CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30
Identity = 74/205 (36.10%), Postives = 112/205 (54.63%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            ++++ ++ + Y K Y  + +   R  I+ KN+     H L     +H    G+    D++ EE  S+ + ++  P +        S+   M    LP++ DWR+KG VTEVK QG+CG+CWAFS  GA+E    + TG L+SLS Q LVDC      K       GC+GG MT A++Y+I   G++ E+SYPY     KCQ+DS+
Sbjct:   25 DHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRV-PNQWQRNITYKSNPNQM----LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNK-------GCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYDSK 217          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30
Identity = 79/195 (40.51%), Postives = 104/195 (53.33%), Query Frame = 3
Query:  189 YEKSYATREDYVHRLGIFAKNMIRAAEHQLLDP----TAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            Y K Y   +D  HR  I+ KN+    EH L       T   G+  F+D++ EEF++ Y        ++   G+   +        +P+  DWR+ G VTEVK QG CGSCWAFSTTG +EG         +S SEQQLVDC            +NGCSGGLM NAY+YL    GLE ESSYPY    G+C+++ +
Sbjct:   28 YNKEYNGADDQ-HRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNR----AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWG-------NNGCSGGLMENAYQYL-KQFGLETESSYPYTAVEGQCRYNKQ 209          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30
Identity = 81/214 (37.85%), Postives = 120/214 (56.07%), Query Frame = 3
Query:  135 HLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGL---PENFDWRDKGA-VTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEK 764
            +L + S  + +FK +M +++K Y+  E+Y HRL +F  N  +   H   + T   G+  FSD+S +E    Y   +   P+        S+ K   + G    P + DWR KG  V+ VK QG+CGSCW FSTTGA+E A  IATG +LSL+EQQLVDC  + +       ++GC GGL + A++Y+    G+  E +YPY G+   C+F  +K
Sbjct:   24 NLAVSSFEKLHFKSWMVQHQKKYSL-EEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSE---PQ------NCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDK 220          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30
Identity = 81/213 (38.03%), Postives = 118/213 (55.40%), Query Frame = 3
Query:  138 LLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGL---PENFDWRDKGA-VTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEK 764
            L   S  + +F+ +M +++K Y++ E+Y HRL  FA N+     H   + T   G+  FSD+S +E +  Y   +   P+        S+ K   + G    P + DWR KG  VT VK QG+CGSCW FSTTGA+E A  IATG L  L+EQQLVDC  + +       ++GC GGL + A++Y+    G+  E +YPY G+ G C++   K
Sbjct:   25 LAANSLEKFHFQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSE---PQ------NCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCKYQPSK 220          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30
Identity = 90/236 (38.14%), Postives = 125/236 (52.97%), Query Frame = 3
Query:   99 NPTIRQVTDNPGHLL----LGSATENN----FKIFMQKYEKSYATREDYVHRLGIFAKNM--IRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            NP IR VTD     L    LG+         F  F  +Y KSY +  +   R  IF++++  +R+   + L      G+  FSD+S EEF++     + G  +     L  + + M +   LPE  DWR+ G V+ VK Q  CGSCW FSTTGA+E A   ATG  +SLSEQQLVDC         G  + GC+GGL + A++Y+   GG++ E SYPY G  G C + +E  AV+
Sbjct:   31 NP-IRPVTDRAASTLESAVLGALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRL--GINRFSDMSWEEFQAT----RLGAAQTCSATLAGNHL-MRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQ 251          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.628e-30
Identity = 74/210 (35.24%), Postives = 107/210 (50.95%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEI-------DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            F+ F+ K+ K+Y++  + + R  IF  N+         D +A + +  FSDLS++E  S YTG+           L        E+       D  P  FDWR    VT VK QG CG+CWAF+T G++E    I    L++LSEQQL+DCD           D GC GGL+  AY+ ++  GG++ E+ YPY    G C+ ++ K  VR
Sbjct:   28 FEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLS----------LPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVR 218          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.351e-30
Identity = 78/199 (39.20%), Postives = 107/199 (53.77%), Query Frame = 3
Query:  183 QKYEKSYATREDYVH---RLGIFAKN--MIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTG-----MKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDN-GCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            ++++ ++  R  +     R G F  N   I +   +   P  +H +  F D+ + EF + + G         PP + G          + +  LP + DWR KGAVT VK QG CGSCWAFST  +VEG N I TG+L+SLSEQ+L+DCD         T DN GC GGLM NA++Y+   GGL  E++YPY   RG C
Sbjct:   47 ERWQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPG-----FMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD---------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTC 230          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.351e-30
Identity = 78/199 (39.20%), Postives = 107/199 (53.77%), Query Frame = 3
Query:  183 QKYEKSYATREDYVH---RLGIFAKN--MIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTG-----MKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDN-GCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            ++++ ++  R  +     R G F  N   I +   +   P  +H +  F D+ + EF + + G         PP + G          + +  LP + DWR KGAVT VK QG CGSCWAFST  +VEG N I TG+L+SLSEQ+L+DCD         T DN GC GGLM NA++Y+   GGL  E++YPY   RG C
Sbjct:   47 ERWQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPG-----FMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD---------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTC 230          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 9.600e-30
Identity = 79/217 (36.41%), Postives = 118/217 (54.38%), Query Frame = 3
Query:  132 GHLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEID-GLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGK-RGKCQFDSEKIAVR 776
            G++      +++F  +M+   K+Y T ++++ R   F KNM             V G+   +DLS EE+   Y G +    +++G    +  +++       P N DWR+K AVT VK QG CGSC++FSTTG+VEG   I TG L+SLSEQ ++DC  S         + GC+GGLMTNA++Y+I   GL  E  YPY  K   +C+F    +A +
Sbjct:   22 GNVFSHKQYQDSFIDWMRSNNKAY-THKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHI-KLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFG-------NEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAK 229          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 130.183 bits (326), Expect = 1.254e-29
Identity = 70/197 (35.53%), Postives = 106/197 (53.81%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQL-LDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            ++ ++ KY KSY +  ++  R  IF + +    EH    + +   G+  F+DL++EEF S Y     G  +          V  +    LP   DWR  GAV ++K QG CG CWAFS    VEG N I TG L+SLSEQ+L+DC  + + +       GC+GG +T+ ++++I  GG+  E +YPY  + G+C  D
Sbjct:   42 YESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQV----LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTR-------GCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVD 227          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATS_SAIBB4.309e-3036.10Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATLL_FASHE4.309e-3040.51Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATH_PIG4.309e-3037.85Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_BOVIN4.309e-3038.03Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ALEU_HORVU4.309e-3038.14Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATV_NPVAP5.628e-3035.24Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CYSP2_HORVU7.351e-3039.20Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU7.351e-3039.20Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CYSP3_DICDI9.600e-3036.41Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
ACTN_ACTCH1.254e-2935.53Actinidain OS=Actinidia chinensis PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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