CX047344

Overview
NameCX047344
Unique NameCX047344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_BUCBP (Glucose-6-phosphate 1-dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=zwf PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.589e-30
Identity = 80/244 (32.79%), Postives = 128/244 (52.46%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA GDL+ +K  P+L+ L ++  L ++   I G  R         N +   LI   +         +F   +++ +   +    F+ L + I          + ++  + Y A+PP  + ++   ++   +N       TRI++EKP G  L +S  ++ +IG+ F+E QI+RIDHYLGKE +QNLL  RF+N +F   WN   ID+VQI   E  G EGR  YFD  G I+D++QNHLL
Sbjct:   10 LVIFGAKGDLSCRKLLPSLYQLEKKNKLCTH-TRIIGVGRANWDKIIYTNVVYKSLIKFLNETIIESIWKKFSSRLEFCNLDINCLHNFKKLKQIIQ---------QNNNIIINYLAMPPHTFGNICLGLESINLNLEP----TRIIIEKPLGSSLKTSININNKIGKFFKEKQIFRIDHYLGKETIQNLLAFRFSNSLFYYNWNNKFIDHVQITVSETIGVEGRFNYFDTVGQIKDMVQNHLL 239          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD2_MYCTU (Probable glucose-6-phosphate 1-dehydrogenase OS=Mycobacterium tuberculosis GN=zwf2 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.381e-30
Identity = 82/245 (33.47%), Postives = 135/245 (55.10%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVY-PSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ G +GDLA+K TF AL+ L R   L   +  I G A   +S  +L    R  +       G++E++ +   +   ++G      G  + D ++  ++S    +  + R L+Y  +PP+++ P V  +     + R+      R+ VEKPFG DL S+ +L+A++  +  E QI R+DH+LGK+ V  L  LRFAN+    LW+R++I  + I   EDFG E RG ++D  G +RD++QNHLL
Sbjct:   12 LVIFGITGDLARKMTFRALYRLERHQLL---DCPILGVASDDMSVGQLVKWARESI-------GRTEKIDD--AVFDRLAGRLSYLHG-DVTDSQL--YDSLAELIGSACRPLYYLEMPPALFAPIVENLANVRLLERA------RVAVEKPFGHDLASALELNARLRAVLGEDQILRVDHFLGKQPVVELEYLRFANQALAELWDRNSISEIHITMAEDFGVEDRGKFYDAVGALRDVVQNHLL 235          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD2_MYCBO (Probable glucose-6-phosphate 1-dehydrogenase OS=Mycobacterium bovis GN=zwf2 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.381e-30
Identity = 82/245 (33.47%), Postives = 135/245 (55.10%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVY-PSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ G +GDLA+K TF AL+ L R   L   +  I G A   +S  +L    R  +       G++E++ +   +   ++G      G  + D ++  ++S    +  + R L+Y  +PP+++ P V  +     + R+      R+ VEKPFG DL S+ +L+A++  +  E QI R+DH+LGK+ V  L  LRFAN+    LW+R++I  + I   EDFG E RG ++D  G +RD++QNHLL
Sbjct:   12 LVIFGITGDLARKMTFRALYRLERHQLL---DCPILGVASDDMSVGQLVKWARESI-------GRTEKIDD--AVFDRLAGRLSYLHG-DVTDSQL--YDSLAELIGSACRPLYYLEMPPALFAPIVENLANVRLLERA------RVAVEKPFGHDLASALELNARLRAVLGEDQILRVDHFLGKQPVVELEYLRFANQALAELWDRNSISEIHITMAEDFGVEDRGKFYDAVGALRDVVQNHLL 235          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_CULPI (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Culex pipiens GN=ZW PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.738e-29
Identity = 75/165 (45.45%), Postives = 100/165 (60.61%), Query Frame = 3
Query:  255 LFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLG 749
            L+ L+R   L S    + GYARTK++  EL+ +   Y+  D +     E+  EF  L  YV+GSYD    F+LL++EI   E  K     ++ RLFY  LPPSV+ +V+  I+  CM    L GW RI+VEKPFG+D DSS KLS  + +LF E Q+YRIDHYLG
Sbjct:    1 LWWLFRDNLLPSVTKFV-GYARTKLTVAELKEKCHPYMKVDAA---HEEKYDEFWALNFYVAGSYDGRRDFELLNQEIGKFEVGK-----TANRLFYLRLPPSVFETVTVHIRNTCMG---LKGWNRIIVEKPFGRDADSSNKLSEHLAKLFTEDQLYRIDHYLG 153          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_BUCAP (Glucose-6-phosphate 1-dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=zwf PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.088e-28
Identity = 81/248 (32.66%), Postives = 135/248 (54.44%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDE----LRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ G  GDLA++K  PAL+ L +   +   +  I G  R   + ++    ++  I+ +L N+K      +++   L    Y+    D  +    L+ +   ++  KN +      ++Y A+P + + ++   + K  +N       +RI++EKP G  L++S+K++ QI + F E QI+RIDHYLGKE + NLL LRF+N  F   WN   ID++QI   E+ G E R  YFD+ G  RD++QNHLL
Sbjct:   11 LVIFGTKGDLARRKLLPALYKLEKSQKIHP-DTRIIGTGRADWNTEDYIKIVKKAIKMFL-NEKIDEKIWKKLRSRLNFF-YI----DVFQDLHFLELKNILNQK-KNII------IYYCAVPSNTFNAIFTGLGKVNLNSFP----SRIIIEKPLGVSLETSKKINNQIAKYFLESQIFRIDHYLGKESILNLLALRFSNSFFFHSWNNKIIDHIQITVSEEVGIENRWNYFDQMGQTRDMVQNHLL 240          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_CHLTR (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia trachomatis GN=zwf PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.423e-28
Identity = 62/171 (36.26%), Postives = 98/171 (57.31%), Query Frame = 3
Query:  426 IKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGG---WTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHL 929
            I Y   ++   EG+ +L   +   +    +      RLFY + PP  +  + R + +  +   + G    W+R+++EKPFG +L+++ +L   I    +E  +YRIDHYLGKE VQN+L +RFAN +F   WN   ID+VQI   E  G   RG +F++ G++RD++QNHL
Sbjct:   26 IFYHQANFSDAEGYSVLKAYLEQLDQQYGT---QGNRLFYLSTPPDYFQEIIRNLNRHQLFYHEQGAQQPWSRLIIEKPFGVNLETARELQQCIDANIDEESVYRIDHYLGKETVQNILTIRFANTLFESCWNSQYIDHVQISVSESIGIGSRGNFFEKSGMLRDMVQNHL 193          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_SARBU (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Sarcophaga bullata GN=ZW PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.050e-28
Identity = 67/165 (40.61%), Postives = 103/165 (62.42%), Query Frame = 3
Query:  255 LFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLG 749
            L+ LYR   L        GYAR+K++  ++R     ++   K  P + ++  EF +L  YVSGSYD   GF++L +++   E+     +G + R+FY ALPPSV+ SV+  IK+ C+++    GW R+++EKPFG+D  +S++LS  +  LF+E QIYRIDHYLG
Sbjct:    1 LWWLYRDNLLPK-PTKFCGYARSKLTTADIRKACEKFM---KVQPHEQQRYEEFWELNHYVSGSYDGRLGFEMLQQQMEIMEN-----KGVANRVFYLALPPSVFNSVTVRIKEICLSKK---GWNRVIIEKPFGRDDVTSKQLSDHLASLFDEEQIYRIDHYLG 153          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_BUCAI (Glucose-6-phosphate 1-dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=zwf PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.586e-25
Identity = 83/260 (31.92%), Postives = 131/260 (50.38%), Query Frame = 3
Query:  201 IIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSE-QVSEFLQLIKYVSGSYDTEEGFQLLDKEISA---------HE-----SSKNSLEGSSRRLFYF-ALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHLL 932
            +++ GA GDL K+K  PAL+ L +     S ++H +    T+I                  A G+++    ++++ IK    ++  EE   L+ K +S+         HE       K  L+     + Y+ A+P +   S+   +    +N       +RIV+EKP G  L +S+K++ QI + F E QI+RIDHYLGKE + NL  LRF+N      WN   ID++QI   E+ G E R  YF+  G ++D++QNHLL
Sbjct:   11 LVIFGAKGDLTKRKLLPALYKLEK-----SKKIHKY----TRI-----------------IASGRADWSTEDYIEKIKTEVKNFLNEEINDLIWKNLSSRIFFCNIDVHEPLHFFRLKTILKQKKNIIVYYCAVPSNTLNSIFIGLGNAHLNSVP----SRIVLEKPLGVCLKTSKKINDQISKYFLESQIFRIDHYLGKESILNLFALRFSNTCLFYNWNNKTIDHIQITVSEEVGIEDRWNYFNMMGQMKDMVQNHLL 240          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_DROSI (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Drosophila simulans GN=Zw PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.295e-25
Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = 3
Query:  255 LFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLG 749
            L+ LYR   L        GYAR+ ++ + L+ +   Y+   K  P +  +  EF  L  YVSG YD    F++L++ +   E+     +  + R+FY ALPPSV+  V+  IK+ CM+   L GW R+++EKPFG+D  SS+ LS  +  LF E Q+YRIDHYLG
Sbjct:    1 LWWLYRDDLLPK-PTKFCGYARSMLTTETLKEQCLPYM---KVQPHEQNKYEEFWALNDYVSGRYDGRTSFEVLNQRLEMMEN-----KNKANRIFYLALPPSVFEEVTVNIKQVCMS---LCGWNRVIIEKPFGRDDASSQALSDHLAGLFNEDQLYRIDHYLG 153          
BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_HYACE (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Hyalophora cecropia GN=ZW PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.066e-24
Identity = 62/165 (37.58%), Postives = 98/165 (59.39%), Query Frame = 3
Query:  255 LFNLYRQGFLQSNEVHIFGYARTKISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLG 749
            ++ L+R   L  N   I GYARTK +  E++ + + Y+   K   G+ +++ EF     Y+SGSYD    ++ L++ IS +E         + R+FY A+PP+V+   +  I+  C   + + G+TR+++EKPFG+D  SS+ LS  +  LF+E QIYRIDHYLG
Sbjct:    1 IWYLFRDNLLPRNTKFI-GYARTKQTLAEVKEKCKKYI---KVRTGEEDKLEEFWAANDYLSGSYDKRVDYEFLNQVISKYEKGP-----IANRIFYLAVPPTVFEDATLNIRNAC---TSIKGFTRVIIEKPFGRDDKSSDILSKDLAGLFKEEQIYRIDHYLG 153          
The following BLAST results are available for this feature:
BLAST of CX047344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
G6PD_BUCBP2.589e-3032.79Glucose-6-phosphate 1-dehydrogenase OS=Buchnera ap... [more]
G6PD2_MYCTU3.381e-3033.47Probable glucose-6-phosphate 1-dehydrogenase OS=My... [more]
G6PD2_MYCBO3.381e-3033.47Probable glucose-6-phosphate 1-dehydrogenase OS=My... [more]
G6PD_CULPI3.738e-2945.45Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD_BUCAP1.088e-2832.66Glucose-6-phosphate 1-dehydrogenase OS=Buchnera ap... [more]
G6PD_CHLTR2.423e-2836.26Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia t... [more]
G6PD_SARBU7.050e-2840.61Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD_BUCAI5.586e-2531.92Glucose-6-phosphate 1-dehydrogenase OS=Buchnera ap... [more]
G6PD_DROSI7.295e-2539.39Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD_HYACE8.066e-2437.58Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13F02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13F02-K4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047344 ID=CX047344; Name=CX047344; organism=Citrus sinensis; type=EST; length=932bp
AAAATTCAACCTTTTAGGAACATAATACTCGCAATCAAACATCCTTGTTT
TCAACTCCAGCAACAATCTTTCTTCGTTCAGTTTTCAACAGAGAGTAGGA
GATGGGATCAGGTCAATGGATAATGGAGAAAAGGTCAAGTTTGAGGAATG
TTTCATTCTCAAGAGACAATGACAATGTGCCTGAAACTGGATGTCTTTCA
ATTATCGTTCTTGGTGCTTCTGGAGATCTTGCCAAGAAAAAGACTTTTCC
TGCTCTCTTCAATCTTTATCGGCAGGGGTTTTTACAGTCAAATGAAGTTC
ACATATTTGGCTATGCAAGGACTAAGATTTCGGATGATGAGCTGAGAAAT
CGCATTCGTGGATATCTTATCAATGACAAAAGCGCACCGGGACAATCAGA
GCAAGTATCAGAGTTTTTGCAGCTGATTAAATATGTAAGTGGTTCTTATG
ACACCGAGGAGGGCTTTCAATTGCTGGACAAGGAAATTTCTGCACATGAA
TCATCAAAAAACAGTTTGGAAGGATCATCTCGTAGACTCTTTTATTTTGC
ACTTCCACCGTCTGTATATCCATCTGTTTCCAGGATGATTAAGAAGTGCT
GCATGAATAGATCTGATCTTGGTGGCTGGACACGTATTGTTGTTGAGAAG
CCATTTGGCAAGGATTTGGACTCATCTGAGAAACTTAGTGCCCAGATTGG
GGAGTTGTTTGAAGAACCACAAATCTACCGTATTGATCACTATTTGGGAA
AGGAACTGGTGCAAAACTTGTTGGTACTACGCTTTGCAAATCGTATGTTT
TTGCCCCTTTGGAATCGTGACAACATTGACAATGTACAGATTGTCTTCAG
AGAAGATTTTGGAACTGAAGGTCGTGGAGGATATTTTGATGAATATGGGA
TTATCCGTGATATTATTCAAAATCATCTATTA
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