CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31
Identity = 78/195 (40.00%), Postives = 107/195 (54.87%), Query Frame = 3
Query:  189 YEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVT----PFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            + + Y T E+   R  ++ KNM     H        HG T     F D++ EEF  +  G +    +    G       M++I   P+  DWR+KG VT VK QG CGSCWAFS +G +EG  F+ TG L+SLSEQ LVDC H     ++G  + GC+GGLM  A++Y+   GGL+ E SYPY  K G C++ +E
Sbjct:   36 HRRLYGTNEEEWRR-AVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRH---QKHKKGRLFQEPLMLQI---PKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-----DQG--NQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAE 216          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 75/194 (38.66%), Postives = 107/194 (55.15%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQ 749
            F+ +M K+ K Y +  +   RL IF  N+         + +   G+  F+DLS  E+  +  G    PP        S+  K  + D LP++ DWR++GAVTEVK QG C SCWAFST GAVEG N I TG L++LSEQ L++C+           +NGC GG +  AY++++  GGL  ++ YPY    G C+
Sbjct:   56 FESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCE 240          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.134e-30
Identity = 73/179 (40.78%), Postives = 97/179 (54.19%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMME-IDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            R  +F  N +       +D      +  F+D++  EF + Y+G K     M  GG   +   M E +D +P + DWR KGAVT VK QG CGSCWAFST  AVEG N I T  L+SLSEQ+LVDCD           + GC+GGLM  A++++   GG+  E++YPY    G C    E
Sbjct:   57 RFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKE 227          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.134e-30
Identity = 71/197 (36.04%), Postives = 107/197 (54.31%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQL-LDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            ++ ++ KY KSY +  ++  R  IF + +    EH    + +   G+  F+DL++EEF S Y G   G  +          V  +    LP   DWR  GAV ++K QG CG CWAFS    VEG N I TG L+SLSEQ+L+DC  + + +       GC+GG +T+ ++++I  GG+  E +YPY  + G+C  D
Sbjct:   42 YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQV----LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLD 227          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.481e-30
Identity = 79/198 (39.90%), Postives = 113/198 (57.07%), Query Frame = 3
Query:  186 KYEKSYATREDYVHRLGIFAKNMIRAAE-HQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDG-GGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDN-GCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGK-CQFDSEKI 767
            K+ + Y++ E + +R  IF  NM      +   D   V G+  F+D++ EE+   Y G +      +G  G E  +V+ ++ +  P++ DWR K AVT +K QG CGSCW+FSTTG+ EGA+ + T  L+SLSEQ LVDC         G  +N GC GGLM NA+ Y+I   G++ ESSYPY  + G  C F+   I
Sbjct:   42 KFNRQYSSSE-FSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDLQTN--PKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDC--------SGPEENFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDI 228          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.481e-30
Identity = 76/195 (38.97%), Postives = 105/195 (53.85%), Query Frame = 3
Query:  189 YEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHG----VTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            + + Y T E+   R  I+ KNM     H        HG    +  F D++ EEF  +  G +    +      E   +K      +P++ DWR+KG VT VK QG CGSCWAFS +G +EG  F+ TG L+SLSEQ LVDC H+         + GC+GGLM  A++Y+   GGL+ E SYPY  K G C++ +E
Sbjct:   36 HRRLYGTNEEEWRR-AIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK------IPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHA-------QGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAE 216          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30
Identity = 89/236 (37.71%), Postives = 123/236 (52.12%), Query Frame = 3
Query:   99 NPTIRQVTDNPGHLL-------LGSATEN-NFKIFMQKYEKSYATREDYVHRLGIFAKNM--IRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            NP IR VTD     L       LG   +   F  F  +Y KSY +  +   R  IF++++  +R+   + L      G+  F+D+S EEF +   G          G     +  +     LPE  DWR+ G V+ VK QG CGSCW FSTTGA+E A   ATG  +SLSEQQLVDC  + +       + GC+GGL + A++Y+   GGL+ E SYPY G  G C+F +E + V+
Sbjct:   29 NP-IRPVTDRAASALESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRL--GINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAV----ALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVK 250          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30
Identity = 74/211 (35.07%), Postives = 107/211 (50.71%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEI-------DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            N F+ F+ K+ K+Y++  + +HR  IF  N+         D TA + +  FSDLS+EE  S YTG+           L   +    E+       D  P  FDWR    VT VK QG CG+CWAF+T G++E    I    L++LSEQQ +DCD           + GC GGL+  A++  +  GG++ ES YPY    G+C+ +  +  V
Sbjct:   26 NYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLS----------LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQCRINPNRFVV 217          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30
Identity = 75/210 (35.71%), Postives = 108/210 (51.43%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEI-------DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            F+ F+ K+ K Y++  + + R  IF  N+         D TA + +  FSDLS++E  S YTG+           L   +    E+       D  P  FDWR    VT VK QG CG+CWAF+T  ++E    I    L++LSEQQL+DCD+          D GC+GGL+  AY+ ++  GG++ E+ YPY G  G C+ D  K  V+
Sbjct:   28 FEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGL----------ALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVK 218          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30
Identity = 74/212 (34.91%), Postives = 108/212 (50.94%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEI-------DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            N F+ F+ K+ KSY++  + + R  IF  N+         D TA + +  F+DLS++E  S YTG+           L   +    E+       D  P  FDWR    VT VK QG CG+CWAF+T G++E    I     ++LSEQQL+DCD           D GC GGL+  A++ ++  GG++ ES YPY    G C+ ++ K  V+
Sbjct:   26 NYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLS----------LPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVK 218          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATL1_RAT6.648e-3140.00Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CPR4_ARATH8.683e-3138.66Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CYSEP_RICCO1.134e-3040.78Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
ACTN_ACTDE1.134e-3036.04Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CYSP2_DICDI1.481e-3039.90Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CATL1_MOUSE1.481e-3038.97Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSP2_MAIZE1.934e-3037.71Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATV_NPVOP1.934e-3035.07Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATV_NPVHC1.934e-3035.71Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATV_NPVCF4.309e-3034.91Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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