CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.638e-29
Identity = 85/236 (36.02%), Postives = 124/236 (52.54%), Query Frame = 3
Query:   99 NPTIRQVTDNPGHLL-------LGSATEN-NFKIFMQKYEKSYATREDYVHRLGIFAKNM--IRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            NP IR VTD+    L       LG   +   F  F  ++ K Y    +   R  IF++++  +R+   + L      G+  F+D+S EEF++   G        +     + + +M +   LPE  DWR+ G V+ VK QG CGSCW FSTTG++E A   ATG  +SLSEQQLVDC  + +       + GCSGGL + A++Y+   GGL+ E +YPY G  G C +  E + V+
Sbjct:   32 NP-IRSVTDHAASALESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRL--GINRFADMSWEEFQASRLGAA-----QNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYN-------NFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVK 252          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.638e-29
Identity = 77/200 (38.50%), Postives = 111/200 (55.50%), Query Frame = 3
Query:  186 KYEKSYATREDYVHRLGIFAKNMIRAAEH-QLLDPTAVH---GVTPFSDLSEEEFESMYTGMKGGPPEM--DGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKI 767
            ++ K+YA   +   R+ IF +N  + A+H QL     V    G+  ++D+   EF+    G      ++  +  GL  ++        +P++ DWR+ GAVT VK QG CGSCWAFS+TGA+EG +F   G L+SLSEQ LVDC            +NGC+GGLM NA++Y+   GG++ E SYPY G    C F+   I
Sbjct:   34 QHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATI 226          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.638e-29
Identity = 86/227 (37.89%), Postives = 123/227 (54.19%), Query Frame = 3
Query:  105 TIRQVTDNPGHLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNM--IRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDN-GCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            T+ Q+     H+L       +F  F  +Y K Y + E+   R  +F +N+  IR+   + L       +  F+DL+ +EF+      K G  +     L+ S  K+ E   +P+  DWR+ G V+ VK QG CGSCW FSTTGA+E A   A G  +SLSEQQLVDC         GT +N GC GGL + A++Y+   GGL+ E +YPY GK G C+F ++ I V+
Sbjct:   45 TVVQILGQSRHVL-------SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKL--SLNQFADLTWQEFQRY----KLGAAQNCSATLKGSH-KITEAT-VPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIGVQ 248          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.793e-29
Identity = 76/194 (39.18%), Postives = 103/194 (53.09%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQ 749
            F  +M K+ K+Y   ++ ++R  IF  N+    E   +      G+  FSDLS +EF+  Y G    P +      +   V    +D LPE+ DWR KGAVT VK QG C SCWAFST   VEG N I TGNL+ LSEQ+LVDCD             GC+ G  + + +Y +A  G+   + YPYI K+  C+
Sbjct:   48 FNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSL--PEDYTNQPYDEEFVNEDIVD-LPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQY-VAQNGIHLRAKYPYIAKQQTCR 228          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29
Identity = 71/202 (35.15%), Postives = 111/202 (54.95%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNM--IRAAEHQLLD-PTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEK 764
            F+ F++ Y K+Y +  +   R  IF  N+  I A      D PTA + +  FSDLS+ E  + +TG+    PE      ++  +      G P +FDWR++  VT +K QGACG+CWAF+T  +VE    +    L+ LSEQQL+DCD         + D GC+GGL+  A++ ++  GG++ E  YP++G+  +C  D  +
Sbjct:   56 FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLS--IPERVSNFCKTIILNQPPDKG-PLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHR 245          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29
Identity = 80/219 (36.53%), Postives = 109/219 (49.77%), Query Frame = 3
Query:  156 TENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAE------------HQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            +E  FK F+Q+Y KSY   ++Y +R  +F  N+ +               +  L  +A  GV  FSD + +E     TG      +      E+  VK      LP+ +DWRD   VT +K QG CGSCWAF   G +E    I    L+ LSEQQL+DCD           D GC+GGLM  A++ L+  GG+E E+ YPY G    C  D+ KIAV+
Sbjct:   53 SEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQ-HYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDE---------VDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQMCTLDNRKIAVK 261          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.127e-29
Identity = 71/207 (34.30%), Postives = 109/207 (52.66%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-----LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            F+ F+ +Y K Y++ ++  +R  IF  N+         + +AV+ +  F+D+++ E  + +TG+  G        + ++  + + +DG      P NFDWR+   VT VK QG CG+CWAF+  GA+E    I    L+ L+EQQLVDCD           D GC GGL+  AY+ ++  GG+E+E  YPY   R  C     K AV
Sbjct:   40 FEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGLASGD-------IGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPCAVKPHKFAV 230          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.127e-29
Identity = 72/206 (34.95%), Postives = 111/206 (53.88%), Query Frame = 3
Query:  165 NFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIA 770
            ++ ++ + +EK Y  + +   R  I+ KN+     H L     +H    G+    D++ EE        + G   +     ++ + +      LP+  DWR+KG VTEVK QG+CG+CWAFS  GA+EG   + TG L+SLS Q LVDC +     E+   + GC GG MT A++Y+I  GG+E ++SYPY     KC ++S+  A
Sbjct:   35 HWDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISC-----RMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSN-----EEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYNSKNRA 230          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 8.127e-29
Identity = 72/205 (35.12%), Postives = 115/205 (56.10%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            ++++ ++ + Y K Y  + +   R  I+ KN+     H L     +H    G+    D++ EE  S+ + ++  P +        S+   +    LP++ DWR+KG VTEVK QG+CG+CWAFS  GA+E    + TG L+SLS Q LVD    C  ++ G  + GC+GG MT A++Y+I   G++ ++SYPY     KCQ+DS+
Sbjct:   25 DHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRV-PSQWQRNITYKSNPNRI----LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSK 218          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.061e-28
Identity = 73/173 (42.20%), Postives = 94/173 (54.34%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVHGVT----PFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGK 734
            R  ++ KNM     H        HG T     F D++ EEF  +  G +    +    G         EI   P++ DWR+KG VT VK QG CGSCWAFS TGA+EG  F  TG L+SLSEQ LVDC        +   + GC+GGLM NA++Y+   GGL+ E SYPY+G+
Sbjct:   48 RRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQN---QKHKKGKMFQEPLFAEI---PKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC-------SRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGR 207          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
ORYC_ORYSJ1.638e-2936.02Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATL_SARPE1.638e-2938.50Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
ALEUL_ARATH1.638e-2937.89Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
PAPA4_CARPA2.793e-2939.18Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATV_NPVLD3.648e-2935.15Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVHZ3.648e-2936.53Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATV_NPVMC8.127e-2934.30Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATS_MOUSE8.127e-2934.95Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATS_HUMAN8.127e-2935.12Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATL1_CANFA1.061e-2842.20Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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