FC921966

Overview
NameFC921966
Unique NameFC921966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length356
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.162e-21
Identity = 51/90 (56.67%), Postives = 61/90 (67.78%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KF DENF  KH G G LSMAN+G ++NG QFFIT  K  WLD +HVVFG++L +G+ VVRKIE     P +RPK    IA  G +
Sbjct:  102 SIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKIL-EGMDVVRKIEQTEKLPGDRPKQDVIIAASGHI 190          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.048e-21
Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG  F DENF  KH G G +SMAN+GP++NG QFFIT  K  WLD KHVVFG+V+ DG+ VV  IE  AT  ++RP   C+I   G++
Sbjct:  111 SIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVI-DGMTVVHSIELQATDGHDRPLTNCSIINSGKI 199          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.048e-21
Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG +F DENF  KH GPG +SMAN+G ++NG QFFIT  K  WLD KHVVFG+VL +G+ VVRK+E+  T   ++P     I + G++
Sbjct:  117 SIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVL-EGMDVVRKVESTKTDSRDKPLKDVIIVDSGKI 205          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.048e-21
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGE 269
            SIYG KFDDEN I KHTG G+LSMAN+GPN+NG QFFI  AK +WLD KHV FG+V  + + +V  +E+     N++     TIA+CG+
Sbjct:   77 SIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKV-KERVNIVEAMEHFGY-RNSKTSKKITIADCGQ 163          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.051e-20
Identity = 52/90 (57.78%), Postives = 61/90 (67.78%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KFDDENF  KH   G+LSMANSGPN+NG QFFIT  +   LD KHVVFGRV   G+ VVR IE+V+    + P     I +CGE+
Sbjct:   85 SIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVT-KGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.373e-20
Identity = 53/90 (58.89%), Postives = 62/90 (68.89%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KFDDENF  KHTGPGLLSMAN G N+N  QFFIT  K + LD KHVVFG V  DG+  VRKIE+  +   +  +  C I ECG++
Sbjct: 2966 SIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFV-KDGMDTVRKIESFGSPKGSVSRRIC-ITECGQL 3053          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.373e-20
Identity = 52/90 (57.78%), Postives = 63/90 (70.00%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KF+DENF+ KH  P LLSMAN+GP +NG QFFIT      LD KHVVFG+VL  G  VVR +EN+ T  ++RP     IA+CGE+
Sbjct:   84 SIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVL-KGKAVVRALENLET-VSDRPVEDAVIAKCGEL 171          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.793e-20
Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 3
Query:    6 IYGHK-FDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNR--PKLACTIAECGEM 272
            I+G K F+DENF  KH  PGLLSMAN+GPN+NG QFFIT     +LDNKHVVFG+V  +G+ VV+K+E   TG   +  P L   I++CGEM
Sbjct:   92 IWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVF-EGMDVVKKMEATKTGYRGKDMPNLDVVISQCGEM 182          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.793e-20
Identity = 49/90 (54.44%), Postives = 61/90 (67.78%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG KF DENF  +HT  GLLSMAN+G ++NG QFFIT     WLD +HVVFG VL +G  VV +IENV  GP ++P     I + G++
Sbjct:  109 SIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVL-EGYEVVEQIENVPKGPGDKPAETVKIVKSGQI 197          
BLAST of FC921966 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.342e-20
Identity = 50/90 (55.56%), Postives = 63/90 (70.00%), Query Frame = 3
Query:    3 SIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 272
            SIYG+KF+DENF  +HT  G+LSMAN+G ++NG QFFIT A   WLD KHVVFG VL +G  +V KI+ V  G  +RP     I +CGE+
Sbjct:  108 SIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVL-EGYDIVDKIQVVPKGFQDRPTKDVKIVKCGEL 196          
The following BLAST results are available for this feature:
BLAST of FC921966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CYP5_CAEEL6.162e-2156.67Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIC_HUMAN8.048e-2155.56Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIB_MOUSE8.048e-2153.33Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PAL4A_HUMAN8.048e-2155.06Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
CYP40_ARATH1.051e-2057.78Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
RBP2_MOUSE1.373e-2058.89E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPID_RHIOR1.373e-2057.78Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPIH_GIBZE1.793e-2056.52Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIB_ASPFU1.793e-2054.44Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ARTBE2.342e-2055.56Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]

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Properties
Property NameValue
Genbank descriptionC06056A07T7 RindPdigS Citrus sinensis cDNA clone C06056A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921966 ID=FC921966; Name=FC921966; organism=Citrus sinensis; type=EST; length=356bp
CTTCAATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACAC
ACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACCAAATTCTAATGG
GTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGCTTGACAATAAGC
ACGTTGTATTTGGGAGGGTGCTCGGAGATGGTCTTTTGGTTGTCAGGAAG
ATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAAACTGGCATGCAC
TATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTGAAAACAATTGTG
GCATTTCTAAGGACTAATAAAAAGAAAATATCTGTTAACAAGTAGAATTG
TATATT
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