CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.407e-35
Identity = 81/200 (40.50%), Postives = 114/200 (57.00%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            N F  +M  ++KSY T E++  R  IF  NM    +        V G+  F+D++ EE+ + Y G K      D   L  +  + +       + DWR +GAVT VK QG CG CW+FSTTG+ EGA+F + G L+SLSEQ L+DC          T ++GC GGLMT A++Y+I   G++ ESSYPY  + GKC++ SE
Sbjct:   28 NAFTDWMITHQKSY-TSEEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTK-----FDASSLIGTQEEKVFTTSSAASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDC---------STENSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCEYKSE 212          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.295e-34
Identity = 84/213 (39.44%), Postives = 127/213 (59.62%), Query Frame = 3
Query:  138 LLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGL---PENFDWRDKG-AVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEK 764
            L + +  + +F  +M++++K+Y++RE Y HRL +FA N  +   H   + T   G+  FSD+S  E +  Y   +   P+        S+ K   + G    P + DWR KG  V+ VK QGACGSCW FSTTGA+E A  IA+G +++L+EQQLVDC  + +       ++GC GGL + A++Y++   G+  E SYPYIGK G+C+F+ EK
Sbjct:   23 LTVNAIEKFHFTSWMKQHQKTYSSRE-YSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSE---PQ------NCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEK 218          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.208e-34
Identity = 84/217 (38.71%), Postives = 117/217 (53.92%), Query Frame = 3
Query:  132 GHLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAA--GGLEEESSYPYI---GKRGKCQFDSEKI 767
            G L +  + E  F  F +KY K Y   ++   R   F +NM +A      +P A  GVTPFSD++ EEF + Y   + G                +     P   DWR+KGAVT VK+QG CGSCWAFST G +EG   +A   L+SLSEQ LV CD         T D+GC+GGLM NA+ +++ +  G +  E+SYPY+   G++ +CQ +  +I
Sbjct:   29 GSLHVEESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARY---RNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEI 233          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.884e-34
Identity = 80/173 (46.24%), Postives = 103/173 (59.54%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            R  IF  N+    EH   + +   G+T F+DL+ +E+ S Y G K    E  G    S   +    D LPE+ DWR KGAV EVK QG CGSCWAFST GAVEG N I TG+L++LSEQ+LVDCD S         + GC+GGLM  A++++I  GG++ +  YPY G  G C
Sbjct:   72 RFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAK---MEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTS--------YNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTC 233          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.919e-34
Identity = 84/211 (39.81%), Postives = 122/211 (57.82%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPE---NFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATG--NLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRG-KCQFDSEKIAVR 776
            N F  +M  +++ Y++ E++  R  IF  NM    E        V G+  F+D+S EE+ + Y G             ++SS++M E D + +     DWR +GAVT +K QG CG CW+FSTTGA EGA ++A G  NL+SLSEQ L+DC  S         +NGC GGLMT A++Y+I   G++ ESSYPY  + G KC+F+ + +A +
Sbjct:   28 NAFTNWMIAHQRHYSS-EEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGTP----------FDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYG-------NNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQ 220          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.096e-33
Identity = 80/200 (40.00%), Postives = 107/200 (53.50%), Query Frame = 3
Query:  186 KYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            ++ KSY    +   R   F  N+    EH       VH    G+  F+DL+ EE+   Y G++  P         S      + + LPE+ DWR KGAV E+K QG CGSCWAFS   AVEG N I TG+L+SLSEQ+LVDCD S         + GC+GGLM  A+ ++I  GG++ E  YPY GK  +C  + +   V
Sbjct:   46 EHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERK---VSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTS--------YNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKV 234          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.189e-33
Identity = 83/215 (38.60%), Postives = 112/215 (52.09%), Query Frame = 3
Query:  144 LGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLI--AAGGLEEESSYPYIGKRG---KCQFDSEKIAV 773
            +G+     F+ F + Y ++Y T  +   RL  F +N+    EHQ  +P A  G+T F DLSE EF + Y               +       ++  +P+  DWR+KGAVT VK QGACGSCWAFS  G +EG  ++A   L+SLSEQQLV CD   D         GC GGLM  A+ +L+    G L  E SYPY+   G   +C   SE++ V
Sbjct:   30 VGTPAAALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVV 235          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.164e-33
Identity = 82/211 (38.86%), Postives = 118/211 (55.92%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTG-------MKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATG--NLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKI 767
            N F  +M  +++ Y++ E++  R  IF  NM    E        V G+  F+D++ EE+ + Y G       ++  P E   GG++++SV            DWR KGAVT +K QG CG CW+FS TGA EGA +IA G  +L S+SEQQL+DC  S         +NGC GGLMT A++Y+I  GG++ ESSYP+     KC+++   I
Sbjct:   28 NAFTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDASSLEMTPSEKVFGGVQANSV------------DWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYG-------NNGCEGGLMTLAFEYIINNGGIDTESSYPFTANTEKCKYNPSNI 218          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 7.103e-33
Identity = 77/181 (42.54%), Postives = 101/181 (55.80%), Query Frame = 3
Query:  216 DYVHRLGIFAKNMIRAAEHQLLDPTAVH--GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG--LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            D   R  IF  N+     H   +  A +  G+T F+DL+ +E+  +Y G +  P          +      ++G  +PE  DWR KGAV  +K QG CGSCWAFSTT AVEG N I TG L+SLSEQ+LVDCD S         + GC+GGLM  A+++++  GGL  E  YPY G  GKC
Sbjct:   69 DQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKS--------YNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKC 241          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33
Identity = 78/215 (36.28%), Postives = 114/215 (53.02%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEI----------DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            ++ F+ F+  Y K Y   +   +R  IF +N+    E   L+ +A++ +  FSDLS+ E  + YTG+    P      +  S+     +          D LP+NFDWR    +T VK QGACGSCWA +  G +E    I    L++LSEQQL+DCD         + +  C GGLM  A++ L+ AGGL EE  YPY G +G C+ D++K A+
Sbjct:   29 QHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPS----NMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVCKIDNKKFAL 230          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CYSP5_DICDI3.407e-3540.50Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATH_RAT1.295e-3439.44Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CYSP_TRYBB2.208e-3438.71Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
RD21A_ARATH2.884e-3446.24Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSP7_DICDI4.919e-3439.81Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
ORYA_ORYSJ1.096e-3340.00Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP2_LEIPI3.189e-3338.60Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CYSP6_DICDI4.164e-3338.86Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
GCP1_ARATH7.103e-3342.54Germination-specific cysteine protease 1 OS=Arabid... [more]
CATV_NPVAH9.277e-3336.28Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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