CX047344

Overview
NameCX047344
Unique NameCX047344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX047344 vs. ExPASy Swiss-Prot
Match: G6PD_ENCCU (Glucose-6-phosphate 1-dehydrogenase OS=Encephalitozoon cuniculi GN=ZWF1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.064e-18
Identity = 75/247 (30.36%), Postives = 114/247 (46.15%), Query Frame = 3 
Query:  195 LSIIVLGASGDLAKKKTFPALFNLYRQGFLQSNEVHIFGYARTK--ISDDELRNRIRGYLINDKSAPGQSEQVSEFLQLIKYVSGSYDTEEGFQLLDKEISAHESSKNSLEGSSRRLFYFALPPSVYPSVSRMIKKCCMNRSDLGGWTRIVVEKPFGKDLDSSEKLSAQIGELFEEPQIYRIDHYLGKELVQNLLVLRFANRMFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDEYGIIRDIIQNHL 929
            + +++ G+SGDLAK+K FPAL  +  +G      V + GYARTK  I   E+   +  Y               EFL  + Y+ G YD               + SK      S  + YF++P SVY  + R I K          +  I VEKP+G  ++S  ++       F+  +   IDHYL K LV  +  +         + +   + +V+IV +E  G EGR  YFD+ GIIRD++ +H+
Sbjct:    1 MKVVIFGSSGDLAKRKLFPALSRIDLEG------VGVVGYARTKYNIEFSEVLQEVGNY-------------SPEFLSKVTYIPGPYD---------------DLSKLKEVSDSETVLYFSVPSSVYTCLFREISKL--------DYKVIGVEKPYGDSIESFMEIKG-----FDLGKTRFIDHYLLKPLVVAMPGIIRETGAIREVMSNRYVKSVEIVSKEVLGGEGR-HYFDKNGIIRDMVLSHM 199
The following BLAST results are available for this feature:
BLAST of CX047344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
G6PD_ENCCU5.064e-1830.36Glucose-6-phosphate 1-dehydrogenase OS=Encephalito... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13F02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13F02-K4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047344 ID=CX047344; Name=CX047344; organism=Citrus sinensis; type=EST; length=932bp
AAAATTCAACCTTTTAGGAACATAATACTCGCAATCAAACATCCTTGTTT
TCAACTCCAGCAACAATCTTTCTTCGTTCAGTTTTCAACAGAGAGTAGGA
GATGGGATCAGGTCAATGGATAATGGAGAAAAGGTCAAGTTTGAGGAATG
TTTCATTCTCAAGAGACAATGACAATGTGCCTGAAACTGGATGTCTTTCA
ATTATCGTTCTTGGTGCTTCTGGAGATCTTGCCAAGAAAAAGACTTTTCC
TGCTCTCTTCAATCTTTATCGGCAGGGGTTTTTACAGTCAAATGAAGTTC
ACATATTTGGCTATGCAAGGACTAAGATTTCGGATGATGAGCTGAGAAAT
CGCATTCGTGGATATCTTATCAATGACAAAAGCGCACCGGGACAATCAGA
GCAAGTATCAGAGTTTTTGCAGCTGATTAAATATGTAAGTGGTTCTTATG
ACACCGAGGAGGGCTTTCAATTGCTGGACAAGGAAATTTCTGCACATGAA
TCATCAAAAAACAGTTTGGAAGGATCATCTCGTAGACTCTTTTATTTTGC
ACTTCCACCGTCTGTATATCCATCTGTTTCCAGGATGATTAAGAAGTGCT
GCATGAATAGATCTGATCTTGGTGGCTGGACACGTATTGTTGTTGAGAAG
CCATTTGGCAAGGATTTGGACTCATCTGAGAAACTTAGTGCCCAGATTGG
GGAGTTGTTTGAAGAACCACAAATCTACCGTATTGATCACTATTTGGGAA
AGGAACTGGTGCAAAACTTGTTGGTACTACGCTTTGCAAATCGTATGTTT
TTGCCCCTTTGGAATCGTGACAACATTGACAATGTACAGATTGTCTTCAG
AGAAGATTTTGGAACTGAAGGTCGTGGAGGATATTTTGATGAATATGGGA
TTATCCGTGATATTATTCAAAATCATCTATTA
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