CX047400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.506e-20 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 89 AQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNL-PELPSAQSHHLPASSA 370 + SS + +GKGGP+N+ Y+GVRQR+WGKWVAEIREP + R WLGTF T+ +AA AYD AA LYG A+LNL P PS+ S + SA Sbjct: 33 SSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSA 127
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.275e-19 Identity = 53/122 (43.44%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 47 LMGGIGEKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPE--LPSAQSHHLPASSANCTQHVAQRRNQ 406 L+G KK ++ QA K Y+G+RQR WGKW AEIR+P +G+R WLGTFDT+ EAA AYDAAAR++ G AK+N PE PS S P++ N Q + N+ Sbjct: 100 LVGSAYAKKTVESAEQAE--------KSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNK 213
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.275e-19 Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 2 Query: 83 KPAQASSRKGCMRGK------GGPENALCT-----YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQSHHLPASSANCTQHVAQRRNQPQ--MIHNSGIT 436 KPA +++ +G + GK G E + Y+G+RQR WGKW AEIR+P GAR+WLGTF T+ EAA AYDAAAR++ G AK+N PE + + AN + VA+ P ++ NS I+ Sbjct: 90 KPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPNPSPALVQNSNIS 220
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18 Identity = 46/76 (60.53%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 122 GKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQSH 349 G G P Y+GVRQR WGKWVAEIR P RLWLGTFDT+ EAA+AYD AA KL G A+LN P L SH Sbjct: 141 GSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSH 216
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.140e-18 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 65 EKKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPEL--PSAQSHHLPASSANCT 379 +K+Q +P + RK Y+G+R+R WGKW AEIR+P +G R+WLGTF+T+ EAA+AYD AA+++ G AKLN P+L P ++ P SS T Sbjct: 62 KKEQATEPGKRRKRKN-------------VYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRST 155
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.102e-18 Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 134 PENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQSHHLPASSANC 376 P +A Y+GVRQR WGKWVAEIR+P RLWLGTFDT+ EAA+AYD A KL G A+LN PEL + P C Sbjct: 180 PFSATKLYRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPELFLNKQEPTPVHQKQC 260
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 155 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPE---LPSAQSHHLPASS 367 Y+GVRQR WGKW AEIR+PN+ AR+WLGTFDT+ EAA+AYD AA + G AKLN PE + Q + PA+S Sbjct: 70 YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHIRVNPTQLYPSPATS 143
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.036e-17 Identity = 50/95 (52.63%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 155 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPEL-------PSAQSHHLP---ASSANCTQHVAQRRNQP 409 Y+GVRQR WGKWVAEIR P RLWLGTFDT+ EAA+AYD AA KL G A+LN P L PS + P A A +A+ +NQP Sbjct: 143 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPALRYQTGSSPSDTGEYGPIQAAVDAKLEAILAEPKNQP 237
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.036e-17 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 155 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQSHHLPASSANCTQHVAQRRNQP 409 Y+GVRQR WGKW AEIR+P + AR+WLGTF+T+ EAA+AYD AA K G AKLN PE Q + ++ + V++ N P Sbjct: 39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPE--RVQGPTTTTTISHAPRGVSESMNSP 121
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.659e-17 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 155 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELP-SAQSHHLPASSANCTQHVAQRR 400 ++G+RQR WGKW AEIR+P +G R+WLGTF+++ EAA AYDA AR++ G AK+N PE P +AQ +++A + +++ Sbjct: 120 FRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQK 202 The following BLAST results are available for this feature:
BLAST of CX047400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 125
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047400 ID=CX047400; Name=CX047400; organism=Citrus sinensis; type=EST; length=812bpback to top |