CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-15
Identity = 57/200 (28.50%), Postives = 92/200 (46.00%), Query Frame = 3
Query:  153 ATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG--LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            A+   F+ F + + K+YAT E    +  +  KN + + ++   +  A++ +   SDLS +EF++ +        ++      ++      I+   LP   D R    VT ++MQG CGSCWAFS   + E A        L L+EQ+LVDC             NGC G  +    +Y I   G+ +E  YPY+ +   C
Sbjct:   21 ASIKTFEEFKKAFNKTYATPE----KEEVARKNFLESLKYVESNKGAINHL---SDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVSLPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC----------ASQNGCHGDTIPRGIEY-IQQNGVVQEHYYPYVAREQSC 202          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.139e-14
Identity = 57/195 (29.23%), Postives = 89/195 (45.64%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQ 749
            F+ + + + KSYAT ED         KN + + ++   +  A++ +   SDLS +EF++ +         +      ++      I+G  P   D R    VT ++MQG CGSCWAFS   A E A        L L+EQ+LVDC             +GC G  +    +Y I   G+ +ES Y Y+ +   C+
Sbjct:   26 FEEYKKAFNKSYATFEDEEAA----RKNFLESVKYVQSNGGAINHL---SDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC----------ASQHGCHGDTIPRGIEY-IQHNGVVQESYYRYVAREQSCR 202          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.027e-12
Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLL----DPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGL-----ESSSVKMMEIDG----LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNL-LSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIG 731
            + F  +M++  K Y   ++ + R   F    ++  +H  +      T V  V  +SD S+EEF++ +  +   P ++    +       ++  ++ +D      P++ D+R K      K QG CGSCWAF+  G  E         + +S SEQQ+VDC          T + GC GG    A+ Y+I   G+     YPY G
Sbjct:  160 SKFFKYMKENNKKYENMDEQLQRFENFKIRYMKTQKHNEMVGKNGLTYVQKVNQYSDFSKEEFDNYFKKLLSVPMDLKSKYIVPLKKHLANTNLISVDNKSKDFPDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDC---------STENYGCDGGNPFYAFLYMI-NNGVCLGDEYPYKG 353          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
PEPT1_EURMA2.998e-1528.50Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
PEPT1_DERPT1.139e-1429.23Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CYSP_PLAVN9.027e-1226.96Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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