CX047395

Overview
NameCX047395
Unique NameCX047395
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = -3
Query:  498 HNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 692
            H  ++  W+++ G VYD TKFL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  260 HASQESAWIVVHGHVYDCTKFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKALLDTYRIGEL 323          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 31/70 (44.29%), Postives = 42/70 (60.00%), Query Frame = -3
Query:  489 AGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 698
            A HN +K CW I    VYD T FLD+HPGG   +L   G D TD+FE + HS+ A  M+ ++ +G   S+
Sbjct:  546 AKHNSKKSCWFICRDLVYDATPFLDEHPGGATSILLCGGTDCTDEFESI-HSTKAWQMLKKYCIGRCSST 614          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = -3
Query:  498 HNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 692
            HN     W+I+ G VYD T+FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++
Sbjct:  546 HNSADSAWIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 609          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 26/65 (40.00%), Postives = 43/65 (66.15%), Query Frame = -3
Query:  498 HNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 692
            H+     W+I+ G +YD T+FL DHPGG + +L   G D T++F+ + HS  AK +++EF +G++
Sbjct:  542 HSSADSAWIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKKLLEEFRIGEL 605          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 26/68 (38.24%), Postives = 45/68 (66.18%), Query Frame = -3
Query:  489 HNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 692
            HN     W+++ G VY+ T+FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++ S+
Sbjct:  562 HNTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKRLLEDFRIGELIST 628          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = -3
Query:  498 HNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 692
            HN     W+++ G +YD T FL DHPGG + +L   G D T++F+ + HS  AK +++E+ VG++
Sbjct:  545 HNSADSAWIVVHGHIYDCTSFLKDHPGGSDSILLNAGTDCTEEFDAI-HSDKAKKLLEEYRVGEL 608          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA2_HORVU (Nitrate reductase [NADH] (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 26/65 (40.00%), Postives = 43/65 (66.15%), Query Frame = -3
Query:  498 HNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 692
            H  ++  W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  546 HGSKESAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAI-HSDKAKALLDTYRIGEL 609          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 26/65 (40.00%), Postives = 43/65 (66.15%), Query Frame = -3
Query:  498 HNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 692
            H  ++  W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  549 HGSKESAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAI-HSDKAKALLDTYRIGEL 612          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 26/65 (40.00%), Postives = 43/65 (66.15%), Query Frame = -3
Query:  498 HNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 692
            HN     W+I+ G +YD T+FL DHPGG + +L   G D T++FE + HS  AK +++++ +G++
Sbjct:  556 HNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 619          
BLAST of CX047395 vs. ExPASy Swiss-Prot
Match: NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = -3
Query:  504 AGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVG 698
            A HN ++DCW+ I G VY++T +++ HPGG+E L+ A G+D TD F+ V    + ++M+ E  +G
Sbjct:   63 AQHNKKEDCWICIRGMVYNITPYMEYHPGGEEELMKAAGRDGTDLFDQVHRWVNYESMLKECLIG 127          
The following BLAST results are available for this feature:
BLAST of CX047395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
NIA1_MAIZE4.910e-1141.54Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NIA_PHYIN6.413e-1144.29Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]
NIA_PETHY6.413e-1141.54Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA1_TOBAC6.413e-1140.00Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA_SPIOL8.376e-1138.24Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA_CICIN8.376e-1140.00Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
NIA2_HORVU8.376e-1140.00Nitrate reductase [NADH] (Fragment) OS=Hordeum vul... [more]
NIA1_HORVU8.376e-1140.00Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
NIA1_ARATH8.376e-1140.00Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NB5R4_XENTR8.376e-1141.54Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13H08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13H08-O16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047395 ID=CX047395; Name=CX047395; organism=Citrus sinensis; type=EST; length=700bp
CTTGCACTTAATTAAGGAAATTTAAATAATGTAGGAGAAAGGAAGCCCAA
AGGCCATTTGGACAATTGGTGCTTTCCTTCCTTTCTTTTAGATGAAGATG
CATACGAATAAAAATGAAAGCAAAGCCAAAACGAGGAACTGCAAATTGAT
CATTGCATTCCAAGTCATGCGGGCAGTGAATGGTCACTTATCAAACACAA
GCACATGCCATCACAAAAGATAAAGAACCCTACATTTTCTGGTGATAATA
GTTCCAAACAACTAGTAAAAACAAGGTGCAATGCAACGGATATAGATTTA
TTGTAAATGTATTTTTATCTTGCAAGGTATCATTAAGCGGATTTGGTATA
GAAGCGGATGCCAACAGCCAATCCTAAGATTAGCAGAGGAACTAGGAACT
GGAGGAGCTTTATAATAAACTCGGGTGTCTTGTCTTGGTTGTAGTGAGGC
TGCTTGGGAGGGGTGTACTTGGTCTTGGTGGGAACGGTTGATGAATCAAT
GTCACCCACATAGAATTCATCCATCATCGCTTTTGCACTGCTACTGTGAC
CAACATCCTCAAAGTCATCAGTCGCATCCTTTCCTGTGGCAGACAACAAT
ACCTCGTCTCCACCAGGATGGTCATCCAAGAATTTTGTCACATCATATAC
CTTGCCCTCAATGATAAGCCAACAGTCCTTGCGGTCGTTGTGCCCAGCCT
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