EY735629

Overview
NameEY735629
Unique NameEY735629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.108e-32
Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKP 490
            M  + +GINGFGRIG LV R  LQ+  +++VA+NDPFI   YM YMFKYDS HG++K  E+ ++D K L+  +  ++VF    P EIPW + GA+YVVESTGVF                V++SAPS DAPM+V+GVNE ++ P
Sbjct:    1 MSDLCVGINGFGRIGRLVLRACLQKG-IKVVAINDPFIDLQYMVYMFKYDSTHGRYK-GEVSMEDGK-LIVDDHSISVFQCMKPHEIPWGKAGADYVVESTGVFLSIDKASSHIQGGAKRVVVSAPSPDAPMFVMGVNEDKFDP 141          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.108e-32
Identity = 72/142 (50.70%), Postives = 94/142 (66.20%), Query Frame = 2
Query:   71 KIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            ++GINGFGRIG +V R  L   +V++VA+NDPFI  +YM YMFKYDSVHG+++   ++ KD K ++ G K ++VF  R+P +IPW    A YVVESTGVFT               VIISAPS DAPM+V GVN  +Y  +L
Sbjct:    4 QVGINGFGRIGRIVLRASLSNPEVQVVAINDPFIPLEYMVYMFKYDSVHGRFQ-GTVEAKDGKLVVNG-KEISVFSERDPAQIPWGSVEAAYVVESTGVFTSIDAASAHLQGGAKKVIISAPSGDAPMFVCGVNLEKYTSDL 143          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.447e-32
Identity = 71/139 (51.08%), Postives = 91/139 (65.47%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            VK+GINGFGRIG +V R  ++ DD+++VAVNDPFI   Y  YM +YDS HG +K   + V+    ++ G+K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAPS DAPMYV+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIQIVAVNDPFIEPKYAEYMLRYDSTHGNFKG-TIAVEGSDLVVNGKK-VKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNESY 139          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Bos taurus GN=GAPDH PE=1 SV=4)

HSP 1 Score: 138.658 bits (348), Expect = 1.447e-32
Identity = 71/143 (49.65%), Postives = 92/143 (64.34%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            VK+G+NGFGRIG LV R       V++VA+NDPFI   YM YMF+YDS HG++ +  +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPM+V+GVN  +Y   L
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYNNTL 142          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P4_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caenorhabditis elegans GN=gpd-4 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.447e-32
Identity = 75/148 (50.68%), Postives = 90/148 (60.81%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK------PVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            M K  +GINGFGRIG LV R  +++D V++VAVNDPFIT DYM Y+FKYDS HGQ+K     V  D   L  +K       + VF  ++P  I W    A++VVESTGVFT               VIISAPS DAPMYVVGVN  +Y
Sbjct:    1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKG---TVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKY 145          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P1_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caenorhabditis elegans GN=gpd-1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.447e-32
Identity = 75/148 (50.68%), Postives = 90/148 (60.81%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK------PVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            M K  +GINGFGRIG LV R  +++D V++VAVNDPFIT DYM Y+FKYDS HGQ+K     V  D   L  +K       + VF  ++P  I W    A++VVESTGVFT               VIISAPS DAPMYVVGVN  +Y
Sbjct:    1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKG---TVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKY 145          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.889e-32
Identity = 66/143 (46.15%), Postives = 95/143 (66.43%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            + +GINGFGRIG LV R+ L R D+++VA+NDPFI  +Y +YMFKYDS HG++   E+  + +  ++ G+K + V+  R+P  IPW + G +YV++STGVF                V+I+APS  APM+VVGVNE +Y P+L
Sbjct:    3 ITVGINGFGRIGRLVLRIALSRKDIQIVAINDPFIAPEYASYMFKYDSTHGRYS-GEVSHEGENIVIDGKK-IRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYTPDL 143          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 1.889e-32
Identity = 69/142 (48.59%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   71 KIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEYKPEL 496
            K+GINGFGRIG +V R  ++ + V++VAVNDPFI   Y  YM KYDS HG++  +     D  TL+   K +  +  R+P +IPW+ETGAEYVVESTGVFT               VIISAPS D+PM+V+GVN  +Y  ++
Sbjct:    5 KVGINGFGRIGRIVFRNAIEHEGVDIVAVNDPFIEVHYAAYMLKYDSTHGRF--NGTVEFDGNTLIVNGKKIKFYAERDPAQIPWSETGAEYVVESTGVFTKQEKASLHLKGGAKKVIISAPSSDSPMFVMGVNNDQYTKDI 144          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.889e-32
Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = 2
Query:   59 MGKVKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            M  +K+GINGFGRIG +V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG + + E+K ++   L+   K V  +  R+P  IPW ETGA+YVVESTGVFT               VIISAPS DAPMYV+ VNE  Y
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAIEHPEVEIVAVNDPFIETKYAAYMLKYDSTHGIF-NGEIK-QEGNDLVINGKTVKFYTERDPAAIPWKETGADYVVESTGVFTTTDKAKAHLQGGAKKVIISAPSADAPMYVMVVNEKSY 140          
BLAST of EY735629 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.468e-32
Identity = 74/139 (53.24%), Postives = 89/139 (64.03%), Query Frame = 2
Query:   68 VKIGINGFGRIGTLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMYVVGVNEHEY 484
            VK+GINGFGRIG +V R  ++  DVE+VAVNDPFI   Y  YM KYDS HG +K   ++V     ++ G K V  +  R+P  IPW +TGAEY+VESTGVFT               VIISAPS DAPMYV+GVNE  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFKG-TIQVSGSDLIVNG-KTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPSADAPMYVMGVNEKTY 139          
The following BLAST results are available for this feature:
BLAST of EY735629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 293
Match NameE-valueIdentityDescription
G3P_ONCMY1.108e-3249.31Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorh... [more]
G3P2_RHIRA1.108e-3250.70Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P_SORMA1.447e-3251.08Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]
G3P_BOVIN1.447e-3249.65Glyceraldehyde-3-phosphate dehydrogenase OS=Bos ta... [more]
G3P4_CAEEL1.447e-3250.68Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caen... [more]
G3P1_CAEEL1.447e-3250.68Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caen... [more]
G3P_PICCI1.889e-3246.15Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_MONAN1.889e-3248.59Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_COLGL1.889e-3252.11Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_PODAN2.468e-3253.24Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-A04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735629 ID=EY735629; Name=EY735629; organism=Citrus sinensis; type=EST; length=497bp
CACGCGTCCGAACTTTCTTCACCACTCTTTCACCGCTCAATTTCATCTCT
CGAGAATCATGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATT
GGTACGCTGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGT
TGCTGTTAATGATCCCTTTATCACAACCGATTACATGACATACATGTTTA
AGTACGACAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAG
GACGATAAGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGT
TAGGAACCCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTG
TGGAGTCGACTGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTG
AAGGGTGGTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCC
TATGTATGTTGTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTCA
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