CX047198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.560e-24 Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = -2 Query: 2 IVVMAR--KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 364 +V MA KFFVGGNWKCNGT + + K++S LN A KS L ++ QN WV KGGAFTGE+S E L +L WVILGHSERR ++ E ++F+G K AYAL Sbjct: 57 VVAMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQV--KSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYAL 177
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = -2 Query: 2 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 172 VAAQNCWV+KGGAFTGEVSAEML NL +PWVILGHSERRALLNE+N+FVGDKVAYAL Sbjct: 3 VAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRALLNETNEFVGDKVAYAL 59
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.661e-24 Identity = 58/124 (46.77%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 2 SIVVMAR--KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 367 ++V MA KFFVGGNWKCNGT + + K+VS LN A+ KS L ++ QN WV KGGAFTGE+S E L ++ WVILGHSERR ++ E + F+G K AYAL Sbjct: 55 AVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQV--KSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYAL 176
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_NEUCR (Triosephosphate isomerase OS=Neurospora crassa GN=tpi-1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.754e-21 Identity = 54/118 (45.76%), Postives = 72/118 (61.02%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 MARKFFVGGN+K NGT +++K IV LN A+ ++L + + VAAQN + + GAFTGE+SA L++L + WVILGHSERR L ES++F+ K YAL Sbjct: 1 MARKFFVGGNFKMNGTRKDLKAIVDNLNNAQLDPNAEVVIAPPALYLDFVK-QNLQKPNVEVAAQNVFNKPNGAFTGEISATQLLDLGVKWVILGHSERRNELGESDEFIASKTKYAL 117
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_SCHJA (Triosephosphate isomerase OS=Schistosoma japonicum GN=TPI PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.367e-20 Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = -2 Query: 2 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 352 +RKFFVGGNWK NG+ + K ++ +L+EA + L + HVAAQNC+ GAFTGE+S M+ ++ WVILGHSERR++ NES++ V +KV +AL Sbjct: 4 SRKFFVGGNWKMNGSRADNKVLIHSLSEAHFCGDTEILIAAPFVYLNEV--RQSLAKEIHVAAQNCYKVPKGAFTGEISPSMIKDVGCDWVILGHSERRSIFNESDELVAEKVQHAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPISB_DANRE (Triosephosphate isomerase B OS=Danio rerio GN=tpi1b PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.331e-20 Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 RKFFVGGNWK NG + ++++ +TLN A+ +S L + VAAQNC+ GAFTGE+S M+ + + WVILGHSERR + ES++ +G KVA+AL Sbjct: 4 RKFFVGGNWKMNGDKKSIEELANTLNSAKLNPDTEVVCGAPTIYLDYA--RSKLDPNIDVAAQNCYKVAKGAFTGEISPAMIKDCGVKWVILGHSERRHVFGESDELIGQKVAHAL 117
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.045e-20 Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 M RKF VGGNWK NG ++ +IV+ L + K+++ + VAAQNCW GAFTGE+S M+ ++ + WVILGHSERR + E ++ V +KVA+AL Sbjct: 1 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYV--KTIIPDNVEVAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 116
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_DEBHA (Triosephosphate isomerase OS=Debaryomyces hansenii GN=TPI1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.193e-20 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 MAR+FFVGGN+K NGT E V KIV LN+AE ++ ++ V+AQNC+ + GA+TGE+S E + +L W + GHSERR ++ ES+DF+ K +AL Sbjct: 1 MARQFFVGGNFKMNGTRESVSKIVDGLNKAELPSNVEVVIAPPAPYIALAVNENKQKT-IEVSAQNCFDKASGAYTGEISPEQIKDLGATWTLTGHSERRTIIKESDDFIASKTKFAL 117
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_SCHMA (Triosephosphate isomerase OS=Schistosoma mansoni GN=TPI PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.783e-20 Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = -2 Query: 2 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 352 +RKFFVGGNWK NG+ ++ K++ L+EA + L+ + HVAAQNC+ GAFTGE+S M+ ++ WVILGHSERR + ES++ + +KV +AL Sbjct: 4 SRKFFVGGNWKMNGSRDDNDKLLKLLSEAHFDDNTEVLIAPPSVFLHEI--RKSLKKEIHVAAQNCYKVSKGAFTGEISPAMIRDIGCDWVILGHSERRNIFGESDELIAEKVQHAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_ORYLA (Triosephosphate isomerase OS=Oryzias latipes GN=tpi1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.859e-20 Identity = 51/116 (43.97%), Postives = 68/116 (58.62%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 R+FFVGGNWK NG E +++++STLN A +S L S VAAQNC+ GAFTGE+S M+ + WVILGHSERR + E+++ +G KVA+AL Sbjct: 4 RRFFVGGNWKMNGNKESLEELMSTLNTASLHEDTEVVCAAPSIYLDFA--RSGLDSRISVAAQNCYKVAKGAFTGEISPAMIKDCGADWVILGHSERRHVFGENDELIGQKVAHAL 117 The following BLAST results are available for this feature:
BLAST of CX047198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047198 ID=CX047198; Name=CX047198; organism=Citrus sinensis; type=EST; length=386bpback to top |