CX047400

Overview
NameCX047400
Unique NameCX047400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.042e-13
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 2
Query:  155 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLP 325
            Y+GVRQR WGK+ AEIR+P + GAR+WLGT++T+ EAA+AYD AA ++ G  A LN P
Sbjct:   99 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFP 156          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.042e-13
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 2
Query:  155 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLP 325
            Y+GVRQR WGK+ AEIR+P + GAR+WLGT++T+ EAA+AYD AA ++ G  A LN P
Sbjct:  103 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFP 160          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.973e-13
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 2
Query:  152 TYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPEL 331
            +Y+GVR R+WGKWV+EIREP + +R+WLGT+ T+  AA A+D AA  + G    LN PEL
Sbjct:   70 SYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPEL 129          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.188e-13
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 2
Query:  155 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPEL 331
            Y+GVR+R WGKWV+EIREP + +R+WLGTF +   AA A+D AA  + G  A LN P+L
Sbjct:   36 YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDL 94          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF14_ARATH (Ethylene-responsive transcription factor ERF014 OS=Arabidopsis thaliana GN=ERF014 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.188e-13
Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = 2
Query:   68 KKQLKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDA-KLNLPELPSAQSH 349
            +K  K+ +  SS              +  YKGVR R+WG WV+EIR PN+  R+WLG++ T+  AA AYDAA   L G  A  LN PE+ ++  H
Sbjct:    6 QKTPKRMSSPSSSSSSSSSTSSSSIRMKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANNLNFPEISTSLYH 100          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.188e-13
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 2
Query:  155 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLP 325
            Y+GVRQR WGK+ AEIR+P + GAR+WLGTF+T+ +AA+AYD AA ++ G  A LN P
Sbjct:  117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFP 174          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.188e-13
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 2
Query:  155 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLP 325
            Y+GVRQR WGK+ AEIR+P + GAR+WLGTF+T+ +AA+AYD AA ++ G  A LN P
Sbjct:  148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP 205          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.776e-13
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 2
Query:  155 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPE--LPSAQSHHL--------PASSANCTQHVAQRRNQPQM 415
            ++GVR+R WGK+ AEIR+P+R GARLWLGTF+T+ EAA AYD AA  L G  A LN P    P    + L         +SS+  T     R+NQ ++
Sbjct:   20 FRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREV 117          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF69_ARATH (Ethylene-responsive transcription factor ERF069 OS=Arabidopsis thaliana GN=ERF069 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.850e-13
Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 2
Query:  155 YKGVRQRTWGKWVAEIR---EPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNL--PELPSA 340
            ++GVRQR WGKW AEIR      R  R+WLGTF+T+ EAA+AYD AA +L GPDA  N   P++ SA
Sbjct:   75 FRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNFGRPDVDSA 141          
BLAST of CX047400 vs. ExPASy Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.850e-13
Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 2
Query:  155 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHEAAVAYDAAARKLYGPDAKLNLPELPSAQS 346
            YKGVR+R WGKWV+EIR P+   R+WLG++DT  +AA A+DAA   L G DA  N P  P + S
Sbjct:   21 YKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNNPPSIS 84          
The following BLAST results are available for this feature:
BLAST of CX047400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
ERF2_TOBAC3.042e-1360.34Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY3.042e-1360.34Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF35_ARATH3.973e-1355.00Ethylene-responsive transcription factor ERF035 OS... [more]
TINY_ARATH5.188e-1355.93Ethylene-responsive transcription factor TINY OS=A... [more]
ERF14_ARATH5.188e-1341.05Ethylene-responsive transcription factor ERF014 OS... [more]
EF101_ARATH5.188e-1360.34Ethylene-responsive transcription factor 2 OS=Arab... [more]
EF100_ARATH5.188e-1360.34Ethylene-responsive transcription factor 1A OS=Ara... [more]
ERF98_ARATH6.776e-1345.92Ethylene-responsive transcription factor ERF098 OS... [more]
ERF69_ARATH8.850e-1356.72Ethylene-responsive transcription factor ERF069 OS... [more]
ERF18_ARATH8.850e-1354.69Ethylene-responsive transcription factor ERF018 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13H12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13H12-O24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047400 ID=CX047400; Name=CX047400; organism=Citrus sinensis; type=EST; length=812bp
AAACGATCTTGTTTTCAGAGTCCTGTCTTAGGGAATGTCAAAAGCACTTA
TGGGTGGTATTGGAGAGAAAAAGCAGCTTAAGAAGCCTGCACAGGCTAGC
TCAAGGAAAGGTTGCATGAGAGGCAAAGGAGGCCCTGAGAATGCTCTTTG
TACTTACAAAGGTGTTCGACAGAGAACTTGGGGCAAATGGGTGGCCGAAA
TCCGTGAACCGAATCGCGGTGCACGTCTCTGGCTTGGGACATTTGACACT
TCCCATGAAGCCGCCGTGGCTTATGATGCTGCTGCTCGTAAACTTTACGG
CCCAGATGCCAAACTCAATTTGCCAGAGCTTCCATCAGCTCAATCTCATC
ACTTGCCAGCTTCTTCAGCCAATTGTACCCAGCATGTTGCTCAAAGGCGA
AATCAACCGCAAATGATCCACAATTCAGGTATCACTTGTTCATCAAACAG
CCCGCTTCCCAGGAGTAGTAATAATGATGCAACACAAGTTTACAATTTCA
ATTACAACAACTCAGCCATGTCTTTTCCTGATAATGGGAGCTTTGGGTCT
CATGGGAAGTTGGCTGAAAATGAAGTCAAATTCAGTCTGAATGAACAGGA
GACGGATGGATTTTGGGAGAATTTGAACGTGAATTCGCCTGTATTTGATG
AATCAATATGGGCAGAAGCAGCAATGTCCGTTGATTATCCAGTTATGGGC
GAACAAGGACTTCTTAATGGCAACTTTGTTGATGCAAGTGGCTGTGGGTG
GGATATGTTGCCGACTCCGTGGTGCGTTTGAGTATCTGACTTGGTGATTG
TCCATTCCAAGT
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