CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.340e-31
Identity = 81/198 (40.91%), Postives = 107/198 (54.04%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLE---SSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCD-HSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQ 749
            F  +M K+ K Y + ++ ++R  IF  N++   E    + +   G+  F+DLS +EF+  Y G        D  GLE   +       +   P++ DWR KGAVT VK QGACGSCWAFST   VEG N I TGNLL LSEQ+LVDCD HS           GC GG  T + +Y +A  G+     YPY  K+ KC+
Sbjct:   48 FDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAE----DFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHS----------YGCKGGYQTTSLQY-VANNGVHTSKVYPYQAKQYKCR 230          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.340e-31
Identity = 89/226 (39.38%), Postives = 125/226 (55.31%), Query Frame = 3
Query:  108 IRQVTDNPGHLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNM--IRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDN-GCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            +R+V ++   +L  S    +F  F  +Y K Y   E+   R  IF +N+  IR+   + L      GV  F+DL+ +EF+      K G  +     L+ S  K+ E   LPE  DWR+ G V+ VK QG CGSCW FSTTGA+E A   A G  +SLSEQQLVDC         G  +N GC+GGL + A++Y+ + GGL+ E +YPY GK   C+F +E + V+
Sbjct:   39 LREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKL--GVNQFADLTWQEFQRT----KLGAAQNCSATLKGSH-KVTEA-ALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQ 248          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.750e-31
Identity = 79/198 (39.90%), Postives = 109/198 (55.05%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLL-DPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPY-IGKRGKCQFD 755
            ++ ++ +  K+Y    +   R  IF  N+    EH  + D T   G+T F+DL+ EEF ++Y   K    E     +++      E D LP+  DWR  GAV  VK QG CGSCWAFS  GAVEG N I TG L+SLSEQ+LVDCD       +G  + GC GG+M  A+++++  GG+E +  YPY     G C  D
Sbjct:   44 YEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKK---MERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCD-------RGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNAD 231          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.750e-31
Identity = 73/203 (35.96%), Postives = 108/203 (53.20%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            F+ F+  + K+Y+++ + +HR  IF  N+       L D +A + +  FSDLS++E  S YTG+      +         V     D  P  FDWR    VT VK QG CG+CWAF+T G++E    I    L++LSEQQL+DCD           D GC GGL+  AY+ ++  GG++ E+ YPY    G C+ ++ K  V+
Sbjct:   28 FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLS---LPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVK 218          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.285e-31
Identity = 78/208 (37.50%), Postives = 111/208 (53.37%), Query Frame = 3
Query:  123 DNPGHLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            +N  H +  +     F+ +M K+ K Y +  +   RL IF  N+         + +   G+T F+DLS  E++ +  G    PP        S   K    D LP++ DWR++GAVTEVK QG C SCWAFST GAVEG N I TG L++LSEQ L++C+           +NGC GG +  AY++++  GGL  ++ YPY    G C
Sbjct:   34 NNRLHSVFDAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVC 232          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.285e-31
Identity = 76/211 (36.02%), Postives = 116/211 (54.98%), Query Frame = 3
Query:  135 HLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            H+      ++++ ++ + Y K Y  + + V R  I+ KN+     H L     +H    G+    D++ EE  S+ + ++     +      + + K      LP++ DWR+KG VTEVK QGACGSCWAFS  GA+E    + TG L+SLS Q LVDC  +    + G  + GC+GG MT A++Y+I   G++ E+SYPY    GKCQ+D
Sbjct:   17 HVHRDPTLDHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLR-----VPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTA----KYG--NKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYD 216          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.984e-31
Identity = 80/211 (37.91%), Postives = 114/211 (54.03%), Query Frame = 3
Query:  150 SATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAE----HQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIA 770
            +A   +++ F  KY + Y   E+  +R  IF +N     E    ++  + T    +  F D++ EEF ++   MKG  P        S      E        DWR KGAVT VK QG CGSCWAFSTTG++EG +F+ TG+L+SL+EQQLVDC              GC+GG M +A+ Y+ A  G++ E++YPY  + G C+FDS  +A
Sbjct:   14 AAASPSWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAV---MKGNIPRRSAP--VSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYG-------PQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVA 212          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31
Identity = 80/205 (39.02%), Postives = 107/205 (52.20%), Query Frame = 3
Query:  165 NFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDN-GCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            +F  F  ++ K Y + E+   R  IF  N+     H     +   G+  F+DL+ +EF     G          G L+ ++V       LPE  DWR  G V+ VK QG CGSCW FSTTGA+E A   A G  +SLSEQQLVDC         G  +N GC+GGL + A++Y+   GGL+ E +YPY GK G C+F    I V+
Sbjct:   56 SFARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLKLTNVV------LPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDC--------AGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVK 246          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31
Identity = 84/217 (38.71%), Postives = 115/217 (53.00%), Query Frame = 3
Query:  138 LLLGSATEN---NFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLL----DPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKI 767
            +LLG A  +    ++ F  K+ K YA  E+  HR+ +F   +    EH       + T    +  FSDL+ EE  +  TGM      +      S   K      +  + DWR+KGAVT VK QG CGSCWAFS   A+EGA+F+ TG+L+SLSEQ LVDC  S         + GC+GG    AY+Y+IA  G++ ESSYPY      C++D+  I
Sbjct:    7 ILLGLAAVSAIGEWENFKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPL------SVLPKSAPTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYG-------NQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNCRYDAGNI 210          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31
Identity = 76/208 (36.54%), Postives = 116/208 (55.77%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIA 770
            ++++ ++ + Y K Y    + V R  I+ KN+     H L     +H    G+    D++ EE  S+   ++            S+S +      LP++ DWR+KG VTEVK QG+CG+CWAFS  GA+E    + TG L+SLS Q LVD    C  ++ G  + GC+GG MT A++Y+I   G++ E+SYPY    GKC++DS+K A
Sbjct:   25 DHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQK-----LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKKRA 221          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
PAPA2_CARPA1.340e-3140.91Chymopapain OS=Carica papaya PE=1 SV=2[more]
ALEU_ARATH1.340e-3139.38Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CPR1_ARATH1.750e-3139.90Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATV_NPVCD1.750e-3135.96Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CPR3_ARATH2.285e-3137.50Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATS_BOVIN2.285e-3136.02Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CYSP2_HOMAM2.984e-3137.91Digestive cysteine proteinase 2 OS=Homarus america... [more]
CYSP3_SOLLC5.091e-3139.02Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CRUST_PANBO5.091e-3138.71Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATS_CANFA6.648e-3136.54Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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