CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 75/196 (38.27%), Postives = 102/196 (52.04%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEID--GLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQ 749
            F  +M  + K Y   ++ ++R  IF  N+    E    + +   G+  F+DLS +EF   Y G       +D    +S   + +  D   LPEN DWR KGAVT V+ QG+CGSCWAFS    VEG N I TG L+ LSEQ+LVDC+            +GC GG    A +Y +A  G+   S YPY  K+G C+
Sbjct:   48 FNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSL-----IDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYALEY-VAKNGIHLRSKYPYKAKQGTCR 228          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.811e-28
Identity = 66/196 (33.67%), Postives = 102/196 (52.04%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQ 749
            N FK +  +Y K Y++++++  R   F       A H   + +   G+  ++DLS +EF ++       P       +         +  +P   DWR++  VT VK QG CGSCW F +TG++EG N +  G L+SLSEQQLVDC          T   GC GG  ++A++Y++  G L  ES+YPY+ + G C+
Sbjct:  223 NLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDE----SLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAIL-------TGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLCR 407          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.811e-28
Identity = 74/183 (40.44%), Postives = 101/183 (55.19%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVHG----VTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKR-GKCQFDSE 761
            R  ++ KNM     H        HG    +  F D++ EEF  +  G +    +      ES  +++      P++ DWR+KG VT VK QG CGSCWAFS TGA+EG  F  TG L+SLSEQ LVDC      + +G  + GC+GGLM NA++Y+   GGL+ E SYPY+G+    C +  E
Sbjct:   48 RRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVLEV------PKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS-----RPQG--NQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPE 217          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.365e-28
Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 3
Query:  300 GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            G+  F+DL+ EEF + + G K        G       +   ++ LPE+ DWR+KGAV  VK QG CGSCWAFS    VE  N + TG +++LSEQ+LV+C  +         ++GC+GGLM +A+ ++I  GG++ E  YPY    GKC  + E   V
Sbjct:  101 GMNRFADLTNEEFRATFLGAKVAERSRAAG----ERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQ-------NSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKV 247          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.365e-28
Identity = 75/205 (36.59%), Postives = 106/205 (51.71%), Query Frame = 3
Query:  150 SATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-----LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQ 749
            S  +  F  F+ KY K Y   ++   R  IF +N+        L+ +A+  +   +D+S  E     TG+K     +  G  ++S      I G     +P++FDWRD+ +VT VKMQ  CGSCWAFS    +E    I     L LSEQQLVDCD           +NGC+GGLM+ A++ +I AGG+  E+ YPY G  G C+
Sbjct:   37 SNAQELFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLK---LSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD---------KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVCK 229          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.088e-28
Identity = 86/238 (36.13%), Postives = 119/238 (50.00%), Query Frame = 3
Query:   90 VPQNPTIRQVTDNPGHLLLGSATENNFK--------IFMQKYEKSYATREDYVHRLGIFAKNMIRAAEH-QLLDPTAVH---GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLES----SSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            +P+  T+R     P   LL  A   +F          F  ++ K+Y    +   RL IF +N  + A+H Q      V     V  ++DL   EF  +  G      +      ES    + +    +  LP++ DWR KGAVT VK QG CGSCWAFS+TGA+EG +F  +G L+SLSEQ LVDC            +NGC+GGLM NA++Y+   GG++ E SYPY      C F+
Sbjct:   25 IPEQITMRTAVLLPLLALLAVAQAVSFADVVMEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVT-LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFN 254          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.088e-28
Identity = 71/211 (33.65%), Postives = 115/211 (54.50%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            +  ++++ + ++K Y ++ D + R  I+ KN+ + + H L     VH     +    D++ EE     TG++  P         + ++   E +G +P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC          T + GC GG MT A++Y+   GG++ E +YPY+G+   C +++   A +
Sbjct:   23 DTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSR----SYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC---------VTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAK 220          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.268e-28
Identity = 74/207 (35.75%), Postives = 106/207 (51.21%), Query Frame = 3
Query:  177 FMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDP----------TAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKI 767
            F  +Y + Y   ++ ++R  +F +N       QL++           T    +  F D++ EEF ++  G K G         E  +V   E   +  + DWR K  VT VK Q  CGSCWAFS TGA+EG +F+    L+SLSEQQLVDC            ++GC GG MT+A+ Y+   GG++ ESSYPY  +   C+FD+  I
Sbjct:   23 FKTQYGRKYGDAKEELYRQRVFQQN------EQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRG------EPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYG-------NDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSI 210          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.268e-28
Identity = 68/203 (33.50%), Postives = 106/203 (52.22%), Query Frame = 3
Query:  177 FMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLL----DPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            F + + ++Y +  +   R  IF   + + AEH +     + T    +  FSD+++EEF  M    +   P ++G       V  + +   PE+ DWR KG V  V+ QG CGSCWA ST  A+E  + I +G+ + LS QQLVDC  S         ++GC+GG   N ++Y +   GLE ++ YPY GK  KC+ + +  +V
Sbjct:   26 FKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFRDMLMKNEASRPNLEG-----LEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYG-------NHGCNGGFAVNGFEY-VKDNGLESDADYPYSGKEDKCKANDKSRSV 215          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.268e-28
Identity = 71/204 (34.80%), Postives = 112/204 (54.90%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            +  ++++ + Y K Y ++ D + R  I+ KN+   + H L     VH     +    D++ EE     TG+K  P         + ++ + + +G  P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++
Sbjct:   24 DTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYN 214          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
PAPA3_CARPA1.386e-2838.27Caricain OS=Carica papaya PE=1 SV=2[more]
CFAD_DICDI1.811e-2833.67Counting factor associated protein D OS=Dictyostel... [more]
CATL1_PIG1.811e-2840.44Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
ORYB_ORYSJ2.365e-2839.87Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CATV_GVXN2.365e-2836.59Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATL_DROME3.088e-2836.13Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATK_MOUSE3.088e-2833.65Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CYSP3_HOMAM5.268e-2835.75Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATLL_PHACE5.268e-2833.50Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATK_PIG5.268e-2834.80Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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