CX047226

Overview
NameCX047226
Unique NameCX047226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_DROPS (Translationally-controlled tumor protein homolog OS=Drosophila pseudoobscura pseudoobscura GN=Tctp PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.314e-12
Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 461
            D++  K +++ +++EV GK + +   ++ + GAN S                 VD+V   RL E  AF DKK +  Y+K ++K +  KL+E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   16 DTYKIKLVDD-VVYEVYGKLISREGSEIKLEGANASAEEADEGTDTNVESG--VDVVLNHRLVECFAFGDKKSYTLYLKDYMKKVLAKLAEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREIDGQSIPVLMFFKHGLEEEKC 172          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_CANAL (Translationally-controlled tumor protein homolog OS=Candida albicans GN=TMA19 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12
Identity = 51/155 (32.90%), Postives = 75/155 (48.39%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 458
            D++  K ++ G ++E +   V  G  D+DIGANPS                V ++V +FRLQ    FDKK F TY+K ++K +   L+E   +  E F+K      K +L    D +F+ GESM  D  +V   Y+E  T P        +KE K
Sbjct:   16 DAYDVKLVD-GAVYEADCAMVTVGNGDIDIGANPSAEDGEEALEDGAET--VNNVVYSFRLQPT-MFDKKSFTTYIKGYMKRIKAYLAENDPDSVEAFEKGATAYVKKVLGSFKDWEFYTGESMDPDAMVVLLNYREDGTTPYVAIWKHGVKENK 166          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_ASPOR (Translationally-controlled tumor protein homolog OS=Aspergillus oryzae GN=AO090005000996 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 47/158 (29.75%), Postives = 76/158 (48.10%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQ-----EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 458
            D+F  KE++N ILWEV+ + +  G  ++ + GANPS               +V+DI   FRL + P  +K  +   +K ++K +  KL E++      + FK+N + A K +L+   D    VGES   D   +   Y+E    P   +    L+E K
Sbjct:   16 DAFNLKEVDN-ILWEVDCRNITIGDENIQLEGANPSAEGEDDDAGGAGNAEQVLDIKHNFRLNDYPKLEKDEYKKAIKGYMKKVLAKLEEKKAPEETIKEFKENAQTALKRILANYKDYDVLVGESFGADAMHILINYREDGVTPYATFWKHGLEEYK 172          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_PLAF7 (Translationally-controlled tumor protein homolog OS=Plasmodium falciparum (isolate 3D7) GN=TCTP PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12
Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  156 VVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 458
            V+DIVD+F+L    AF KK +  Y+K +++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  ++++YYK     P F+Y++D L E K
Sbjct:   68 VIDIVDSFQLTST-AFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPFIKHILTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_THEPA (Translationally-controlled tumor protein homolog OS=Theileria parva GN=TCTP PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 46/144 (31.94%), Postives = 71/144 (49.31%), Query Frame = 3
Query:   30 NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKE 452
            + + +EV+   V +G  D  IG N                  VVD+VD F LQ   +  KK + +Y++++I+ L   L E   ER E FK  +    K +L+   D +F+VGES+  +  LV+AYYK     P  +++ D L E
Sbjct:   30 SSVAFEVKTSKVPKGEEDYGIGYNDEEGADQMNVDPNVEM--VVDVVDKFGLQSL-SLTKKDYSSYIRKYIQRLVATLQEKNPERVEPFKTTVSDFVKHVLANFEDFEFYVGESLDYEAGLVYAYYKGEEVSPRLVFLKDGLVE 170          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_PLACH (Translationally-controlled tumor protein homolog OS=Plasmodium chabaudi GN=TCTP PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  156 VVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 458
            V+DIVD+F+L    +  KK +  Y+K F++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+Y++D L E K
Sbjct:   68 VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVEIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_LONON (Translationally-controlled tumor protein homolog OS=Lonomia obliqua GN=Tctp PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 458
            D++  K ++  +++EV GK V   QG + +D G NPS                 VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ +IFK N+    K +L++  +LQFF GESM  DG +    Y+  +    P  ++    L+E K
Sbjct:   16 DTYKVKLVDE-VIYEVTGKLVSRTQGDIQID-GFNPSAEEADEGTDSNVETG--VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKELQFFTGESMDCDGMVAMMEYRKVDETEIPIMMFFKHGLEEEK 171          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_PLAYO (Translationally-controlled tumor protein homolog OS=Plasmodium yoelii yoelii GN=TCTP PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.897e-11
Identity = 36/104 (34.62%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  156 VVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 458
            V+DIVD+F+L    +  KK +  Y+K F++ +   L E   +R +IFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+Y++D L E K
Sbjct:   68 VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVDIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_PLAKN (Translationally-controlled tumor protein homolog OS=Plasmodium knowlesi GN=TCTP PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11
Identity = 35/105 (33.33%), Postives = 61/105 (58.10%), Query Frame = 3
Query:  153 KVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 458
            +V+DIVD+F+L    +  KK +  Y+K +++ +   L E   +R ++FK   +   K +L+   D +F++GES+  D  L ++YYK     P F+Y++D L E K
Sbjct:   67 QVIDIVDSFQLTST-SLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_PLABA (Translationally-controlled tumor protein homolog OS=Plasmodium berghei (strain Anka) GN=TCTP PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 36/104 (34.62%), Postives = 60/104 (57.69%), Query Frame = 3
Query:  156 VVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 458
            V+DIVD+F+L    +  KK +  Y+K F++ +   L E   +R  IFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+Y++D L E K
Sbjct:   68 VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVNIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
The following BLAST results are available for this feature:
BLAST of CX047226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TCTP_DROPS1.314e-1231.88Translationally-controlled tumor protein homolog O... [more]
TCTP_CANAL1.716e-1232.90Translationally-controlled tumor protein homolog O... [more]
TCTP_ASPOR2.927e-1229.75Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAF74.993e-1235.58Translationally-controlled tumor protein homolog O... [more]
TCTP_THEPA6.521e-1231.94Translationally-controlled tumor protein homolog O... [more]
TCTP_PLACH8.516e-1235.58Translationally-controlled tumor protein homolog O... [more]
TCTP_LONON8.516e-1233.75Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAYO1.897e-1134.62Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAKN2.478e-1133.33Translationally-controlled tumor protein homolog O... [more]
TCTP_PLABA3.236e-1134.62Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12H06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12H06-O11-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047226 ID=CX047226; Name=CX047226; organism=Citrus sinensis; type=EST; length=646bp
CCGATTCTTTTCCCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGTT
GAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAA
TCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCG
TGAAGGTGGTTGACATTGTCGACACATTCAGGCTACAGGAGCAACCCGCT
TTTGACAAGAAGCCGTTTTTAACATACATGAAGAGATTCATCAAGTTGCT
GACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTG
AGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTT
GTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAA
GGAAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTGAAGG
AGGTGAAGTGCTAAGCTGGGCTTCGAAGAGGAAGTGCCTGCTGTAGTTCT
AATTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGCTGGTTT
ACTCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTTTGACATAAACAA
TATGTTTTTCTGCTCTTAATTATTGGGTTTTATGGTTTGAGATTGA
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