EY735629

Overview
NameEY735629
Unique NameEY735629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.497e-34
Identity = 73/143 (51.05%), Postives = 88/143 (61.54%), Query Frame = 2
Query:   62 GKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKP 490
            GK+KIGINGFGRIG LV R  + R D+E+VA+NDPFI  +YM YMFKYDSVH  W  H    KD    L   + +  F   +P +I W   GA+ V+ESTGVFT               VII+APS DAPMYV+GVN  +Y P
Sbjct:    3 GKIKIGINGFGRIGRLVMRATMLRPDIEVVAINDPFIDAEYMAYMFKYDSVHKTWPGHVNGSKDG--FLVEGRKIHTFTESDPSKINWGAAGADIVIESTGVFTDIAKATAHLTGGAKKVIITAPSNDAPMYVMGVNHEKYNP 143          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.874e-34
Identity = 74/143 (51.75%), Postives = 93/143 (65.03%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+GINGFGRIG +V R  ++ +DV++VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K +     ++P  IPW+ETGA YVVESTGVFT               V+ISAPS DAPM+V+GVN   YKP++
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVDIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSPDAPMFVMGVNHETYKPDI 143          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 7.671e-34
Identity = 76/142 (53.52%), Postives = 94/142 (66.20%), Query Frame = 2
Query:   71 KIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            KIGINGFGRIG LV R  L+    ++VAVNDPFI  +YM YMFKYDS HG +K  E+K +D   ++ G+K +TVF    PE IPW++ GAEY+VESTGVFT               VIISAPS DAPM+V GVN  +Y  ++
Sbjct:    2 KIGINGFGRIGRLVLRAALEMG-AQVVAVNDPFIALEYMVYMFKYDSTHGMFKG-EVKAEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKYSKDM 140          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.002e-33
Identity = 75/143 (52.45%), Postives = 95/143 (66.43%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+GINGFGRIG +V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K  D+   + G K V  +  R+P  IPWAETGA+YV+ESTGVFT               VIISAPS DAPM+V+GVN   YK ++
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFKG-DVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSDI 143          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.002e-33
Identity = 75/145 (51.72%), Postives = 93/145 (64.14%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP---VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            M K K+GINGFGRIG LV R  +++D V++VAVNDPFI  DYM YMFKYDS HG++K   +  +  K ++   K    ++V   ++P EIPW   GAEYVVESTGVFT               VIISAPS DAPM+V+GVN   Y
Sbjct:    1 MSKPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFINIDYMVYMFKYDSTHGRFK-GSVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMY 144          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.309e-33
Identity = 73/142 (51.41%), Postives = 93/142 (65.49%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPE 493
            V +GINGFGRIG +V R  L    +++VA+NDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KPV V+G +NP +I W   G +YVVESTGVFT               VIISAPS DAPM+V+G N  +Y P+
Sbjct:    2 VNVGINGFGRIGRIVFRNALLNPKIQVVAINDPFINLEYMVYMFKYDSVHGRFK-GTVEAKDGKLWIQG-KPVIVYGEKNPSDIKWGAAGRDYVVESTGVFTTVEKAEGHLKGGAKKVIISAPSADAPMFVMGCNLDQYDPK 141          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.309e-33
Identity = 75/142 (52.82%), Postives = 88/142 (61.97%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            M  +K+GINGFGRIG +V R  ++  DVE+VAVNDPFI T Y  YM KYDS HG +       +D   L+   K V  +  R+P  IPW ETGA+YVVESTGVFT               VIISAPS DAPMYV+GVNE  Y
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIETKYAAYMLKYDSTHGIFNGEI--AQDGNDLVINGKKVKFYTERDPAVIPWKETGADYVVESTGVFTTIDKAKAHLQGGAKKVIISAPSADAPMYVMGVNEKSY 140          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.709e-33
Identity = 74/142 (52.11%), Postives = 94/142 (66.20%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPE 493
            V +GINGFGRIG +V R  L+   V++VA+NDPFI  DYM YMFKYDSVHG++K   ++ KD K ++ G KP+ +F  ++P  IPW   GA+YVVESTGVFT               V+ISAPS DAPM+V GVN   Y P+
Sbjct:    2 VNVGINGFGRIGRIVFRNALEVGGVDVVAINDPFIDLDYMVYMFKYDSVHGRFK-GSIEAKDGKLIVEG-KPIHIFAEKDPANIPWGSVGADYVVESTGVFT-TIDKASAHLKGGEKVVISAPSADAPMFVCGVNLETYDPK 140          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.709e-33
Identity = 75/143 (52.45%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+GINGFGRIG +V R  ++ +DVE+VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K V     ++P  IPW+ETGA YVVESTGVFT               V+ISAPS DAPM+V+GVN   YK ++
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFVMGVNHETYKSDI 143          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.709e-33
Identity = 73/143 (51.05%), Postives = 94/143 (65.73%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+G+NGFGRIG LV R       VE+VA+NDPFI  +YM YMF+YDS HG++K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPM+V+GVN+ +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFTSGKVEVVAINDPFIDLNYMVYMFQYDSTHGKFK-GTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNQDKYDNSL 142          
The following BLAST results are available for this feature:
BLAST of EY735629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 293
Match NameE-valueIdentityDescription
G3PC_CHLRE4.497e-3451.05Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_COCHE5.874e-3451.75Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_PANVR7.671e-3453.52Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_COCIM1.002e-3352.45Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_BRUMA1.002e-3351.72Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P_LYOSH1.309e-3351.41Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]
G3P_COLLN1.309e-3352.82Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_PLESA1.709e-3352.11Glyceraldehyde-3-phosphate dehydrogenase OS=Pleuro... [more]
G3P_CURLU1.709e-3352.45Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3P_CRIGR1.709e-3351.05Glyceraldehyde-3-phosphate dehydrogenase OS=Cricet... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-A04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735629 ID=EY735629; Name=EY735629; organism=Citrus sinensis; type=EST; length=497bp
CACGCGTCCGAACTTTCTTCACCACTCTTTCACCGCTCAATTTCATCTCT
CGAGAATCATGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATT
GGTACGCTGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGT
TGCTGTTAATGATCCCTTTATCACAACCGATTACATGACATACATGTTTA
AGTACGACAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAG
GACGATAAGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGT
TAGGAACCCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTG
TGGAGTCGACTGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTG
AAGGGTGGTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCC
TATGTATGTTGTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTCA
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