EY735629

Overview
NameEY735629
Unique NameEY735629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 3.807e-33
Identity = 71/143 (49.65%), Postives = 93/143 (65.03%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+G+NGFGRIG LV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G K +++F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPM+V+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_XENLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Xenopus laevis GN=gapdh PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 4.972e-33
Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+GINGFG IG LV R       V++VA+NDPFI  DYM YMFKYDS HG++K   +K ++ K L+  ++ +TVF  R+P  I W + GA YVVESTGVFT               V+ISAPS DAPM+VVGVN  +Y+  L
Sbjct:    2 VKVGINGFGCIGRLVTRAAFDSGKVQVVAINDPFIDLDYMVYMFKYDSTHGRFK-GTVKAENGK-LIINDQVITVFQERDPSSIKWGDAGAVYVVESTGVFTTTEKASLHLKGGAKRVVISAPSADAPMFVVGVNHEKYENSL 142          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 4.972e-33
Identity = 72/143 (50.35%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+G+NGFGRIG LV R  +    V++VA+NDPFI  +YM YMFKYDS HG +K   +K ++ K ++ G   +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPM+V+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFK-GTVKAENGKLVING-NAITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDKSL 142          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P3_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis briggsae GN=gpd-3 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.972e-33
Identity = 75/149 (50.34%), Postives = 94/149 (63.09%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWK---HHE----LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            M K  +GINGFGRIG LV R  +++D V +VAVNDPFI+ DYM Y+F+YDS HG++K    HE    L  K+ K+    +  + V+  R+P EI W   GA+YVVESTGVFT               VIISAPS DAPM+VVGVN  +Y
Sbjct:    1 MSKPSVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQWGSAGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 6.494e-33
Identity = 75/139 (53.96%), Postives = 87/139 (62.59%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            VK+GINGFGRIG +V R   +  DVE+VAVNDPFI   Y  YM KYDS HG +K        D  L+ G K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAPS DAPMYV+GVNE  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAHEHSDVEIVAVNDPFIEPHYAAYMLKYDSQHGNFKGDVTVEGSD--LVVGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMYVMGVNEKTY 139          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 8.481e-33
Identity = 72/143 (50.35%), Postives = 94/143 (65.73%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+GINGFGRIG +V R  ++ +DVE+VAVNDPFI   Y  YM KYDS HGQ+K  ++KV+ +   + G K +  +  ++P  IPW+ETGA YVVESTGVFT               V+ISAPS DAPM+V+GVN   Y  ++
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSQHGQFK-GDIKVEGNDLTING-KTIRFYTEKDPANIPWSETGAYYVVESTGVFTTTDKAKAHLKGGAKKVVISAPSADAPMFVMGVNNETYTKDI 143          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P3_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis elegans GN=gpd-3 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 8.481e-33
Identity = 75/149 (50.34%), Postives = 95/149 (63.76%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWK---HHE----LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            M K  +GINGFGRIG LV R  +++D V +VAVNDPFI+ DYM Y+F+YDS HG++K    HE    L  K+ K+    +  + V+  R+P EI W  +GA+YVVESTGVFT               VIISAPS DAPM+VVGVN  +Y
Sbjct:    1 MTKPSVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P2_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis elegans GN=gpd-2 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 8.481e-33
Identity = 75/149 (50.34%), Postives = 95/149 (63.76%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWK---HHE----LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            M K  +GINGFGRIG LV R  +++D V +VAVNDPFI+ DYM Y+F+YDS HG++K    HE    L  K+ K+    +  + V+  R+P EI W  +GA+YVVESTGVFT               VIISAPS DAPM+VVGVN  +Y
Sbjct:    1 MPKPSVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 8.481e-33
Identity = 74/138 (53.62%), Postives = 91/138 (65.94%), Query Frame = 2
Query:   71 KIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            K+GINGFGRIG +V R  L+   VE+VA+NDPFI   Y  YMFKYDS HG++K  ++KV D K L+   K +  +  R+P  IPW ++GAEY+VESTGVFT               VIISAPS DAPMYV+GVNE  Y
Sbjct:    4 KVGINGFGRIGRVVLRNALETGAVEVVALNDPFIEPHYAEYMFKYDSTHGRFKG-DIKV-DGKDLVIDGKRIKFYQERDPANIPWKDSGAEYIVESTGVFTTTEKASAHFKGGAKKVIISAPSADAPMYVMGVNEDTY 139          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_PIG (Glyceraldehyde-3-phosphate dehydrogenase OS=Sus scrofa GN=GAPDH PE=1 SV=4)

HSP 1 Score: 139.043 bits (349), Expect = 1.108e-32
Identity = 71/143 (49.65%), Postives = 91/143 (63.64%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+G+NGFGRIG LV R       V++VA+NDPFI   YM YMF+YDS HG++ H  +K ++ K ++ G K +T+F  R+P  I W + GA YVVESTGVFT               VIISAPS DAPM+V+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142          
The following BLAST results are available for this feature:
BLAST of EY735629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 293
Match NameE-valueIdentityDescription
G3P_CANFA3.807e-3349.65Glyceraldehyde-3-phosphate dehydrogenase OS=Canis ... [more]
G3P_XENLA4.972e-3351.05Glyceraldehyde-3-phosphate dehydrogenase OS=Xenopu... [more]
G3P_COTJA4.972e-3350.35Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn... [more]
G3P3_CAEBR4.972e-3350.34Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]
G3P_CRYPA6.494e-3353.96Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_PHANO8.481e-3350.35Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P3_CAEEL8.481e-3350.34Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]
G3P2_CAEEL8.481e-3350.34Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3P1_TRIKO8.481e-3353.62Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P_PIG1.108e-3249.65Glyceraldehyde-3-phosphate dehydrogenase OS=Sus sc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-A04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735629 ID=EY735629; Name=EY735629; organism=Citrus sinensis; type=EST; length=497bp
CACGCGTCCGAACTTTCTTCACCACTCTTTCACCGCTCAATTTCATCTCT
CGAGAATCATGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATT
GGTACGCTGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGT
TGCTGTTAATGATCCCTTTATCACAACCGATTACATGACATACATGTTTA
AGTACGACAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAG
GACGATAAGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGT
TAGGAACCCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTG
TGGAGTCGACTGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTG
AAGGGTGGTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCC
TATGTATGTTGTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTCA
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