CX047376

Overview
NameCX047376
Unique NameCX047376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.121e-37
Identity = 89/238 (37.39%), Postives = 121/238 (50.84%), Query Frame = 3
Query:  114 APPSVARLTDLFGHV--SVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYP-SKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSAS 818
            +P  +A L  L G    S    F   +G        +G + T  LDK+SGSG  S+ +Y  G     IKL  G S+G V A+YLS   S     DEID E LG+     +V+ TN++  G     RE +FY WFDPTA  H Y+++WN  +I+FLVD +P+R F N  A    YP S+PM +Y ++W+   WAT GGK   ++  APF  S        C    S     +C+  S S
Sbjct:    9 SPLLLASLLILIGVATGSFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLS---SKGETWDEIDFEFLGNVTGQPYVIHTNVFTGG--KGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDCCSRTSIWNWVTCNANSNS 241          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.496e-37
Identity = 88/234 (37.61%), Postives = 128/234 (54.70%), Query Frame = 3
Query:  165 DQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYL-SNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPS-KPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCS---KGSA-SSLDPVDGQTF 848
            +  F   +  +++ +I+ G    L LD SSG G  S+ +Y  G  S  IKL  G S+G V AFY+ S+ DS     DE+D E LG+     + +QTN++A+G     RE++   WFDP+   H Y+I WN   IVF VDNVP+R + N  A    YP  +PM VY T+W+   WAT GG   +N+  APF     + ++ GC +   A  PA+     +GSA   L PV+ +++
Sbjct:   35 EDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSV---RDELDFEFLGNRSGQPYTVQTNVFAHG--KGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSY 263          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.260e-37
Identity = 86/235 (36.60%), Postives = 123/235 (52.34%), Query Frame = 3
Query:  165 DQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPS-KPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCV------LSNSASAPASCSKGSASSLDPVDGQTF 848
            ++ F   +  ++V   N+G   TL LD+ SG+   S   +  G     IKL  G S G V+A+Y+S+      N DEID E LG+     ++LQTN+YA G     REE+ + WFDP    H YSI+WN H IVF+VD +P+R + N G     YP  +PMSV  ++W+G  WAT GG   +++   PFV S  + ++  C+        N  S     +K   SSL  V  + F
Sbjct:   38 NKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQP---NRDEIDFEFLGNVNGQPYILQTNVYAEG--LDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFCNGESTENWWNKNEFSSLTRVQKRWF 267          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.561e-37
Identity = 82/219 (37.44%), Postives = 119/219 (54.34%), Query Frame = 3
Query:  192 GSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSK-PMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSASSLDPVDGQT 845
            G    R  +G + +L+LDKSSGSG  S  ++ +G     +KL  G S+G V  FYL +  +     DEID E LG+   + + L TN+Y  G  S  +E++F+ WFDPT   H Y I WN   I+F VD +P+REF N+ +    +P+K PM +Y ++W+   WAT GG    ++  APF        + GCV +N  S+  + S      LD  +GQT
Sbjct:   40 GRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNLSGHPYTLHTNVYTKG--SGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSSWFTQQLDS-NGQT 252          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.263e-37
Identity = 82/212 (38.68%), Postives = 116/212 (54.72%), Query Frame = 3
Query:  213 NNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSK-PMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSASSLDPVDGQT 845
            N G + +L+LDKSSGSG  S  ++ +G     +KL  G S+G V  FYL +  +     DEID E LG+   + + L TN+Y  G  S  +E++F+ WFDPTA  H Y I WN   I+F VD +P+REF N  +    +P+K PM +Y ++W+   WAT GG    ++  APF        + GCV  N  S   + S+     LD  +GQT
Sbjct:   42 NQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKG--SGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVCPANSQWFTQKLDS-NGQT 247          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.239e-36
Identity = 75/205 (36.59%), Postives = 120/205 (58.54%), Query Frame = 3
Query:  159 SVDQGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAF--SSVYPS-KPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGC 764
            S +  F+  +  ++    ++G +  L+LD  +G G  +++ Y  G+FS  +KL  G S+GVV A+Y+ + +      DEID E LG+     +++QTN+Y NG  +  RE +   WFDPT  +H YSI+WN+H +VF VD VP+R + N+     +  +P+ KPM ++ +IW+   WAT GG    ++K APFV S  +  + GC
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNG--TGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGC 226          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.605e-36
Identity = 81/212 (38.21%), Postives = 118/212 (55.66%), Query Frame = 3
Query:  216 NGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTG-REEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPSK-PMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSASSLDPVDGQT 845
            +G + +L+LDKSSGSG  S  ++ +G     +KL  G S+G V  FYL +  +     DEID E LG+   + + L TN+Y  G   TG +E++F+ WFDPT   H Y I WN   I+F VD +P+REF N  A    +P++ PM +Y ++W+   WAT GG    ++  APF        + GCV +N  S+ ++ S      LD  +GQT
Sbjct:   48 DGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKG---TGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGKSSCSANSPWFTQKLDS-NGQT 252          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.370e-35
Identity = 78/203 (38.42%), Postives = 113/203 (55.67%), Query Frame = 3
Query:  213 NNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTG-REEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYPS-KPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSA 815
            N G++ +L+LDK SGSG  S  ++ +G     +KL  G S+G V  FYL +  +     DEID E LG+   + + L TN+Y  G   TG +E++F+ WFDPT   H Y IIWN   ++F +D +P+REF N+ A    +P  +PM +Y ++W+   WAT GG    ++  APF        +  CV SN  S   SCS  S+
Sbjct:   47 NVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGT---TWDEIDFEFLGNISGHPYTLHTNVYTKG---TGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKS---SCSANSS 240          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.878e-35
Identity = 77/218 (35.32%), Postives = 113/218 (51.83%), Query Frame = 3
Query:  168 QGFSTFFGGSNVKRINNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVYP-SKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGCVLSNSASAPASCSKGSAS 818
            + F   +G        NG + T  LDK SGSG  S+ +Y  G     +KL +G S+G V A+YLS+  +     DEID E LG+   + + + TN++  G     RE +F  WFDPTA  H Y++ WN  +I+FLVD +P+R F N       YP ++PM +Y ++W+   WAT GG+  +++  APF  S             S+S   +C   S S
Sbjct:   32 ESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTA---WDEIDFEFLGNRTGHPYTIHTNVFTGG--KGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFNDQSSCSRTSSSKWVTCEPNSNS 244          
BLAST of CX047376 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.374e-34
Identity = 75/186 (40.32%), Postives = 104/186 (55.91%), Query Frame = 3
Query:  210 INNGSMATLALDKSSGSGLVSRNKYYHGFFSAAIKLPSGLSSGVVLAFYLSNADSYPHNHDEIDIELLGHDKRNDWVLQTNIYANGGVSTGREEKFYFWFDPTAQHHYYSIIWNSHHIVFLVDNVPVREFPNTGAFSSVY-PSKPMSVYVTIWDGSQWATHGGKYPVNYKYAPFVVSLAEMEMAGC 764
            +N G +  L LD  SG+G  SR+KY  G  S  IKL  G S+G V AFY+S+      NH+E D E LG+     +++QTNIY NG     RE++   WFDPT + H YSI+W+   +VF+VD  P+R   N       +   + M VY +IW+   WAT GG    ++ +APFV S  E ++  C
Sbjct:   43 VNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGP---NHNEFDFEFLGNTTGEPYIVQTNIYVNG--VGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDAC 223          
The following BLAST results are available for this feature:
BLAST of CX047376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH12_ARATH1.121e-3737.39Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH2.496e-3737.61Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH3.260e-3736.60Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH5.561e-3737.44Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH7.263e-3738.68Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH1.239e-3636.59Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH3.605e-3638.21Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH1.370e-3538.42Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH14_ARATH8.878e-3535.32Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH9_ARATH3.374e-3440.32Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13G08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13G08-M16-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047376 ID=CX047376; Name=CX047376; organism=Citrus sinensis; type=EST; length=856bp
CAAAATCAAGTGAAGCACAAATGGCTCTTTTACTACTAAACAATCTAATT
TTAGCATTCCTCTTGTTCTTTTGCATTATGGCACCCAAGGTTTCTTCACA
CAACAGGGCTTACGCGCCCCCAAGTGTTGCACGCTTGACAGATCTTTTTG
GTCACGTCTCAGTTGATCAGGGCTTTTCCACTTTCTTCGGAGGCTCAAAT
GTCAAGCGGATCAATAATGGGTCCATGGCCACTCTTGCTCTTGACAAATC
CTCAGGCTCTGGATTGGTCTCCAGGAACAAATATTACCACGGATTCTTCA
GTGCTGCTATAAAGTTGCCATCTGGTCTCTCATCCGGAGTTGTACTTGCC
TTCTACTTGTCTAATGCAGATAGCTATCCGCACAACCATGATGAAATTGA
TATTGAATTGCTTGGTCATGATAAGAGAAATGACTGGGTTCTACAAACAA
ACATATATGCGAATGGAGGTGTCAGTACCGGAAGAGAAGAGAAATTTTAC
TTCTGGTTCGATCCAACGGCACAGCACCATTACTACAGCATTATCTGGAA
CAGCCATCACATTGTATTTCTAGTGGACAATGTACCGGTGAGAGAGTTTC
CAAACACTGGGGCCTTTTCTTCTGTATACCCATCAAAGCCAATGTCAGTT
TATGTGACAATATGGGATGGATCACAGTGGGCAACTCATGGAGGAAAATA
TCCAGTTAATTACAAGTATGCACCATTTGTGGTTTCACTGGCTGAAATGG
AAATGGCTGGCTGTGTGTTATCAAATTCTGCCTCTGCTCCTGCTTCGTGC
TCGAAAGGAAGTGCTTCAAGCTTGGATCCAGTTGATGGACAAACATTTAC
TACACT
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