CX047344

Overview
NameCX047344
Unique NameCX047344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_STRPN (Glucose-6-phosphate 1-dehydrogenase OS=Streptococcus pneumoniae GN=zwf PE=3 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.496e-41
Identity = 93/244 (38.11%), Postives = 147/244 (60.25%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            + + GASGDLAK+K +P+LF LY+ G L S    + G AR   S +   + +   +++       +EQ  EF     Y S   +  E +  L +++ A  + K   E +  +LF+ ++ P  + ++++ +K    N  D  G+ R++VEKPFG D  ++ KL+ ++   F+E QI+RIDHYLGKE++Q++  +RFAN +F  +WN+D IDNVQI F E  G E RGGY+D+ G +RD++QNH L
Sbjct:    7 VTIFGASGDLAKRKLYPSLFRLYQSGNL-SKHFAVIGTARRPWSKEYFESVVVESILD---LADSTEQAQEFASHFYYQSHDVNDSEHYIAL-RQLQAELNEKYQAEHN--KLFFLSMAPQFFGTIAKHLKS--ENIVDGKGFERLIVEKPFGTDYATASKLNDELLATFDEEQIFRIDHYLGKEMIQSIFAVRFANLIFENVWNKDFIDNVQITFAERLGVEERGGYYDQSGALRDMVQNHTL 241          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.260e-41
Identity = 94/254 (37.01%), Postives = 143/254 (56.30%), Query Frame = 3
Query:  189 GCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQ------SEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLP-LWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHL 929
            G +SII+LGA+GDLAKK  +  LF LY     ++ + H F +    ++  +   ++    +   S P         E   +FLQL +Y      T E +Q L+K+I          E    R+FYF++PP  Y  ++R I   C  R   G W R+V EKPFG D  S+++L++++G  F+E ++YR+DHYLGK+ V  +L  R  NR  L  LWNR +++ V+I+ +E    EGR  +++EYG+IRD +QNHL
Sbjct:   21 GHVSIILLGATGDLAKKYLWQGLFQLYLD---EAGKGHSFSFHGAALTAPQQGQKLMDKALESLSCPKDLVPSRCDELKGQFLQLSQY--HQLKTVEDYQTLNKDIETQVQQDGLWEAG--RIFYFSVPPFAYADIARNINSSC--RPHPGAWLRVVFEKPFGHDHLSAQQLASELGSFFQEEEMYRVDHYLGKQAVAQILPFRDQNRKALDGLWNRHHVERVEIILKETIDAEGRASFYEEYGVIRDTLQNHL 265          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_ANASP (Glucose-6-phosphate 1-dehydrogenase OS=Anabaena sp. (strain PCC 7120) GN=zwf PE=3 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.260e-41
Identity = 97/244 (39.75%), Postives = 143/244 (58.61%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            I++ GASGDL  +K  PAL+ L R+  +   E  I G AR + S +  R +++  +    S+    E   +F Q + Y  G  D  E +Q L K + +    K    G+  R+FY ++ P+ +P   + +    M   D     R+V+EKPFG+DL S++ L+A + +  +E Q+YRIDHYLGKE VQNLLV RFAN +F PLWNR  +D+VQI   E  G E R GY+++ G +RD++QNHL+
Sbjct:   24 IVIFGASGDLTWRKLVPALYKLRRERRIPP-ETTIVGVARREWSHEYFREQMQKGMEEAHSSVELGELWQDFSQGLFYCPGDIDNPESYQKL-KNLLSELDEKRGTRGN--RMFYLSVAPNFFPEAIKQLGGAGM--LDDPYKHRLVIEKPFGRDLASAQSLNAVVQKYCKEHQVYRIDHYLGKETVQNLLVFRFANAIFEPLWNRQFVDHVQITVAETVGVEDRAGYYEKAGALRDMLQNHLM 261          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD4_ARATH (Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.260e-41
Identity = 101/262 (38.55%), Postives = 148/262 (56.49%), Query Frame = 3
Query:  159 SRDNDNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLI----NDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            S D  +V     L I V+GA+G+LA+ K FPALF LY  G+L   +V IFG +R  ++D++LR+ I   L     + ++  G+ +    F     Y++G Y+  +G   L + +   E      E  + R+FY ++P      V+  I     N     GWTRI+VEKPFG +  SS +L+  +   FEE QIYRIDH LG+ L++NL VLRF+N +F PLWNR  I N+Q++  E      +  + D YGIIRDI+ +H+L
Sbjct:  142 SDDLSDVRRRASLCIAVVGATGELARGKIFPALFALYYSGYLPE-DVAIFGVSRKNLTDEDLRSIIASTLTCRVDHQENCGGKMDA---FQSRTYYINGGYNNRDGMSRLAERMKQIEG-----ESEANRIFYLSVPQEALVDVACTIGD---NAQAPRGWTRIIVEKPFGFNSHSSHQLTKSLLSKFEEKQIYRIDHMLGRNLIENLTVLRFSNLVFEPLWNRTYIRNIQVIISESIAQTEK--FSDGYGIIRDIVHSHIL 389          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_SYNE7 (Glucose-6-phosphate 1-dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=zwf PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 5.560e-41
Identity = 100/255 (39.22%), Postives = 145/255 (56.86%), Query Frame = 3
Query:  171 DNVPETGCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGS-SRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            D VPE   L  ++ GA+GDL ++K  PA++ ++ +  L   E+ I G AR   SDD  R  +R  +          E  + F Q + +  G+ D  + +Q L   ++    + + L G+   R FY ++ P  +   ++ +    M        TR+VVEKPFG+DL S++ L+A +  +  E QIYRIDHYLGKE VQNLLV RFAN +F PLWNR  ID+VQI   E  G EGR GY++  G +RD++QNHL+
Sbjct:   17 DKVPEPQIL--VIFGATGDLTQRKLVPAIYEMHLERRLPP-ELTIVGVARRDWSDDYFREHLRQGVEQFGGGIQAEEVWNTFAQGLFFAPGNIDDPQFYQTLRDRLA----NLDELRGTRGNRTFYLSVAPRFFGEAAKQLGAAGMLADPAK--TRLVVEKPFGRDLSSAQVLNAILQNVCRESQIYRIDHYLGKETVQNLLVFRFANAIFEPLWNRQYIDHVQITVAETVGLEGRAGYYETAGALRDMVQNHLM 262          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PE_RABIT (GDH/6PGL endoplasmic bifunctional protein OS=Oryctolagus cuniculus GN=H6PD PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.759e-40
Identity = 91/254 (35.83%), Postives = 145/254 (57.09%), Query Frame = 3
Query:  189 GCLSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQ------SEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFL-PLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHL 929
            G +S+I+LGA+GDLAKK  +  LF L+     ++ + H F +    ++  +    +    +   S P        +E  ++FL+L +Y      T E +Q L ++I A    +   E    R+FYF++PP  Y  ++R I   C  R   G W R+V+EKPFG D  S+++L+ ++G  F+E ++YR+DHYLGK+ V  +L  R  NR  L  LWNR +++ V+I+ +E    EGR  +++EYG+IRD +QNHL
Sbjct:    5 GHVSVILLGATGDLAKKYLWQGLFQLFLD---EAGKGHSFSFHGAALTAPKQGQELMAKALESLSCPRDMAPSLCAELQAQFLRLSRY--RQLKTAEDYQALGRDIEAQVQQEGLREAG--RMFYFSVPPFAYADIARNINSSC--RPGPGAWLRVVLEKPFGHDHLSAQQLATELGSFFQEEEMYRVDHYLGKQAVAQILPFRDQNRRALDSLWNRHHVERVEIIMKETVDAEGRTSFYEEYGVIRDTLQNHL 249          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_BACSU (Glucose-6-phosphate 1-dehydrogenase OS=Bacillus subtilis GN=zwf PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.707e-40
Identity = 85/244 (34.84%), Postives = 144/244 (59.02%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            I++ GA+GDLAK+K +P++  LY+ G +   E  + G  R   S+++LR  ++  +     +    + + +F     Y          +Q L+  ++  E   ++ +  + R+FY A+ P  + ++++ +K   +  +   GW+R+V+EKPFG DL S++ L+ +I E F E QIYRIDHYLGK++VQN+ V+RFAN +F PLW    I N+QI   E  G E R  Y+++ G +RD++QNH++
Sbjct:   11 IVIFGATGDLAKRKLYPSIHRLYQNGQI-GEEFAVVGVGRRPWSNEDLRQTVKTSI-----SSSADKHIDDFTSHFYYHPFDVTNPGSYQELNVLLNQLE---DTYQIPNNRMFYLAMAPEFFGTIAKTLKSEGVTATT--GWSRLVIEKPFGHDLPSAQALNKEIREAFTEDQIYRIDHYLGKQMVQNIEVIRFANAIFEPLWTNRYISNIQITSSESLGVEDRARYYEKSGALRDMVQNHIM 243          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_NOSP7 (Glucose-6-phosphate 1-dehydrogenase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=zwf PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.029e-40
Identity = 95/244 (38.93%), Postives = 138/244 (56.56%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            I++ GASGDL  +K  PAL+ L R+  +   E  I G AR + S +  R +++  +          E   +F Q + Y  G  D  E +Q L K + +    K    G+  R+FY ++ PS +P   + +    M         R+V+EKPFG+DL S++ L+  + +  +E Q+YRIDHYLGKE VQNLLV RFAN +F PLWNR  +D+VQI   E  G E R GY++  G +RD++QNHL+
Sbjct:   24 IVIFGASGDLTWRKLVPALYKLRRERRIPP-ETTIVGVARREWSHEYFREQMQKGMEEAHPDVDLGELWQDFSQGLFYSPGDIDNPESYQKL-KTLLSELDEKRGTRGN--RMFYLSVAPSFFPEAIKQLGSGGMLEDPYKH--RLVIEKPFGRDLASAQSLNQVVQKYCKEHQVYRIDHYLGKETVQNLLVFRFANAIFEPLWNRQFVDHVQITVAETVGVEDRAGYYESAGALRDMLQNHLM 261          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_CHLMU (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia muridarum GN=zwf PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.029e-40
Identity = 91/248 (36.69%), Postives = 140/248 (56.45%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQ-LIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGG---WTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA+GDL  +K FPAL+NL ++G L  N V + G+AR   S ++ R  +R  + N   +     +V E L+  I Y   ++   EG+  L   +   ES          RLFY + PP  +  + R + +  +   + G    W+R+++EKPFG DL ++++L   I     E  +YRIDHYLGKE VQN+L +RFAN +F   WN   ID+VQI   E  G   RG +F++ G++RD++QNHL+
Sbjct:   19 MVIFGATGDLTARKLFPALYNLTKEGRLSENFVCV-GFARRPKSHEQFREEMRQAIQNFSHSSEIDIRVWESLEHRIFYHQANFSEAEGYSSLRSFL---ESVDQKYGTKGNRLFYLSTPPDYFQEIIRNLNRHQLFYHEQGAQQPWSRLIIEKPFGVDLQTAQELQQCIDANINEESVYRIDHYLGKETVQNILTIRFANTLFESCWNSQYIDHVQISVSESIGIGSRGNFFEKSGMLRDMVQNHLM 262          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_LEUME (Glucose-6-phosphate 1-dehydrogenase OS=Leuconostoc mesenteroides GN=zwf PE=1 SV=4)

HSP 1 Score: 162.54 bits (410), Expect = 3.051e-39
Identity = 85/244 (34.84%), Postives = 140/244 (57.38%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +   G +GDLAK+K +P++FNLY++G+LQ +   I G AR  ++DDE +  +R  +   K       Q   F++   Y +        + +L KE     + K  ++G+  R+FY ++ P  + ++++ +K   +      G+ R+++EKPFG   D++ +L   +   F++ Q++RIDHYLGKE+VQN+  LRF N +F   WN+D I NVQ+   E  G E R GY+D  G + D+IQNH +
Sbjct:    9 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFA-IVGTARQALNDDEFKQLVRDSI---KDFTDDQAQAEAFIEHFSYRAHDVTDAASYAVL-KEAIEEAADKFDIDGN--RIFYMSVAPRFFGTIAKYLKSEGLLADT--GYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNHTM 243          
The following BLAST results are available for this feature:
BLAST of CX047344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
G6PD_STRPN2.496e-4138.11Glucose-6-phosphate 1-dehydrogenase OS=Streptococc... [more]
G6PE_MOUSE3.260e-4137.01GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
G6PD_ANASP3.260e-4139.75Glucose-6-phosphate 1-dehydrogenase OS=Anabaena sp... [more]
G6PD4_ARATH3.260e-4138.55Glucose-6-phosphate 1-dehydrogenase 4, chloroplast... [more]
G6PD_SYNE75.560e-4139.22Glucose-6-phosphate 1-dehydrogenase OS=Synechococc... [more]
G6PE_RABIT2.759e-4035.83GDH/6PGL endoplasmic bifunctional protein OS=Oryct... [more]
G6PD_BACSU4.707e-4034.84Glucose-6-phosphate 1-dehydrogenase OS=Bacillus su... [more]
G6PD_NOSP78.029e-4038.93Glucose-6-phosphate 1-dehydrogenase OS=Nostoc punc... [more]
G6PD_CHLMU8.029e-4036.69Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia m... [more]
G6PD_LEUME3.051e-3934.84Glucose-6-phosphate 1-dehydrogenase OS=Leuconostoc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13F02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13F02-K4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047344 ID=CX047344; Name=CX047344; organism=Citrus sinensis; type=EST; length=932bp
AAAATTCAACCTTTTAGGAACATAATACTCGCAATCAAACATCCTTGTTT
TCAACTCCAGCAACAATCTTTCTTCGTTCAGTTTTCAACAGAGAGTAGGA
GATGGGATCAGGTCAATGGATAATGGAGAAAAGGTCAAGTTTGAGGAATG
TTTCATTCTCAAGAGACAATGACAATGTGCCTGAAACTGGATGTCTTTCA
ATTATCGTTCTTGGTGCTTCTGGAGATCTTGCCAAGAAAAAGACTTTTCC
TGCTCTCTTCAATCTTTATCGGCAGGGGTTTTTACAGTCAAATGAAGTTC
ACATATTTGGCTATGCAAGGACTAAGATTTCGGATGATGAGCTGAGAAAT
CGCATTCGTGGATATCTTATCAATGACAAAAGCGCACCGGGACAATCAGA
GCAAGTATCAGAGTTTTTGCAGCTGATTAAATATGTAAGTGGTTCTTATG
ACACCGAGGAGGGCTTTCAATTGCTGGACAAGGAAATTTCTGCACATGAA
TCATCAAAAAACAGTTTGGAAGGATCATCTCGTAGACTCTTTTATTTTGC
ACTTCCACCGTCTGTATATCCATCTGTTTCCAGGATGATTAAGAAGTGCT
GCATGAATAGATCTGATCTTGGTGGCTGGACACGTATTGTTGTTGAGAAG
CCATTTGGCAAGGATTTGGACTCATCTGAGAAACTTAGTGCCCAGATTGG
GGAGTTGTTTGAAGAACCACAAATCTACCGTATTGATCACTATTTGGGAA
AGGAACTGGTGCAAAACTTGTTGGTACTACGCTTTGCAAATCGTATGTTT
TTGCCCCTTTGGAATCGTGACAACATTGACAATGTACAGATTGTCTTCAG
AGAAGATTTTGGAACTGAAGGTCGTGGAGGATATTTTGATGAATATGGGA
TTATCCGTGATATTATTCAAAATCATCTATTA
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