CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.824e-27
Identity = 71/182 (39.01%), Postives = 91/182 (50.00%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVHGVT----PFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            R  ++ KNM     H        H  T     F D++ EEF  +  G +   P       E    +       P + DWR+KG VT VK QG CGSCWAFS TGA+EG  F  TG L+SLSEQ LVDC            + GC+GGLM  A++Y+   GGL+ E SYPY      C+++ E
Sbjct:   48 RRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEA------PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGP-------QGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPE 216          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.824e-27
Identity = 70/204 (34.31%), Postives = 111/204 (54.41%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            +  ++++ + Y K Y ++ D + R  I+ KN+   + H L     VH     +    D++ EE     TG+K            + ++ + + +G  P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++
Sbjct:   23 DTQWELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASR----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYN 213          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.607e-27
Identity = 56/107 (52.34%), Postives = 71/107 (66.36%), Query Frame = 3
Query:  426 DGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            D LPE+ DWR+KG +  VK QG+CGSCWAFS   A+E  N I TGNL+SLSEQ+LVDCD S         + GC GGLM  A++++I  GG++ E  YPY  + G C
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRS--------YNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVC 114          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.607e-27
Identity = 75/227 (33.04%), Postives = 120/227 (52.86%), Query Frame = 3
Query:  129 PGHLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNM----IRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDG-------GGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAVR 776
            PG   L  + +  ++ +  KYEK Y+  E+ + R+ ++ +N+    +   E+ L   T    +  F+D+++EEF+ M  G +      +        G    +S      D LP+  DWR++G VT V+ QG C SCWAF  TGA+EG  F  TG L+ LS Q L+DC      K +G  + GC  G   NA++Y++  GGLE E++YPY  K G C+++ +  + +
Sbjct:   16 PGASALDLSLDVQWQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWR--DALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCS-----KPQG--NRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAK 232          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.935e-27
Identity = 71/203 (34.98%), Postives = 108/203 (53.20%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            +  + ++ + Y K Y ++ D + R  I+ KN+   + H L     VH     +    D++ EE     TG+K  P        ++  +   E    P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++
Sbjct:   24 DTQWDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSN--DTLYIPDWE-SRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYN 214          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.298e-26
Identity = 67/202 (33.17%), Postives = 100/202 (49.50%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIAV 773
            F+ F+  Y K Y    +   R  IF + +        L+ +AV+ +  F+DLS+ E  S YTG+    P       ++  +      G P NFDWR +  VT +K Q ACG+CWAF+T  ++E    I     + LSEQQ++DCD+          D GC GGL+  A++ +I  G L +E  YPY G    C+   ++  V
Sbjct:   31 FETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLN--MPVQTTNFCKTIVIDQPPGKG-PLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGV 220          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.298e-26
Identity = 75/190 (39.47%), Postives = 103/190 (54.21%), Query Frame = 3
Query:  213 EDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKIA 770
            E+ V RL I+ KN+     H L     +H    G+    D++ EE       ++   P    G L+SSS +      LP++ DWR+KG VT VK QG+CGSCWAFS  GA+EG   + TG L+SLS Q LVDC       E+   + GC GG MT A++Y+I    ++ E+SYPY     KC +D +  A
Sbjct:   42 EEDVRRL-IWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIGYMGSLRIPRPWNRSGTLKSSSNQT-----LPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCS-----TEEKYGNKGCGGGFMTEAFQYIIDT-SIDSEASYPYKAMDEKCLYDPKNRA 219          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.298e-26
Identity = 72/202 (35.64%), Postives = 103/202 (50.99%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNM----IRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSE 761
            +K +  KY KSY+ +E+ + R  ++ +NM    +   E+ L        +  F D + EEF      +       D       S+      GLP+  DWR++G VT V+ QG CGSCWAF+  GA+EG  F  TGNL  LS Q L+DC        K   + GC  G    A++Y++   GLE E++YPY GK G C++ SE
Sbjct:   29 WKDWKTKYAKSYSPKEEALRR-AVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQNHVSI------GLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDC-------SKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPCRYRSE 216          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.695e-26
Identity = 69/204 (33.82%), Postives = 112/204 (54.90%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            + +++++ + + K Y ++ D + R  I+ KN+   + H L     VH     +    D++ EE     TG+K            + ++ + + +G  P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++
Sbjct:   23 DTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN 213          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.695e-26
Identity = 69/204 (33.82%), Postives = 112/204 (54.90%), Query Frame = 3
Query:  159 ENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVH----GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDG-LPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            + +++++ + + K Y ++ D + R  I+ KN+   + H L     VH     +    D++ EE     TG+K            + ++ + + +G  P++ D+R KG VT VK QG CGSCWAFS+ GA+EG     TG LL+LS Q LVDC     + E    ++GC GG MTNA++Y+    G++ E +YPY+G+   C ++
Sbjct:   23 DTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-----VSE----NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN 213          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATL1_CERAE5.824e-2739.01Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATK_BOVIN5.824e-2734.31Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CYSPL_SOLLC7.607e-2752.34Low-temperature-induced cysteine proteinase (Fragm... [more]
CATQ_RAT7.607e-2733.04Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATK_CANFA9.935e-2734.98Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATV_NPVBS1.298e-2633.17Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATS_RAT1.298e-2639.47Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATJ_MOUSE1.298e-2635.64Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATK_MACMU1.695e-2633.82Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.695e-2633.82Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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