CX047403

Overview
NameCX047403
Unique NameCX047403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_BACSU (Naphthoate synthase OS=Bacillus subtilis GN=menB PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 5.748e-50
Identity = 95/146 (65.07%), Postives = 115/146 (78.77%), Query Frame = -1
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPLE+LE+ETIKW  E+L  SPTA+R LK+A NA  DG AG+Q   GDA L++Y  +E  EG+ +F E+R+PDF +FP  P
Sbjct:  126 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEQLEEETIKWCEEMLEKSPTALRFLKAAFNADTDGLAGIQQFAGDATLLYYTTDEAKEGRDSFKEKRKPDFGQFPRFP 271          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAHJ (Naphthoate synthase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.508e-50
Identity = 93/146 (63.70%), Postives = 118/146 (80.82%), Query Frame = -1
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPL+++E ET++W +EI+++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  127 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDQIEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP 272          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_ECOLI (Naphthoate synthase OS=Escherichia coli (strain K12) GN=menB PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.508e-50
Identity = 95/146 (65.07%), Postives = 117/146 (80.14%), Query Frame = -1
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            +CD TIAADNAIFGQTGPKVGSFD G+G+S M+R+VG KKARE+WFL R Y A++A  MGLVNTVVPL  LE+ET++W RE+L+NSP A+R LK+ALNA  DG AGLQ L G+A ++FY  EEG EG+ AF ++R+PDF KF   P
Sbjct:  140 MCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 285          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_ECOL6 (Naphthoate synthase OS=Escherichia coli O6 GN=menB PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.508e-50
Identity = 95/146 (65.07%), Postives = 117/146 (80.14%), Query Frame = -1
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            +CD TIAADNAIFGQTGPKVGSFD G+G+S M+R+VG KKARE+WFL R Y A++A  MGLVNTVVPL  LE+ET++W RE+L+NSP A+R LK+ALNA  DG AGLQ L G+A ++FY  EEG EG+ AF ++R+PDF KF   P
Sbjct:  140 MCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 285          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_STAS1 (Naphthoate synthase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=menB PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.084e-48
Identity = 92/146 (63.01%), Postives = 117/146 (80.14%), Query Frame = -1
Query:  290 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKFPWRP 727
            VCD TIAADNAIFGQTGPKVGSFDAGYGS  ++R+VG KKARE+W+L R Y A+EA  MGLVNTVVPL+++E ET++W +E+ ++SPTA+R LK+A+NA  DG AGLQ + GDA L++Y  +E  EG+ AF E+R PDF +FP  P
Sbjct:  127 VCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLDQVEDETVQWCQEMKQHSPTALRFLKAAMNADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP 272          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: MENB_CYACA (Naphthoate synthase OS=Cyanidium caldarium GN=menB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.087e-40
Identity = 83/142 (58.45%), Postives = 103/142 (72.54%), Query Frame = -1
Query:  302 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDFLKF 727
            +CD TIA++NA+ GQ+GPKVGSFDAGYGS+ M+R++G KKARE+WF    Y A EA KMGLVN VV +E L+   IK + +IL  SP AIR LKS+LNA  DG +GLQ L G + ++FY   EG EG  AF+E R PDF KF
Sbjct:  125 MCDLTIASENAVLGQSGPKVGSFDAGYGSAYMARIIGQKKARELWFTCYQYDAFEAYKMGLVNWVVKIEDLDSYAIKLATDILNKSPLAIRFLKSSLNADCDGQSGLQELAGYSTMLFYMSAEGQEGHRAFLENREPDFSKF 266          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13
Identity = 48/142 (33.80%), Postives = 72/142 (50.70%), Query Frame = -1
Query:  317 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNA-----VDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRP 727
            +CD  IA + A+FGQ   K+G+     G+  + R +G  KA E+       TA EAEK GLV+ VVP+E+L  E  K + +I   S   + + K A+NA     + +G    + +        +G  +  EG  AFVE+R P
Sbjct:  135 MCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLVSKVVPVEELLTEATKMAEKIASYSQLTVAMAKEAVNASYELTLQEGIRFERRMFHST----FGTHDQKEGMNAFVEKRTP 272          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCTU (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis GN=echA8 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13
Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = -1
Query:  311 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALN-----AVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDF 727
            +CD  IAAD A FGQ   K+G      GS  ++R +G  KA ++    R   A EAE+ GLV+ VVP + L  E    +  I + S +A R+ K A+N     ++ +G    + L   A    +  E+ SEG  AF+E+R P F
Sbjct:  115 MCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSA----FATEDQSEGMAAFIEKRAPQF 254          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCBO (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis GN=echA8 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13
Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = -1
Query:  311 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALN-----AVDDGHAGLQALGGDAPLIFYGPEEGSEGKTAFVERRRPDF 727
            +CD  IAAD A FGQ   K+G      GS  ++R +G  KA ++    R   A EAE+ GLV+ VVP + L  E    +  I + S +A R+ K A+N     ++ +G    + L   A    +  E+ SEG  AF+E+R P F
Sbjct:  115 MCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSA----FATEDQSEGMAAFIEKRAPQF 254          
BLAST of CX047403 vs. ExPASy Swiss-Prot
Match: ECHM_MOUSE (Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 44/142 (30.99%), Postives = 74/142 (52.11%), Query Frame = -1
Query:  311 VCDFTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAEEAEKMGLVNTVVPLEKLEQETIKWSREILRNSPTAIRVLKSALNAVDDGHAGLQALGGDAPLIFY---GPEEGSEGKTAFVERRRPDF 727
            +CD   A + A FGQ    +G+     G+  ++R VG   A EM       +A++A++ GLV+ + P+EKL +E I+ + +I  NS   + + K ++NA  +    L         +FY     ++  EG TAFVE+R+ +F
Sbjct:  148 MCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVEKLVEEAIQCAEKIASNSKIVVAMAKESVNAAFE--MTLTEGNKLEKRLFYSTFATDDRREGMTAFVEKRKANF 287          
The following BLAST results are available for this feature:
BLAST of CX047403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
MENB_BACSU5.748e-5065.07Naphthoate synthase OS=Bacillus subtilis GN=menB P... [more]
MENB_STAHJ7.508e-5063.70Naphthoate synthase OS=Staphylococcus haemolyticus... [more]
MENB_ECOLI7.508e-5065.07Naphthoate synthase OS=Escherichia coli (strain K1... [more]
MENB_ECOL67.508e-5065.07Naphthoate synthase OS=Escherichia coli O6 GN=menB... [more]
MENB_STAS11.084e-4863.01Naphthoate synthase OS=Staphylococcus saprophyticu... [more]
MENB_CYACA1.087e-4058.45Naphthoate synthase OS=Cyanidium caldarium GN=menB... [more]
ECHM_DICDI5.620e-1333.80Probable enoyl-CoA hydratase, mitochondrial OS=Dic... [more]
ECHA8_MYCTU7.339e-1335.42Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECHA8_MYCBO7.339e-1335.42Probable enoyl-CoA hydratase echA8 OS=Mycobacteriu... [more]
ECHM_MOUSE3.084e-1130.99Enoyl-CoA hydratase, mitochondrial OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A01_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A01-B1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047403 ID=CX047403; Name=CX047403; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTTTTTTTTCCACATGTCAAATTGAACCTCTTAGCTGAACTA
AAGTTTCTAAAATCTTTTATTCAAAGGTTGGTTGGTCTCTTTGACAACTG
AAAACGTGCAACTAACAAAAAAAACCAGGTCTGCATCCCACAAATAAAAT
ACAAATACAACGTTTTATCTCAAATTATCCCCCTCCATTATTTTTTGATC
TTGAAAAAAAAAAAAGGGCCACAAAACCACCCCCTGCCGAAAAAGTTTAT
GTTGTTGGTTAAAATTAAGCTAAAAAACAGCAAGCGCTAAGGTCGCCAAG
GAAATTTCAAAAAGTCGGGGCGTCTGCGTTCCACAAATGCTGTCTTCCCT
TCACTACCTTCCTCGGGGCCATAAAATATGAGGGGGGCATCTCCCCCAAG
GGCCTGGAGTCCAGCATGGCCATCATCAACTGCATTGAGAGCTGATTTGA
GCACTCTAATAGCAGTCGGACTGTTTCTTAGGATCTCTCGACTCCATTTA
ATTGTTTCTTGCTCTAACTTCTCTAGGGGAACAACAGTGTTCACAAGTCC
CATTTTCTCTGCCTCCTCAGCAGTGTAAAACCTTGCTAAAAACCACATTT
CACGTGCTTTTTTAGGCCCCACCAAACGTGACATGATGGAGCTTCCATAA
CCTGCATCAAAGCTTCCAACCTTAGGACCAGTTTGGCCAAAAATTGCGTT
ATCTGCTGCAATAGTAAAATCACAAAC
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