKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNEPVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFE--VQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 447
            +D  +  K   D + ++ ++ E K G  P   K EP   E       ++ D+          +VL+ F APWCGHCK LAP  + +A  +  + +VVIAK DA A +      E  V GYPT+ FF   S ++VPYEG R+++  +DF+
Sbjct:  105 SDEPEDYKGGRDLESLSSFISE-KTGVKPRGPKKEPSKVE-------MLNDATFKGAVGGDNDVLVAFTAPWCGHCKNLAPTWEALANDFVLEPNVVIAKVDADAENGKATAREQGVSGYPTIKFFPKGSTESVPYEGARSEQAFIDFL 245          
The following BLAST results are available for this feature:
BLAST of CX047412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PDI_ALTAL3.700e-2249.53Protein disulfide-isomerase (Fragment) OS=Alternar... [more]
PDIA2_HUMAN1.077e-2139.29Protein disulfide-isomerase A2 OS=Homo sapiens GN=... [more]
PDI_YEAST4.091e-2139.44Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
PDIA2_PONAB9.115e-2139.68Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
EUG1_YEAST1.008e-1938.82Protein disulfide-isomerase EUG1 OS=Saccharomyces ... [more]
PDIA6_ARATH2.932e-1935.36Probable protein disulfide-isomerase A6 OS=Arabido... [more]
ERP38_NEUCR2.101e-1742.86Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]
PDILT_RAT4.681e-1735.42Protein disulfide-isomerase-like protein of the te... [more]
PDIA6_MEDSA4.681e-1739.34Probable protein disulfide-isomerase A6 OS=Medicag... [more]
TIGA_ASPNG1.506e-1538.98Protein disulfide-isomerase tigA OS=Aspergillus ni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A08-B15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047412 ID=CX047412; Name=CX047412; organism=Citrus sinensis; type=EST; length=826bp
ATTCAGACTAATGATGGGCAGAAGTATTTGAAGCCGAACTTGGATGCCGA
TCAGATTGCACCTTGGGTGAAGGAATACAAGGAAGGCAAGGTTCCCCCAT
TCAGAAAGTCTGAGCCTATCCCTGAAGAGAACAACGAGCCTGTGAAAGTG
CTTGTTGCTGACAGCCTTCAGGACATGGTTTTCAACTCTGGAAAAAATGT
TTTGCTCGAGTTTTACGCTCCTTGGTGTGGACACTGCAAAAAGTTGGCTC
CAATCTTGGATGAAGTTGCTGTCTCATATCAAAACGATGCTGATGTTGTT
ATTGCAAAATTTGATGCAACCGCAAATGATATTCCTGGTGACACTTTTGA
AGTCCAAGGTTACCCAACCGTGTTCTTCCGATCTGCTAGTGGAAAGACAG
TGCCCTATGAGGGGGATAGGACCAAAGAAGATATTGTTGACTTCATTGAA
AATAACAGGGACAAAGCTGCCCCCAAGGAAACTGTAAAAGAGGAATCTGG
AAAAGATGAGCTCTAAGAAGGAATGGGTGCGAGTTTATTAGAGAGCCGTG
CACATAGTCGGTTGGCGCGTGTTTGGCGGATGTTATACCAAAACTATCAG
TGTCGACAAAACAATGCCTGATGTTCTCCTCCCCCTTGTCCTATATCCCC
CCTTATAGCTTTTTCTTAGGCCATTTCCCTTTACAGATCTGTTCTGTTCC
CGTGAATAAAATGGGGAGGCATTTTCGGCATTTGTAGCTGCAGTACTTTT
TGGTATTCGCATAGTTGTGATATTTTAGTATTTTCGGCGCCTAGGAGTAA
CTTACTGCGTGTTAAATCCGAAATGG
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