CX047363

Overview
NameCX047363
Unique NameCX047363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = -1
Query:  196 VDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 435
            V+C ++ ++P +SF +GG+ + LS  +Y+ K     +  CI     +D+PPP GP+W+LG  F+ +++T FD    R+GF
Sbjct:  319 VNCSQVPTLPDISFYLGGRTYTLSNMDYVQKNPFRNDDLCILALQGLDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGF 398          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = -1
Query:  196 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRG-PLWILGDVFMGRYHTVFDFGELRVGF 447
            GE  VDC    S+P  +F I G  F LSP  YIL      + QC+ G  A  +    G PLWILGDVF+  Y++VFD    RVGF
Sbjct:  304 GEFLVDCDSTESLPTFTFVINGVEFPLSPSAYILNT----DGQCMVGVEATYLSSQDGEPLWILGDVFLRAYYSVFDMANNRVGF 384          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-11
Identity = 30/83 (36.14%), Postives = 50/83 (60.24%), Query Frame = -1
Query:  196 ESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 444
            E  V+C ++ ++P +SF +GGK + L+  +Y+L+        C      MD+PPP GP+W+LG  F+ +++T FD    R+GF
Sbjct:  315 EYVVNCNQMPTLPDISFHLGGKAYTLTSADYVLQDPYN-NISCTLALHGMDIPPPTGPVWVLGATFIRKFYTEFDRRNNRIGF 396          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-11
Identity = 36/85 (42.35%), Postives = 44/85 (51.76%), Query Frame = -1
Query:  196 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRG-PLWILGDVFMGRYHTVFDFGELRVGF 447
            G   V+C  + SMP ++F I G    L P  Y+L         C  G     +P P G PLWILGDVF+  Y+TVFD    RVGF
Sbjct:  306 GNFVVNCNSIQSMPTITFVISGSPLPLPPSTYVLN----NNGYCTLGIEVTYLPSPNGQPLWILGDVFLREYYTVFDMAANRVGF 386          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = -1
Query:  199 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 447
            GE  V C  +SS+P + FTI G  + +    YIL+     E  C SGF  M++P   G LWILGDVF+ +Y  VFD    +VG
Sbjct:  304 GEMVVSCSAISSLPDIVFTINGIQYPVPASAYILQ----DEGGCTSGFQGMNIPTAYGELWILGDVFIRQYFAVFDRANNQVG 382          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = -1
Query:  199 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 447
            G+  VDC K  S+P ++ T  G  F L+P +YIL+V       CIS FT MD P P G L I+GD F+ +Y++++D  +  VG
Sbjct:  335 GQYQVDCAKRDSLPDLTLTFAGYNFTLTPYDYILEVS----GSCISVFTPMDFPQPIGDLAIVGDAFLRKYYSIYDLDKNAVG 413          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = -1
Query:  199 AVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 438
            +V C  L+ M  V+F I G  + L+P  Y L         C +GF  +++ PP GPLWILGDVF+ +++ VFD G  RVG
Sbjct:  306 SVQCANLNMMLDVTFIINGVPYTLNPTAYTLLDFVDGMQVCSTGFEGLEIQPPAGPLWILGDVFIRQFYAVFDRGNNRVG 385          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 35/85 (41.18%), Postives = 47/85 (55.29%), Query Frame = -1
Query:  196 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRG-PLWILGDVFMGRYHTVFDFGELRVGF 447
            G+ AV+C  + S+P ++F I G  F L P  Y+L         C  G     +P   G PLWILGDVF+  Y++V+D G  RVGF
Sbjct:  305 GQLAVNCNSIQSLPTLTFIINGVQFPLPPSAYVLNTN----GYCFLGVEPTYLPSQNGQPLWILGDVFLRSYYSVYDMGNNRVGF 385          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = -1
Query:  196 VDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 435
            V C +  ++P +SF +GGK + L+  +Y+ +     +  C     AMD+PPP GP W LG  F+ +++T FD    R+GF
Sbjct:  323 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGF 402          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = -1
Query:  196 VDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 435
            V C +  ++P +SF +GGK + L+  +Y+ +     +  C     AMD+PPP GP W LG  F+ +++T FD    R+GF
Sbjct:  323 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGF 402          
The following BLAST results are available for this feature:
BLAST of CX047363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
RENI_RAT1.106e-1136.25Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
PEPC_RABIT1.106e-1145.88Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
RENI_SHEEP1.445e-1136.14Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPB_CANFA1.445e-1142.35Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
PEPA_CALJA1.887e-1143.37Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
CARPV_CANAL1.887e-1142.17Vacuolar aspartic protease OS=Candida albicans GN=... [more]
CATE_CAVPO2.465e-1142.50Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
PEPC_SUNMU4.204e-1141.18Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
RENI_PANTR7.171e-1136.25Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_MACMU7.171e-1136.25Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13F12-K24-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047363 ID=CX047363; Name=CX047363; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTGAAAGAAAAAATATTTACAAGCAAACATGAAATCGTTTTATAG
CCATCACGTCTGAGGCTAACGGCTTCACATGATTTTATCACCAACTCCAT
TATAAGGGTACATAATATATATCTTAGCGAATAGAAGACATGAAGGATTA
TATCGAAAGAGAAGCGGCCTAAAGATCCATTTATGCAGCCTCAGCAAATC
CGACTCTGAGCTCACCGAAATCAAAGACTGTATGGTAGCGACCCATGAAG
ACGTCTCCCAAGATCCAGAGAGGACCACGGGGAGGGGGAACATCCATAGC
AGTAAATCCACTAATGCACTGAGCCTCAGGACCTTCGCCCACCTTCAGAA
TGTACTCCTCTGGAGAGAGGTCAAACACTTTGCCACCAATAGTGAACGAA
ACAATAGGCATGGAAGAGAGCTTTCCACAATCAACTGCTGATTCTCCCAT
TGGGCTTGGCATTCGGTCACAAAGCTCATTGACATATTGCAAAATGTTTT
CTTGTGTTTGATTCTGCTGAAGCTGGTTTTGCATCCATACAACTGCCATC
TCACAAGCAGAGCACATAGCATTATTAAGAACACCGGAAGACTTGTCGTT
GCTCTCATCCACCACACTCTCGATGCCCATACTAACACCACGTTTTCCAT
CAAAGGTGCACAATCCCATTTGGGAGCAAATTTTCTTAGGATGTGCCTCA
AACAGAAGAAGATCCAAAATTGTTTGTCCGTATTGCTCAACAACTGCCTT
GCATTGTTGGCTAACAACTCCAGAGGCTCCAATAGCATGATTTATCATGG
TAATCACAGTCGTTGGACCTGCCAACAAAGAAGTACCAGAATCTGCAATT
GCTGAACAACCTCCAGCACAATATCC
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