CX047412

Overview
NameCX047412
Unique NameCX047412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDILT_MOUSE (Protein disulfide-isomerase-like protein of the testis OS=Mus musculus GN=Pdilt PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.569e-15
Identity = 51/155 (32.90%), Postives = 86/155 (55.48%), Query Frame = 1
Query:    7 TNDGQ-KYLKPNLDADQIAPWVKEYKEGKVPPFRKSEPIPEENNE-PVKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR---SASGKTVPYEGDRTKEDIVDFIENN 456
            ++DG+ K    +++ + +  +   +        + SE IP+  ++ PVK LV  +   +V +  K+V + FYAPW   C+ L P+L+E+ + YQN + V+IAK D TANDI       + YP  FFR   + S + V Y+G+ T +   DF+E++
Sbjct:  339 SSDGRYKMPTDDINFESLKKFCNSFLSKTAKKHKASEEIPKYWDQGPVKKLVGKNFNVVVLDKEKDVFVMFYAPWSEKCRVLLPLLEELGIKYQNHSTVIIAKIDITANDI--QLANPEQYP--FFRLFPTDSQEAVMYKGEHTMKGFCDFLESH 489          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDILT_HUMAN (Protein disulfide-isomerase-like protein of the testis OS=Homo sapiens GN=PDILT PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.473e-15
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 1
Query:  103 RKSEPIPEENNEP-VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR---SASGKTVPYEGDRTKEDIVDFIENN 456
            + SE IP+  ++  VK LV  +   +VF+  K+V + FYAPW   CK L P+L+E+   YQN + ++IAK D TANDI      +  YP  FFR   S S + V Y+G+ T +   DF+E++
Sbjct:  375 QSSEEIPKYWDQGLVKQLVGKNFNVVVFDKEKDVFVMFYAPWSKKCKMLFPLLEELGRKYQNHSTIIIAKIDVTANDI--QLMYLDRYP--FFRLFPSGSQQAVLYKGEHTLKGFSDFLESH 492          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDILT_MACFA (Protein disulfide-isomerase-like protein of the testis OS=Macaca fascicularis GN=PDILT PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.709e-14
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1
Query:  103 RKSEPIPEENNEP-VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFR---SASGKTVPYEGDRTKEDIVDFIEN 453
            + SE IP+  ++  VK LV  +   +VF+  K+V + FYAPW   CK L P+L+E+   YQN + ++IAK D TANDI      +  YP  FFR   + S + V Y+G+ T +   DF+E+
Sbjct:  375 QSSEEIPKHWDQGLVKQLVGKNFNIVVFDKEKDVFVMFYAPWSKKCKMLFPLLEELGRKYQNHSTIIIAKIDITANDI--QLVYLDRYP--FFRLFPTDSQQAVLYKGEHTLKGFSDFLES 491          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDI2_SCHPO (Protein disulfide-isomerase C17H9.14c OS=Schizosaccharomyces pombe GN=SPAC17H9.14c PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.327e-14
Identity = 46/140 (32.86%), Postives = 76/140 (54.29%), Query Frame = 1
Query:  139 PVKVLVADSLQ--DMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFI-ENNRDKAAPKETVKEESGKDEL*EGMGASLLE 543
            P  V+  DSL    +V +  K+VL+EFYA WCG+CK+LAP  + +   ++N+ +V I K +A      G   EV  +PT+ F     K  P  YEGDR+ E ++++I + +  + +P  T+   +G+    +   A  L+
Sbjct:  139 PSNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSGTQRSPDGTLLSTAGRIPTFDEFAAEFLD 278          

HSP 2 Score: 76.2554 bits (186), Expect = 2.404e-13
Identity = 34/103 (33.01%), Postives = 58/103 (56.31%), Query Frame = 1
Query:  142 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPT-VFFRSASGKTVPYEGDRTKEDIVDFI 447
            V++   + L++ +  S K  L+EFYA WCGHCK LAP+ +E+   +++  DV+I K DA  +    D + + G+PT ++F     + V Y   R  + +  F+
Sbjct:   23 VELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSLTQFV 125          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDI1_DICDI (Protein disulfide-isomerase 1 OS=Dictyostelium discoideum GN=pdi1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.404e-13
Identity = 41/102 (40.20%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  151 LVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPG--DTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 447
            L   +   +V +  KNVL+EFYAPWCGHCKKL P  + +  +Y N+ DVVIAK D  A D       + V G+PT+ +F   S     YE  R  +  +++I
Sbjct:  147 LSPSNFDSVVLDKSKNVLVEFYAPWCGHCKKLMPDYEILGNTYANEKDVVIAKIDCDAADNKAICSKYGVTGFPTLKWFGKQSKDGEKYEQGRDLDTFINYI 248          

HSP 2 Score: 71.2478 bits (173), Expect = 7.734e-12
Identity = 45/123 (36.59%), Postives = 66/123 (53.66%), Query Frame = 1
Query:  142 VKVLVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDAD-VVIAKFDATANDIPG--DTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENN-----RDKAAPKETV 486
            V VL  D+  D V +  K V ++FYAPWCGHCKKLAP  + +A ++   ++ VVIAK D    D       ++V GYPT+     S     Y G R+ ++++ +I N+     + K AP   V
Sbjct:   24 VVVLSPDNF-DTVVDGSKTVFVKFYAPWCGHCKKLAPDFEILADTFAPVSNKVVIAKVDCDQADNKALCSKYDVSGYPTLKIFDKSTTAKDYNGARSVDELLTYINNHAKTNVKVKKAPSNVV 145          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: TMX3_XENLA (Protein disulfide-isomerase TMX3 OS=Xenopus laevis GN=tmx3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.140e-13
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 1
Query:  139 PVKVLVADSLQDMVFNSGKNV-LLEFYAPWCGHCKKLAPILDEVAVSYQNDADVV-IAKFDATANDIPGDTFEVQGYPTVFFRSASG-KTVPYEGDRTKEDIVDF 444
            PV  LV D       N   ++ L++FYAPWCGHCKKL P+ +EV +  +     + + K DAT        F V+G+PT+  ++  G     Y G RTKEDIV+F
Sbjct:   23 PVSALVEDLDDSFKENRKDDIWLVDFYAPWCGHCKKLEPVWNEVGIEIRTSGSPIRVGKIDATVYSSIASEFGVRGFPTI--KALKGDMAYNYRGPRTKEDIVEF 125          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: SEP2_EMIHU (Protein disulfide-isomerase-like protein EhSep2 OS=Emiliania huxleyi GN=SEP2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 1
Query:  151 LVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIP-GDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIEN 453
            L  D+  ++V  SGK   ++F APW GHCKK+ P  D +A ++++   V+IA  D T    P  + + V+GYPT+ +F     +   Y+G R+ +++  F EN
Sbjct:   22 LTPDNFDELVLKSGKAAFIKFLAPWUGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPLCEKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAEN 124          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDIA6_PONAB (Protein disulfide-isomerase A6 OS=Pongo abelii GN=PDIA6 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 43/124 (34.68%), Postives = 58/124 (46.77%), Query Frame = 1
Query:  151 LVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVA--VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIV----DFIENNRDKAAPKETVKEESGK 504
            L  DS    V +S    ++EFYAPWCGHCK L P     A  V  Q    V +A  DAT N +    + ++G+PT+         V Y+G RT+ DIV    D   +N       E + E+  K
Sbjct:  165 LTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIISEDIAK 288          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: PDIA6_HUMAN (Protein disulfide-isomerase A6 OS=Homo sapiens GN=PDIA6 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 43/124 (34.68%), Postives = 58/124 (46.77%), Query Frame = 1
Query:  151 LVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVA--VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIV----DFIENNRDKAAPKETVKEESGK 504
            L  DS    V +S    ++EFYAPWCGHCK L P     A  V  Q    V +A  DAT N +    + ++G+PT+         V Y+G RT+ DIV    D   +N       E + E+  K
Sbjct:  165 LTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAK 288          
BLAST of CX047412 vs. ExPASy Swiss-Prot
Match: TMX3_MOUSE (Protein disulfide-isomerase TMX3 OS=Mus musculus GN=Tmx3 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.035e-12
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 1
Query:  202 LLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDF 444
            L++FYAPWCGHCKKL PI +EV +  ++  + V + K DAT+       F V+GYPT+           Y G RTK+DI++F
Sbjct:   48 LVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGD-LAYNYRGPRTKDDIIEF 128          
The following BLAST results are available for this feature:
BLAST of CX047412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PDILT_MOUSE2.569e-1532.90Protein disulfide-isomerase-like protein of the te... [more]
PDILT_HUMAN7.473e-1540.16Protein disulfide-isomerase-like protein of the te... [more]
PDILT_MACFA3.709e-1439.67Protein disulfide-isomerase-like protein of the te... [more]
PDI2_SCHPO6.327e-1432.86Protein disulfide-isomerase C17H9.14c OS=Schizosac... [more]
PDI1_DICDI2.404e-1340.20Protein disulfide-isomerase 1 OS=Dictyostelium dis... [more]
TMX3_XENLA3.140e-1340.00Protein disulfide-isomerase TMX3 OS=Xenopus laevis... [more]
SEP2_EMIHU1.193e-1234.95Protein disulfide-isomerase-like protein EhSep2 OS... [more]
PDIA6_PONAB1.193e-1234.68Protein disulfide-isomerase A6 OS=Pongo abelii GN=... [more]
PDIA6_HUMAN1.193e-1234.68Protein disulfide-isomerase A6 OS=Homo sapiens GN=... [more]
TMX3_MOUSE2.035e-1243.90Protein disulfide-isomerase TMX3 OS=Mus musculus G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_14A08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A08-B15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047412 ID=CX047412; Name=CX047412; organism=Citrus sinensis; type=EST; length=826bp
ATTCAGACTAATGATGGGCAGAAGTATTTGAAGCCGAACTTGGATGCCGA
TCAGATTGCACCTTGGGTGAAGGAATACAAGGAAGGCAAGGTTCCCCCAT
TCAGAAAGTCTGAGCCTATCCCTGAAGAGAACAACGAGCCTGTGAAAGTG
CTTGTTGCTGACAGCCTTCAGGACATGGTTTTCAACTCTGGAAAAAATGT
TTTGCTCGAGTTTTACGCTCCTTGGTGTGGACACTGCAAAAAGTTGGCTC
CAATCTTGGATGAAGTTGCTGTCTCATATCAAAACGATGCTGATGTTGTT
ATTGCAAAATTTGATGCAACCGCAAATGATATTCCTGGTGACACTTTTGA
AGTCCAAGGTTACCCAACCGTGTTCTTCCGATCTGCTAGTGGAAAGACAG
TGCCCTATGAGGGGGATAGGACCAAAGAAGATATTGTTGACTTCATTGAA
AATAACAGGGACAAAGCTGCCCCCAAGGAAACTGTAAAAGAGGAATCTGG
AAAAGATGAGCTCTAAGAAGGAATGGGTGCGAGTTTATTAGAGAGCCGTG
CACATAGTCGGTTGGCGCGTGTTTGGCGGATGTTATACCAAAACTATCAG
TGTCGACAAAACAATGCCTGATGTTCTCCTCCCCCTTGTCCTATATCCCC
CCTTATAGCTTTTTCTTAGGCCATTTCCCTTTACAGATCTGTTCTGTTCC
CGTGAATAAAATGGGGAGGCATTTTCGGCATTTGTAGCTGCAGTACTTTT
TGGTATTCGCATAGTTGTGATATTTTAGTATTTTCGGCGCCTAGGAGTAA
CTTACTGCGTGTTAAATCCGAAATGG
back to top