CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.880e-28
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = 3
Query:  432 LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            LPE  DWR KGAVT VK QG+CGSCWAFST   VE  N I TGNL+SLSEQ+LVDCD           ++GC GG    AY+Y+I  GG++ +++YPY   +G CQ  S+ +++
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK---------NHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPCQAASKVVSI 105          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.986e-28
Identity = 74/183 (40.44%), Postives = 102/183 (55.74%), Query Frame = 3
Query:  195 KSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH--GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVT-EVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGK 734
            K+Y    +   R  IF  N+ R  EH   DP   +  G+  FSDL+ +EF++ Y G   G  E       +   +  E D LP+  DWR++GAV   VK QG CGSCWAF+ TGAVEG N I TG L+SLSEQ+L+DCD       +G  + GC+GG    A++++   GG+  +  Y Y G+
Sbjct:   50 KNYNGLGEKERRFKIFKDNLKRIEEHNS-DPNRSYERGLNKFSDLTADEFQASYLG---GKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCD-------RGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGE 221          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.174e-27
Identity = 71/204 (34.80%), Postives = 111/204 (54.41%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            +  ++++ + Y K Y ++ D + R  I+ KN+   + H L     VH     +    D++ EE     TG+K  P         + ++ + + +G  P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    + GC GG MTNA++Y+    G++ E +YPY+G+   C ++
Sbjct:   23 DTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHS----NDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYN 213          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.002e-27
Identity = 72/209 (34.45%), Postives = 112/209 (53.59%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPEN----FDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            N F+ F+ ++ K+Y++  + + R  IF  N+         D +A + +  FSDLS++E  + YTG+   P +        +  K++ +D  P      FDWR    VT VK QG CG+CWAF+T G++E    I    L++LSEQQ++DCD           D GC+GGL+  A++ +I  GG++ ES YPY      C+ +S K  V+
Sbjct:   26 NYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLSL-PTQTQ------NFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQ 217          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.002e-27
Identity = 70/211 (33.18%), Postives = 114/211 (54.03%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            +  ++++ + + K Y ++ D + R  I+ KN+ + + H L      H     +    D++ EE     TG++  P         + ++   E +G +P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    + GC GG MT A++Y+   GG++ E +YPY+G+   C +++   A +
Sbjct:   23 DTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSR----SFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-----VSE----NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAK 220          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.614e-27
Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGL-------PENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            N F+ F+++Y K Y +  + + R  IF  N+         D TAV+ +  FSDLS++E  + YTG+           L   +    E+  L       P  FDWR    +T VK QG CG+CWAF+T  ++E    IA   L++LSEQQ++DCD         + D GC GGL+  A++ +I+ GG++ E+ YPY      C+ D  K  V
Sbjct:   26 NYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND-TAVYKINKFSDLSKDETIAKYTGLS----------LPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNYCRMDPTKFVV 216          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.415e-27
Identity = 57/107 (53.27%), Postives = 72/107 (67.29%), Query Frame = 3
Query:  426 DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            D LP++ DWR+ GAV  VK QG CGSCWAFST  AVEG N I TG+L+SLSEQQLVDC          T ++GC GG M  A+++++  GG+  E +YPY G+ G C
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCT---------TANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGIC 98          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.460e-27
Identity = 79/204 (38.73%), Postives = 108/204 (52.94%), Query Frame = 3
Query:  153 ATENNFKIFMQKYEKSYATREDYVH---RLGIFAKNMIRAAE-HQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMME-IDGLPE-NFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            A+E++     +K+   +    D      R  +F +N+    E +Q  D      +  F D++ +EF S Y G K        G  +++   M E +  LP  + DWR KGAVT VK QG CGSCWAFST  +VEG N I TG L+SLSEQ+LVDCD S         + GC+GGLM  A+++ I   G+  E SYPY  + G C
Sbjct:   31 ASEDSLWNLYEKWRTHHTVARDLDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTS--------YNEGCNGGLMDYAFEF-IQKNGITTEDSYPYAEQDGTC 225          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.460e-27
Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 3
Query:  300 GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTE-VKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            G+  F+DL+  EF + Y G          G     + +   ++ LP++ DWRDKGAV   VK QG CGSCWAFS   AVEG N I TG L+SLSEQ+LV+C        +   ++GC+GG+M +A+ ++   GGL+ E  YPY    GKC
Sbjct:  115 GMNRFADLTNGEFRATYLGTTPA----GRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVEC-------ARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKC 253          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.824e-27
Identity = 68/206 (33.01%), Postives = 104/206 (50.49%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-----LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIA 770
            F+ F+ +Y K Y + ++  +R  IF  N+    +    + +AV+ +  F+D+ + E    +TG+  G        L  +  + + +DG      P +FDWR    +T VK QG CG+CW F++ GA+E    I    L+ LSEQQLVDCD           D GC GGL+  AY+ ++  GG+E+E  Y Y  +R  C     K A
Sbjct:   40 FEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIRHTGLASGE-------LGLNFCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDF---------VDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYKAERQPCALKPHKFA 229          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
ERVC_TABDI6.880e-2851.75Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CPR2_ARATH8.986e-2840.44Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATK_RABIT1.174e-2734.80Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATV_NPVBM2.002e-2734.45Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATK_RAT2.002e-2733.18Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATV_NPVEP2.614e-2734.60Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CPGP2_ZINOF3.415e-2753.27Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSP_HEMSP4.460e-2738.73Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSP1_ORYSJ4.460e-2742.67Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATV_NPVSE5.824e-2733.01Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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