CX047344

Overview
NameCX047344
Unique NameCX047344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_CHLPN (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia pneumoniae GN=zwf PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.514e-38
Identity = 85/247 (34.41%), Postives = 137/247 (55.47%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCM---NRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA+GDL  +K  PAL++L ++G L    V + G+AR + S++  R  ++  +I    +    +   +F Q + Y    +D   G+  L   +   E    +      RLFY + PP  +  +   + K  +   N+     W+R+++EKPFG+DLDS+++L   I E   E  +Y IDHYLGKE VQN+L  RFAN +F   WN   ID+VQI   E  G   RG +F++ G++RD++QNH++
Sbjct:   23 LVIFGATGDLTARKLLPALYHLTKEGRLSDQFVCV-GFARREKSNELFRQEMKQAVIQFSPSELDIKVWEDFQQRLFYHRSEFDNNMGYTSLKDSL---EDLDKTYGTRGNRLFYLSTPPQYFSRIIENLNKHKLFYKNQDQGKPWSRVIIEKPFGRDLDSAKQLQQCINENLNENSVYHIDHYLGKETVQNILTTRFANTIFESCWNSQYIDHVQISLSETIGIGSRGNFFEKSGMLRDMVQNHMM 265          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_DICD3 (Glucose-6-phosphate 1-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=zwf PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.729e-37
Identity = 89/244 (36.48%), Postives = 131/244 (53.69%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA GDLA++K  P+L+ L + G +   E  I G  R +   D     +R  L      P      +     + + +   +  EGF+ L   +     +          + YFA+PPS + ++ R + +  +N+       R+V+EKP G +L SS  ++ Q+ E F E Q+YRIDHYLGKE V NLL LRFAN +F   W+   ID+VQI   E+ G EGR GYFD+ G +RD+IQNHLL
Sbjct:   12 LVIFGAKGDLARRKLLPSLYQLEKAGHIHP-ETRIIGVGRAEWDRDAYIKVVREALETFLKEPLDPALWTTLSNRLDFCNLDVEDTEGFKRLGTMLDQQNRTT---------INYFAMPPSTFGAICRGLGQAGLNKEP----ARVVMEKPLGTNLASSRVINNQVAEFFNECQVYRIDHYLGKETVLNLLALRFANSLFANNWDNRTIDHVQITVAEEVGIEGRWGYFDQAGQMRDMIQNHLL 241          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_BORBU (Glucose-6-phosphate 1-dehydrogenase OS=Borrelia burgdorferi GN=zwf PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.308e-37
Identity = 83/244 (34.02%), Postives = 140/244 (57.38%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            I++ G +G+L++KK  P+LFNL++   + +    + G++R   +D E R  I+  L  +++       +  FL    YV G ++ +E ++ L K           L+ S   ++Y +  P+ Y  +   +KK  +  S+    ++IV+EKPFG  L++++KL++ +   F+E QIYRIDHYLGKE VQN+   RF N +F  +WN   +D VQI   E+ G +GR  Y+D  G ++D++QNH+L
Sbjct:   11 IVIFGVTGNLSRKKLIPSLFNLFKNKCISN--FRVIGFSRKIFTDKEFRLYIKDSLWQEET----DSLIEIFLNFFVYVFGDFNEKESYKNLFK----------FLDRSRETIYYLSTSPAFYGPIINHLKKYFL--SEKLTLSKIVLEKPFGSSLETAKKLNSLLYSAFKEDQIYRIDHYLGKETVQNIFTFRFGNSIFENIWNNRYVDFVQITVAEELGLDGRVEYYDSVGALKDMVQNHIL 236          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_ECOLI (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli (strain K12) GN=zwf PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.673e-35
Identity = 93/249 (37.35%), Postives = 135/249 (54.22%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEG---FQLLDKEISAHESSKNSLEGSSRRLF--YFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA GDLA++K  P+L+ L + G L   +  I G  R           +R  L          E + E         G +DT      F  LD   +A  S   ++     R+   YFA+PPS + ++ + + +  +N        R+V+EKP G  L +S++++ Q+GE FEE Q+YRIDHYLGKE V NLL LRFAN +F+  W+   ID+V+I   E+ G EGR GYFD+ G +RD+IQNHLL
Sbjct:   12 LVIFGAKGDLARRKLLPSLYQLEKAGQLNP-DTRIIGVGRADWDKAAYTKVVREAL-----ETFMKETIDE---------GLWDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKP----ARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDMIQNHLL 241          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_ECOL6 (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli O6 GN=zwf PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.673e-35
Identity = 93/249 (37.35%), Postives = 135/249 (54.22%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEG---FQLLDKEISAHESSKNSLEGSSRRLF--YFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA GDLA++K  P+L+ L + G L   +  I G  R           +R  L          E + E         G +DT      F  LD   +A  S   ++     R+   YFA+PPS + ++ + + +  +N        R+V+EKP G  L +S++++ Q+GE FEE Q+YRIDHYLGKE V NLL LRFAN +F+  W+   ID+V+I   E+ G EGR GYFD+ G +RD+IQNHLL
Sbjct:   12 LVIFGAKGDLARRKLLPSLYQLEKAGQLNP-DTRIIGVGRADWDKAAYTKVVREAL-----ETFMKETIDE---------GLWDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKP----ARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDMIQNHLL 241          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_ECO57 (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli O157:H7 GN=zwf PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.673e-35
Identity = 93/249 (37.35%), Postives = 135/249 (54.22%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEG---FQLLDKEISAHESSKNSLEGSSRRLF--YFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA GDLA++K  P+L+ L + G L   +  I G  R           +R  L          E + E         G +DT      F  LD   +A  S   ++     R+   YFA+PPS + ++ + + +  +N        R+V+EKP G  L +S++++ Q+GE FEE Q+YRIDHYLGKE V NLL LRFAN +F+  W+   ID+V+I   E+ G EGR GYFD+ G +RD+IQNHLL
Sbjct:   12 LVIFGAKGDLARRKLLPSLYQLEKAGQLNP-DTRIIGVGRADWDKAAYTKVVREAL-----ETFMKETIDE---------GLWDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKP----ARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDMIQNHLL 241          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_PSEAE (Glucose-6-phosphate 1-dehydrogenase OS=Pseudomonas aeruginosa GN=zwf PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34
Identity = 89/246 (36.18%), Postives = 135/246 (54.88%), Query Frame = 3
Query:  198 SIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQV-SEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            ++ + GA GDLA +K FPAL+ L R+  L   +  +   AR + +  E    +   L     A    + V   F + + Y+S  +        LD +  A+   + +++     + YFA P SV+  +   +       + L   TR+V+EKP G DL+SS +++  +   F E +IYRIDHYLGKE VQNL+ LRFAN +F   WN+++I +V+I   E  G EGR GYFD+ G +RD++QNHLL
Sbjct:   10 TLALFGALGDLALRKLFPALYQLDRENLLH-RDTRVLALARDEGAPAEHLATLEQRLRLAVPAKEWDDVVWQRFRERLDYLSMDF--------LDPQ--AYVGLREAVDDELPLVAYFATPASVFGGICENLAA-----AGLAERTRVVLEKPIGHDLESSREVNEAVARFFPESRIYRIDHYLGKETVQNLIALRFANSLFETQWNQNHISHVEITVAEKVGIEGRWGYFDQAGQLRDMVQNHLL 239          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_HELPY (Glucose-6-phosphate 1-dehydrogenase OS=Helicobacter pylori GN=zwf PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.162e-32
Identity = 84/245 (34.29%), Postives = 137/245 (55.92%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQ-GFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA+GDLA +K F +L+ +Y   GF   N+  I    R ++S++E        L+ +K+     E+  EFL  I Y+    D  + F+ L K  + ++            +FYF++ PS + + ++ + K  +N ++    TR+++EKP G DL + +++   I   F+E QI+RIDHYLGK+ VQN+L LR  N +   LW  D I  V+I   E  G E RG ++D+ G +RD++QNHLL
Sbjct:    6 LVLFGATGDLAMRKLFVSLYEIYTHYGF--KNDSRIIASGRKELSNEEFLT-----LLCEKTQLHSREKGREFLAHISYLCVRLDNPKDFEELSKIATKNKPL----------IFYFSISPSFFATTAQHLAKNALNHAN----TRLILEKPLGHDLKTCKEIFQSISVFFKEEQIFRIDHYLGKKGVQNILELRLNNPILNILW--DQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLL 227          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_HELPJ (Glucose-6-phosphate 1-dehydrogenase OS=Helicobacter pylori J99 GN=zwf PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.341e-31
Identity = 83/245 (33.88%), Postives = 137/245 (55.92%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLY-RQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA+GDLA +K F +L+ +Y   GF   N+  I    R ++S++E        L+ +K+     E+  EFL  I Y+    D  + F+ L K  + ++            +FYF++ PS + + ++ + +  +N ++    TR+++EKP G DL + +++   I   F+E QI+RIDHYLGK+ VQN+L LR  N +   LW  D I  V+I   E  G E RG ++D+ G +RD++QNHLL
Sbjct:    6 LVLFGATGDLAMRKLFVSLYEIYIHYGF--KNDSRIIASGRKELSNEEFLA-----LLCEKTQLHSREKGEEFLTHISYLRVRLDNPKDFEELSKIATNNKPL----------IFYFSISPSFFATTAQNLAQNALNHAN----TRLILEKPLGHDLKTCKEIFQSISAFFKEEQIFRIDHYLGKKGVQNILELRLNNPILNILW--DQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLL 227          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_ZYMMO (Glucose-6-phosphate 1-dehydrogenase OS=Zymomonas mobilis GN=zwf PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.589e-30
Identity = 82/249 (32.93%), Postives = 134/249 (53.82%), Query Frame = 3
Query:  198 SIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRN----RIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            ++I+ G++GDL+++   P+L+ L   G L ++++ I   +R++   D  R+     +  ++ +D+      +  ++FL  + Y +        F  L       E              Y +  PS++      +K+  +     G  +R+ +EKP G+DL SS+ ++  + ++F E Q+YRIDHYLGKE VQNLL LRF N +F PLWN   ID+VQI   E  G EGR GYFD  G +RD++Q+H+L
Sbjct:    7 TMILFGSTGDLSQRMLLPSLYGLDADGLL-ADDLRIVCTSRSEYDTDGFRDFAEKALDRFVASDRL---NDDAKAKFLNKLFYATVDITDPTQFGKLADLCGPVEKGI---------AIYLSTAPSLFEGAIAGLKQAGL----AGPTSRLALEKPLGQDLASSDHINDAVLKVFSEKQVYRIDHYLGKETVQNLLTLRFGNALFEPLWNSKGIDHVQISVAETVGLEGRIGYFDGSGSLRDMVQSHIL 238          
The following BLAST results are available for this feature:
BLAST of CX047344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
G6PD_CHLPN1.514e-3834.41Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia p... [more]
G6PD_DICD33.729e-3736.48Glucose-6-phosphate 1-dehydrogenase OS=Dickeya dad... [more]
G6PD_BORBU8.308e-3734.02Glucose-6-phosphate 1-dehydrogenase OS=Borrelia bu... [more]
G6PD_ECOLI2.673e-3537.35Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_ECOL62.673e-3537.35Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_ECO572.673e-3537.35Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_PSEAE8.598e-3436.18Glucose-6-phosphate 1-dehydrogenase OS=Pseudomonas... [more]
G6PD_HELPY6.162e-3234.29Glucose-6-phosphate 1-dehydrogenase OS=Helicobacte... [more]
G6PD_HELPJ2.341e-3133.88Glucose-6-phosphate 1-dehydrogenase OS=Helicobacte... [more]
G6PD_ZYMMO2.589e-3032.93Glucose-6-phosphate 1-dehydrogenase OS=Zymomonas m... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_13F02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13F02-K4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047344 ID=CX047344; Name=CX047344; organism=Citrus sinensis; type=EST; length=932bp
AAAATTCAACCTTTTAGGAACATAATACTCGCAATCAAACATCCTTGTTT
TCAACTCCAGCAACAATCTTTCTTCGTTCAGTTTTCAACAGAGAGTAGGA
GATGGGATCAGGTCAATGGATAATGGAGAAAAGGTCAAGTTTGAGGAATG
TTTCATTCTCAAGAGACAATGACAATGTGCCTGAAACTGGATGTCTTTCA
ATTATCGTTCTTGGTGCTTCTGGAGATCTTGCCAAGAAAAAGACTTTTCC
TGCTCTCTTCAATCTTTATCGGCAGGGGTTTTTACAGTCAAATGAAGTTC
ACATATTTGGCTATGCAAGGACTAAGATTTCGGATGATGAGCTGAGAAAT
CGCATTCGTGGATATCTTATCAATGACAAAAGCGCACCGGGACAATCAGA
GCAAGTATCAGAGTTTTTGCAGCTGATTAAATATGTAAGTGGTTCTTATG
ACACCGAGGAGGGCTTTCAATTGCTGGACAAGGAAATTTCTGCACATGAA
TCATCAAAAAACAGTTTGGAAGGATCATCTCGTAGACTCTTTTATTTTGC
ACTTCCACCGTCTGTATATCCATCTGTTTCCAGGATGATTAAGAAGTGCT
GCATGAATAGATCTGATCTTGGTGGCTGGACACGTATTGTTGTTGAGAAG
CCATTTGGCAAGGATTTGGACTCATCTGAGAAACTTAGTGCCCAGATTGG
GGAGTTGTTTGAAGAACCACAAATCTACCGTATTGATCACTATTTGGGAA
AGGAACTGGTGCAAAACTTGTTGGTACTACGCTTTGCAAATCGTATGTTT
TTGCCCCTTTGGAATCGTGACAACATTGACAATGTACAGATTGTCTTCAG
AGAAGATTTTGGAACTGAAGGTCGTGGAGGATATTTTGATGAATATGGGA
TTATCCGTGATATTATTCAAAATCATCTATTA
back to top