FC921966

Overview
NameFC921966
Unique NameFC921966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length356
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.502e-22
Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KF DENF  KHTGPG+LSMAN+G ++NG QFFI   K  WLDN+HVVFG VL +G+ VV  +ENV T   ++P    TIA  GE+
Sbjct:  124 SIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVL-EGMDVVYAMENVKTSRGDKPVEPITIAASGEL 212          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.267e-22
Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            S+YG  F DENF   H GPG+LSMAN+GPN+NG QFFI   K  WLD +HVVFG+V+ +G+ VV+ IE   T   +RP+    IA+CG++
Sbjct:  166 SVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVI-EGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.267e-22
Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KF+DENF+ KHTGPG LSMAN+G N+NG QFFI   K  WLD KHVVFG+V+  G+ VVR++E   +  + +P     I +CGE+
Sbjct:  228 SIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVV-SGMNVVREMERCGSA-SGKPSKRVVIVDCGEL 315          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.267e-22
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG +F DENF  +H G G LSMAN+GP++NG QFFIT  K  WLD KHVVFG+V+ +G+ +VR+IE+  T   +RP  +  IA CG +
Sbjct:  110 SIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVV-EGMNIVRQIESETTDSRDRPVKSIKIASCGHI 198          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.267e-22
Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KF DENFI KHT PGLLSMAN+GP +NG QFFIT      LD KHVVFG+V+ +G+ VVRKIE   T   ++P     IA+CG++
Sbjct:   81 SIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVV-EGMDVVRKIEATQTDRGDKPLSEVKIAKCGQL 169          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.573e-22
Identity = 55/92 (59.78%), Postives = 66/92 (71.74%), Query Frame = 3
Query:    6 IYGHK-FDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNR--PKLACTIAECGEM 272
            IYG K F DENF+ KH  PGLLSMAN+GPN+NG QFFIT     +LD KHVVFG+V+ DG+ VV+K+EN  TG   +  P L   IA+CGEM
Sbjct:   92 IYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVV-DGMDVVKKMENTKTGYRGKDVPNLDVVIAQCGEM 182          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.279e-22
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KF DENF+ +H  PGLLSMAN+GPN+NG QFFIT   C WLD KHVVFG V  DGL +V+KIE+  +G     K    I E G++
Sbjct:   75 SIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVT-DGLDIVKKIESFGSGSGATSK-KIVIEESGQL 162          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.507e-22
Identity = 53/90 (58.89%), Postives = 62/90 (68.89%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG+KFDDE F  KH  P LLSMAN+GPN+NG QFFIT      LD KHVVFG VL +G  VVR+IEN+ T   +RP     I +CGE+
Sbjct:   91 SIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVL-NGKSVVRQIENLTTQSGDRPAKEALIVDCGEL 179          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.507e-22
Identity = 53/90 (58.89%), Postives = 58/90 (64.44%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SI+G+ F DENF  KH  PG LSMAN G N+NG QFFIT   C WLD KHVVFG VL DG+ VV  IENV T   N P     I E GE+
Sbjct:  108 SIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVL-DGMDVVHYIENVKTDSRNMPVKEVIIVESGEL 196          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.242e-21
Identity = 50/90 (55.56%), Postives = 63/90 (70.00%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG +F DENF  KH GPG+LSMAN+GPN+NG QFFI   K DWLD KHVVFG V  +G+ VV+KIE+  +  + R      I +CG++
Sbjct:  119 SIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHV-KEGMDVVKKIESFGS-KSGRTSKKIVITDCGQL 206          
The following BLAST results are available for this feature:
BLAST of FC921966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PPIB_CRYNE2.502e-2258.89Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
CP20B_ARATH3.267e-2253.33Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIE_RHIOR4.267e-2255.56Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIB_SCHMA4.267e-2254.44Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CYPX_USEUD4.267e-2258.89Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
PPIH_NEUCR5.573e-2259.78Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPIA_CANAL7.279e-2257.78Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPID_GIBZE9.507e-2258.89Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
CYPD_YEAST9.507e-2258.89Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
PPIF_HUMAN1.242e-2155.56Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]

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Properties
Property NameValue
Genbank descriptionC06056A07T7 RindPdigS Citrus sinensis cDNA clone C06056A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921966 ID=FC921966; Name=FC921966; organism=Citrus sinensis; type=EST; length=356bp
CTTCAATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACAC
ACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACCAAATTCTAATGG
GTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGCTTGACAATAAGC
ACGTTGTATTTGGGAGGGTGCTCGGAGATGGTCTTTTGGTTGTCAGGAAG
ATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAAACTGGCATGCAC
TATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTGAAAACAATTGTG
GCATTTCTAAGGACTAATAAAAAGAAAATATCTGTTAACAAGTAGAATTG
TATATT
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