CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.695e-26
Identity = 70/204 (34.31%), Postives = 111/204 (54.41%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            + +++++ + + K Y  + D + R  I+ KN+   + H L     VH     +    D++ EE     TG+K            + ++ + E +G  P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++
Sbjct:   23 DTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH----SRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN 213          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 57/110 (51.82%), Postives = 69/110 (62.73%), Query Frame = 3
Query:  435 PENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEK 764
            PE+ DWRDKGAVT VK Q  CGSCWAFST   VEG N I TG L+SLSEQ+L+DCD            +GC GG  T + +Y+   GG+  E  YPY  K+GKC+   +K
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR---------SHGCKGGYQTGSIQYVADNGGVHTEKEYPYEKKQGKCRAKEKK 102          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 71/209 (33.97%), Postives = 109/209 (52.15%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPEN----FDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            N F+ F+ ++ K Y +  + + R  IF  N+         D +A + +  FSDLS++E  + YTG+   P +        +  K++ +D  P      FDWR    VT VK QG CG+CWAF+T  ++E    I    L++LSEQQ++DCD           D GC+GGL+  A++ +I  GG++ ES YPY      C+ +S K  V+
Sbjct:   26 NYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLSL-PIQTQ------NFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQ 217          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.891e-26
Identity = 57/107 (53.27%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  426 DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            D LP++ DWR+KGAV  VK QG CGSCWAF    AVEG N I TG+L+SLSEQQLVDC          T ++GC GG    A++Y+I  GG+  E  YPY G  G C
Sbjct:    1 DVLPDSIDWREKGAVVPVKNQGGCGSCWAFDAIAAVEGINQIVTGDLISLSEQQLVDC---------STRNHGCEGGWPYRAFQYIINNGGINSEEHYPYTGTNGTC 98          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.891e-26
Identity = 69/208 (33.17%), Postives = 104/208 (50.00%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSV-KMMEIDG----LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            ++ F++++ K Y T +        F +N+        +   AV+G+  FSD+ +  F + + G+            +   + + + + G     PE+FDWR    VT+VK QG CGSCWAF+  G +E    I   +L+ LSEQQL+DCD           D GC GGLM  A++ +I  GG+E E  YPY G    C+    K+AVR
Sbjct:   33 YENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR---------VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYACRLAPSKLAVR 231          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.891e-26
Identity = 70/180 (38.89%), Postives = 90/180 (50.00%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVHGVT----PFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            R  ++ KNM     H        H  T     F D++ EEF  +  G +   P       E    +       P + DWR+KG VT VK QG CGSCWAFS TGA+EG  F  TG L+SLSEQ LVDC            + GC+GGLM  A++Y+   GGL+ E SYPY      C+++
Sbjct:   48 RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEA------PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGP-------QGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN 214          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.775e-26
Identity = 73/196 (37.24%), Postives = 102/196 (52.04%), Query Frame = 3
Query:  186 KYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVT----PFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            KY KSY+  E+ + R  ++ +N+     H   +    +G T     F+D + EEF    + +      +       S+ K + I GLP   DWR +G VT V+ QG CGSCWAF+  GA+EG  F  TGNL  LS Q L+DC        K   +NGC  G    A+ Y++   GLE E++YPY GK G C++ SE
Sbjct:   35 KYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDIL-----IPAAVTNPSAQKQVSI-GLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDC-------SKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKDGPCRYHSE 216          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.775e-26
Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAE--HQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDS 758
            F+ +M +Y + Y   ++ + R  IF KN ++  E  +   + +   G+  F+D+++ EF + YTG+   P  ++   + S     + I  +P++ DWRD GAV EVK Q  CGSCW+F+    VEG   I TG L+SLSEQ+++DC              GC GG +  AY ++I+  G+  E +YPY+  +G C  +S
Sbjct:   37 FEEWMAEYGRVYKDDDEKMRRFQIF-KNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSL-PLNIEREPVVSFDD--VNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDC----------AVSYGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNANS 221          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 74/210 (35.24%), Postives = 111/210 (52.86%), Query Frame = 3
Query:  141 LLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVT----PFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            +L S+ +  ++ +  KY KSY+ +E+ + R+ ++ + +     H   +    +G T     F D ++EEF  M   +            E  S+   E    LP+  DWR KG VT V+ QG C +CWAF+ TGA+E      TG L  LS Q LVDC      K +G  +NGC GG   NA++Y++  GGLE E++YPY GK G C+++
Sbjct:   20 VLDSSLDAEWQDWKIKYNKSYSLKEEKLKRV-VWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHR------EGKSIMKREAGSILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCS-----KPQG--NNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYN 215          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 3
Query:  312 FSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            F D++ EEF  +   M G   +    G +     + EI   P + DWR+KG +T VK QG CGSCWAFS TGA+EG  F  TG L+SL+EQ LVDC            + GC+GG M N ++Y+   GGL+ E+SYPY GK   C+++
Sbjct:   23 FGDMTNEEFRQV---MNGFQYQKHRKGKQFQERLLPEI---PTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGP-------QGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYN 157          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATK_HUMAN1.695e-2634.31Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
MEX2_JACME2.213e-2651.82Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATV_NPVAC2.213e-2633.97Viral cathepsin OS=Autographa californica nuclear ... [more]
CPGP1_ZINOF2.891e-2653.27Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATV_NPVST2.891e-2633.17Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATL1_HUMAN2.891e-2638.89Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATJ_RAT3.775e-2637.24Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
BROM1_ANACO3.775e-2634.17Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATR_MOUSE4.931e-2635.24Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL6_HUMAN4.931e-2643.24Putative cathepsin L-like protein 6 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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