CX047363

Overview
NameCX047363
Unique NameCX047363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = -1
Query:  196 VDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 435
            V C +  ++P +SF +GGK + L+  +Y+ +     +  C     AMD+PPP GP W LG  F+ +++T FD    R+GF
Sbjct:  323 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGF 402          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = -1
Query:  196 VDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVGF 435
            V C +  ++P +SF +GGK + L+  +Y+ +     +  C     AMD+PPP GP W LG  F+ +++T FD    R+GF
Sbjct:  323 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGF 402          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = -1
Query:  196 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRG-PLWILGDVFMGRYHTVFDFGELRVGF 447
            G+  V+C  + ++P ++F I G  F L P  Y+L         C  G     +P P G PLWILGDVF+  Y++V+D G  RVGF
Sbjct:  305 GQMVVNCNNIQNLPTLTFVINGVQFPLLPSAYVLN----NNGYCTLGVEPTYLPSPTGQPLWILGDVFLRSYYSVYDMGNNRVGF 385          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = -1
Query:  199 MGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWILGDVFMGRYHTVFDFGELRVG 450
            +GE+ + C  + S+P + FTI    + L    YILK  +     C+SGF  M++    G LWILGDVF+ +Y TVFD    +VG
Sbjct:  303 LGENIISCSAIDSLPDIVFTINNVQYPLPASAYILKEDD----DCLSGFDGMNLDTSYGELWILGDVFIRQYFTVFDRANNQVG 382          
BLAST of CX047363 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 34/85 (40.00%), Postives = 45/85 (52.94%), Query Frame = -1
Query:  196 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRG-PLWILGDVFMGRYHTVFDFGELRVGF 447
            G+  V+C  +  MP ++F I G  F L P  Y+          C  G  A  +P P G PLWILGDVF+  Y++V+D    RVGF
Sbjct:  307 GDFMVNCNYIQDMPTITFVINGSQFPLPPSAYVFN----NNGYCRLGIEATYLPSPNGQPLWILGDVFLKEYYSVYDMANNRVGF 387          
The following BLAST results are available for this feature:
BLAST of CX047363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
RENI_MACFA7.171e-1136.25Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
RENI_HUMAN7.171e-1136.25Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
PEPC_SORUN7.171e-1140.00Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
PEPA1_RABIT7.171e-1140.48Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPC_MONDO9.366e-1140.00Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13F12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13F12-K24-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047363 ID=CX047363; Name=CX047363; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTGAAAGAAAAAATATTTACAAGCAAACATGAAATCGTTTTATAG
CCATCACGTCTGAGGCTAACGGCTTCACATGATTTTATCACCAACTCCAT
TATAAGGGTACATAATATATATCTTAGCGAATAGAAGACATGAAGGATTA
TATCGAAAGAGAAGCGGCCTAAAGATCCATTTATGCAGCCTCAGCAAATC
CGACTCTGAGCTCACCGAAATCAAAGACTGTATGGTAGCGACCCATGAAG
ACGTCTCCCAAGATCCAGAGAGGACCACGGGGAGGGGGAACATCCATAGC
AGTAAATCCACTAATGCACTGAGCCTCAGGACCTTCGCCCACCTTCAGAA
TGTACTCCTCTGGAGAGAGGTCAAACACTTTGCCACCAATAGTGAACGAA
ACAATAGGCATGGAAGAGAGCTTTCCACAATCAACTGCTGATTCTCCCAT
TGGGCTTGGCATTCGGTCACAAAGCTCATTGACATATTGCAAAATGTTTT
CTTGTGTTTGATTCTGCTGAAGCTGGTTTTGCATCCATACAACTGCCATC
TCACAAGCAGAGCACATAGCATTATTAAGAACACCGGAAGACTTGTCGTT
GCTCTCATCCACCACACTCTCGATGCCCATACTAACACCACGTTTTCCAT
CAAAGGTGCACAATCCCATTTGGGAGCAAATTTTCTTAGGATGTGCCTCA
AACAGAAGAAGATCCAAAATTGTTTGTCCGTATTGCTCAACAACTGCCTT
GCATTGTTGGCTAACAACTCCAGAGGCTCCAATAGCATGATTTATCATGG
TAATCACAGTCGTTGGACCTGCCAACAAAGAAGTACCAGAATCTGCAATT
GCTGAACAACCTCCAGCACAATATCC
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