CX047363

Overview
NameCX047363
Unique NameCX047363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.111e-14
Identity = 40/83 (48.19%), Postives = 50/83 (60.24%), Query Frame = -1
Query:  199 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 447
            GE  V C  +SS+P + FTI G  + + P  YIL+     +  CISGF  MDVP   G LWILGDVF+ +Y TVFD    +VG
Sbjct:  305 GEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQ----SQGSCISGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVG 383          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.063e-14
Identity = 40/83 (48.19%), Postives = 49/83 (59.04%), Query Frame = -1
Query:  199 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 447
            GE  V C  +SS+P + FTI G  + L P  YIL+     +  C SGF  MDVP   G LWILGDVF+ +Y TVFD    +VG
Sbjct:  305 GEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQ----SQGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVG 383          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.063e-14
Identity = 40/83 (48.19%), Postives = 49/83 (59.04%), Query Frame = -1
Query:  199 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 447
            GE  V C  +SS+P + FTI G  + L P  YIL+     +  C SGF  MDVP   G LWILGDVF+ +Y TVFD    +VG
Sbjct:  305 GEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQ----SQGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVG 383          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.063e-14
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = -1
Query:  199 SPM-GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 456
            +PM GE AV+C  L+ MP V+F I G  + LS   Y L         C SGF  +D+ PP GPLWILGDVF+ ++++VFD G  RVG
Sbjct:  304 TPMDGEYAVECENLNIMPDVTFVINGVPYTLSATAYTLPDFVDGMQFCGSGFQGLDIQPPAGPLWILGDVFIRQFYSVFDRGSNRVG 390          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.306e-14
Identity = 41/60 (68.33%), Postives = 44/60 (73.33%), Query Frame = -1
Query:  196 FDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 375
            F L+PE+YILK   G   QCISGFTAMD     GPLWILGDVFM  YHTVFD+G L VGF
Sbjct:  207 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGF 262          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.306e-14
Identity = 41/60 (68.33%), Postives = 44/60 (73.33%), Query Frame = -1
Query:  196 FDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 375
            F L+PE+YILK   G   QCISGFTAMD     GPLWILGDVFM  YHTVFD+G L VGF
Sbjct:  222 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGF 277          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.306e-14
Identity = 41/60 (68.33%), Postives = 44/60 (73.33%), Query Frame = -1
Query:  196 FDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 375
            F L+PE+YILK   G   QCISGFTAMD     GPLWILGDVFM  YHTVFD+G L VGF
Sbjct:  165 FGLTPEQYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGF 220          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.182e-13
Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = -1
Query:  199 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 447
            GE  V C  +SS+P + FTI G  + + P  YIL+     +  C SGF  MDVP   G LWILGDVF+ +Y TVFD    +VG
Sbjct:  305 GEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQ----SQGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVG 383          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.544e-13
Identity = 38/83 (45.78%), Postives = 48/83 (57.83%), Query Frame = -1
Query:  199 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 447
            G+  V C  + S+P + FTI G  + L    YIL+     +  C SGF  MD+P P G LWILGDVF+ +Y  VFD G  RVG
Sbjct:  304 GQMVVSCSSIQSLPDIVFTINGIQYPLPASAYILQ----NQQDCTSGFQGMDIPTPSGELWILGDVFIRQYFAVFDRGNNRVG 382          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.016e-13
Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = -1
Query:  196 ESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 444
            E  V C ++ ++P +SF +GG+ + LS  +Y+L+     +  C     AMD+PPP GP+W+LG  F+ +++T FD    R+GF
Sbjct:  315 EYVVSCSQVPTLPDISFNLGGRAYTLSSTDYVLQYPNRRDKLCTVALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGF 397          
The following BLAST results are available for this feature:
BLAST of CX047363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PEPA2_MACFU3.111e-1448.19Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEPA_MACMU4.063e-1448.19Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA4_MACFU4.063e-1448.19Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
CATE_RABIT4.063e-1448.28Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
CARDG_CYNCA5.306e-1468.33Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDF_CYNCA5.306e-1468.33Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDE_CYNCA5.306e-1468.33Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PEPA1_MACFU1.182e-1346.99Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPA_SUNMU1.544e-1345.78Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
RENI2_MOUSE2.016e-1337.35Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13F12-K24-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047363 ID=CX047363; Name=CX047363; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTGAAAGAAAAAATATTTACAAGCAAACATGAAATCGTTTTATAG
CCATCACGTCTGAGGCTAACGGCTTCACATGATTTTATCACCAACTCCAT
TATAAGGGTACATAATATATATCTTAGCGAATAGAAGACATGAAGGATTA
TATCGAAAGAGAAGCGGCCTAAAGATCCATTTATGCAGCCTCAGCAAATC
CGACTCTGAGCTCACCGAAATCAAAGACTGTATGGTAGCGACCCATGAAG
ACGTCTCCCAAGATCCAGAGAGGACCACGGGGAGGGGGAACATCCATAGC
AGTAAATCCACTAATGCACTGAGCCTCAGGACCTTCGCCCACCTTCAGAA
TGTACTCCTCTGGAGAGAGGTCAAACACTTTGCCACCAATAGTGAACGAA
ACAATAGGCATGGAAGAGAGCTTTCCACAATCAACTGCTGATTCTCCCAT
TGGGCTTGGCATTCGGTCACAAAGCTCATTGACATATTGCAAAATGTTTT
CTTGTGTTTGATTCTGCTGAAGCTGGTTTTGCATCCATACAACTGCCATC
TCACAAGCAGAGCACATAGCATTATTAAGAACACCGGAAGACTTGTCGTT
GCTCTCATCCACCACACTCTCGATGCCCATACTAACACCACGTTTTCCAT
CAAAGGTGCACAATCCCATTTGGGAGCAAATTTTCTTAGGATGTGCCTCA
AACAGAAGAAGATCCAAAATTGTTTGTCCGTATTGCTCAACAACTGCCTT
GCATTGTTGGCTAACAACTCCAGAGGCTCCAATAGCATGATTTATCATGG
TAATCACAGTCGTTGGACCTGCCAACAAAGAAGTACCAGAATCTGCAATT
GCTGAACAACCTCCAGCACAATATCC
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