CX047405

Overview
NameCX047405
Unique NameCX047405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.267e-35
Identity = 83/211 (39.34%), Postives = 116/211 (54.98%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTMVS 858
            K QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC          T + GC GG MT A++Y+   GG++ E +YPY+G+   C +++   A +   +  IPV +E  +   +   GP+++ ++A     Q Y  GV     C +  +NH VL+VGYG +  S         WIIKNSWG+ WG+ GY  L R +   CG+  M S
Sbjct:  131 KNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC---------VTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGS-------KHWIIKNSWGESWGNKGYALLARNKNNACGITNMAS 325          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.984e-35
Identity = 79/200 (39.50%), Postives = 110/200 (55.00%), Query Frame = -3
Query:  268 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLV-HHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR 858
            K QG CGSCWAFS   A+EGA+F+ TG+L+SLSEQ LVDC  S         + GC+GG    AY+Y+IA  G++ ESSYPY      C++D+  I   V+++      +     H V + GP+++ ++A      +Y GGV     C   + NH V  VGYG             +WI+KNSWG  WG+ GY ++ R R
Sbjct:  122 KDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYG-------NQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYIKMARNR 308          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 8.984e-35
Identity = 81/211 (38.39%), Postives = 122/211 (57.82%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLV-HHGPLAIGLNAIFMQ--TYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRG-MCGMNTMVS 858
            K QG+CG+CWAFS  GA+E    + TG L+SLS Q LVDC      ++ G  + GC+GG MT A++Y+I   G++ ++SYPY     KCQ+DS+  A   + +T +P     +    V + GP+++G++A       Y  GV     C +  +NHGVL+VGYG        L  + +W++KNSWG  +G+ GY R+ R +G  CG+ +  S
Sbjct:  131 KYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS----TEKYG--NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQN-VNHGVLVVGYG-------DLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPS 327          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.001e-34
Identity = 84/211 (39.81%), Postives = 113/211 (53.55%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVD-ENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRG-RGMCGMNTMVS 858
            K QG CGSCWAFS+ GA+EG     TG LLSLS Q LV C  +         +NGC GG MTNA++Y+    G++ E +YPYIG+   C +     A +   +  IP D E  +   +   GP+++G++A     Q Y  GV     C  + +NH VL VGYGA+            WIIKNSWG +WG+ GY  L R  +  CG+  + S
Sbjct:  136 KDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYCVSN---------NNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQ-------KGTKHWIIKNSWGTEWGNKGYVLLARNMKQTCGIANLAS 330          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34
Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = -3
Query:  247 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRG-RGMCGMNT 858
            K QG C S WAFS TG++EG  F  T  L+ LSEQ L+DC  S          +GCSGG M  A++Y+   GGL  E SYPY G+  +C++ +E  A  V +F  IP  E  +   +   GP+++ ++A     Q Y  G+     C +  LNH VL+VGYG +G          FW++KNSWG++WG  GY +L +     CG+ T
Sbjct:  130 KNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGS-------NVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEG---EESDGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIAT 326          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34
Identity = 76/213 (35.68%), Postives = 117/213 (54.93%), Query Frame = -3
Query:  229 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEK--IAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGRGMCGM-NTMVSAVV 858
            K QGACG+CWAF+T  +VE    +    L+ LSEQQL+DCD         + D GC+GGL+  A++ ++  GG++ E  YP++G+  +C  D  +  +   V  +  + V+E ++   L   GP+ + ++A  +  Y  GV     C    LNH VLLVGYG +          P+W+ KN+WG  WG++GY+R+ +    CGM N + S  V
Sbjct:  160 KNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISS--CENNGLNHAVLLVGYGVE-------NGVPYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAV 354          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34
Identity = 85/222 (38.29%), Postives = 121/222 (54.50%), Query Frame = -3
Query:  214 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKI-AVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRG----RGMCGMNTMVSAVVTQASS 858
            K QG CGSCWAFST  AVEG N I T  L+SLSEQ+LVDCD           + GC+GGLM  A++++   GG+  E++YPY    G C    E   AV +    N+P ++       V + P+++ ++A     Q Y  GV     CG + L+HGV +VGYG        +    +W +KNSWG +WG+ GY R+ RG     G+CG+    S  + ++S+
Sbjct:  142 KDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-SCGTE-LDHGVAIVGYGT------TIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSN 347          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34
Identity = 82/211 (38.86%), Postives = 117/211 (55.45%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTMVS 858
            K QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG      ++ GN+  WIIKNSWG+ WG+ GY  + R +   CG+  + S
Sbjct:  131 KNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG------IQKGNK-HWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34
Identity = 82/211 (38.86%), Postives = 117/211 (55.45%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTMVS 858
            K QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG      ++ GN+  WIIKNSWG+ WG+ GY  + R +   CG+  + S
Sbjct:  131 KNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG------IQKGNK-HWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325          
BLAST of CX047405 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34
Identity = 82/211 (38.86%), Postives = 117/211 (55.45%), Query Frame = -3
Query:  238 KMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPFWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTMVS 858
            K QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG      ++ GN+  WIIKNSWG+ WG+ GY  + R +   CG+  + S
Sbjct:  131 KNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG------IQKGNK-HWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 325          
The following BLAST results are available for this feature:
BLAST of CX047405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
CATK_MOUSE5.267e-3539.34Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CRUST_PANBO8.984e-3539.50Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATS_HUMAN8.984e-3538.39Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATK_CHICK2.001e-3439.81Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
TEST2_RAT2.614e-3439.13Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATV_NPVLD4.459e-3435.68Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CYSEP_RICCO5.823e-3438.29Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CATK_MACMU5.823e-3438.86Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA5.823e-3438.86Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN5.823e-3438.86Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047405 ID=CX047405; Name=CX047405; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTTTTTTTTTTTTAGAAGAGCAGGTCTGAAAAGCATTTTCAACTCT
AATCCAGAACTTACTTGAGAAAAGGGAATTATGAAACCGGAAAAGCTTCA
ATAATTAGAAGATCACGAACAAGAACAAAAGGGAAACTAGCTACCATTTA
ACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACTTAATAAGAGG
GACTTCAAGTTTAGGAGGAGGCTTGAGTGACCACTGCAGAAACCATGGTG
TTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAGTACCCATGGTC
TCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAAAACGGCTGGTTTC
CAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGACAAGCAGAACG
CCGTGGTTGAGCCATTTCTTGCCGCAGATTAGGGGGCATGAGACTCCCCC
AATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCCAGAGGACCGT
GGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGGAATATTGGTA
AAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATTGGCATTTGCC
ACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGCCCTCCAGCCG
CGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGAACAACCATTG
TCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCACAATCTACAAG
CTGCTGCTCGCTAAGACTCAGAAGATTCCCAGTCGCAATGAAGTTGGCTC
CTTCAACAGCTCCTGTAGTGCTAAAAGCCCAGCATGACCCACATGCTCCC
TGCATCTTGA
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