CX047198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPI2_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.879e-12 Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = -2 Query: 2 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 352 AR+ F+GGN+KCNG+ + +K V+++ + + + +AAQN ++ GA+TGE S EML+++ + VI+GHSERR ++ E+N+ K AL Sbjct: 3 ARRPFIGGNFKCNGSLDFIKSHVASIASYKIPESVDVVVAPSFVHLSTAIAANTSKC-LKIAAQNVYLEGNGAWTGETSVEMLLDMGLSHVIIGHSERRRIMGETNEQSAKKAKRAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_PSEHT (Triosephosphate isomerase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11 Identity = 40/116 (34.48%), Postives = 56/116 (48.28%), Query Frame = -2 Query: 5 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYA 352 ARK V GNWK NG+ E VK++ +N + +++ S Q GAFTGEV A+++ L +V++GHSERR++ ESND V K A A Sbjct: 3 ARKAMVAGNWKMNGSLELVKQMSDAINNVKSNEIDIVLFPPFPLV------SAMIASGVSTGTQTVSENTPGAFTGEVDAQLIKELGAQYVLVGHSERRSIYKESNDVVAAKFARA 112
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPI (Triosephosphate isomerase (Fragment) OS=Mycoplasma pirum GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11 Identity = 40/112 (35.71%), Postives = 54/112 (48.21%), Query Frame = -2 Query: 14 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKV 349 +K + GNWK N T +EVK+ LN + KSL +AAQ+ GAFTG +S L ++ I +VI+GHSERR NE++D V KV Sbjct: 2 KKRIIIGNWKTNKTQKEVKEFFKILNASLKNKNICCTFGVAPVAIHLELAKSLAPKQMIIAAQDANYISSGAFTGTISWSQLKDIKIKYVIVGHSERRMYYNETDDIVNKKV 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_FLAPJ (Triosephosphate isomerase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11 Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 R V GNWK N SEE + +++ L + V ++ VAAQN + GA+TGE+SA+ML ++ + VILGHSERRA+ +E++ + KV AL Sbjct: 2 RAKIVAGNWKMNKNSEETEDLINELIDKLPTNSNAKIIIAPTFINLASAVDHTEFTNIRVAAQNMHQAENGAYTGEISADMLKSIGVNTVILGHSERRAIFHETDAIISFKVDTAL 117
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_BACTN (Triosephosphate isomerase OS=Bacteroides thetaiotaomicron GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11 Identity = 45/117 (38.46%), Postives = 58/117 (49.57%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 RK V GNWK N T +E + LNEA V L+ + V A+NC + GA+TGEVSAEM+ + +VILGHSERRA E+ + +KV AL Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKASGAYTGEVSAEMVASTGAKYVILGHSERRAYYGETVAILEEKVKLAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4) HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11 Identity = 39/118 (33.05%), Postives = 55/118 (46.61%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 + RK + GNWK + T E KK VS L + L + + AQN + GAFTGE+S ML + + +VI+GHSERR + E ++F+ KV L Sbjct: 400 ITRKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVL 517
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_STRMU (Triosephosphate isomerase OS=Streptococcus mutans GN=tpiA PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 36/113 (31.86%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+RK + GNWK N T+ E ++ + + K + ++ VAAQNC+ GAFTGE S L L + +VI+GHSERR +E++ + K Sbjct: 1 MSRKPIIAGNWKMNKTAAEAREFIDAVKNNIPSNNLVDTVIGSPALFLEGMKKGVKGTELQVAAQNCYWEDFGAFTGETSPAALAALGVDYVIIGHSERRDYFHETDQEINKK 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_KLEPN (Triosephosphate isomerase OS=Klebsiella pneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 38/109 (34.86%), Postives = 53/109 (48.62%), Query Frame = -2 Query: 11 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVA 337 V GNWK NG+ V ++V+ L ++ S H+ AQN V GAFTGE SAEML ++ ++I+GHSERR ES++ + K A Sbjct: 6 VMGNWKLNGSRHMVNELVANLRTELAGVSGCAVAIAPPEMYLDLAKRAAEGSHIHLGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFA 114
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTH (Triosephosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 42/114 (36.84%), Postives = 56/114 (49.12%), Query Frame = -2 Query: 14 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKV 355 M+RK GNWK N T +E + V L + V++ S+ VAAQN + GAFTGEVS ML L + +VI+GHSERR E+++ V KV Sbjct: 1 MSRKVIAAGNWKMNKTPKEAVEFVQAL-KGRVADADTEVVVGVPFVCLPGVVEAAKGSNIKVAAQNMHWEEKGAFTGEVSGPMLAELGVDYVIIGHSERRQYFGETDETVNKKV 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_CARHZ (Triosephosphate isomerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 40/115 (34.78%), Postives = 56/115 (48.70%), Query Frame = -2 Query: 5 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYA 349 RK F+ GNWK T E V L ++ ++L S+ + AQN K GAFTGEVS ML ++ + +VILGHSERRA E+++ + K+ A Sbjct: 2 RKPFIAGNWKMYKTPVEAAGFVRELIDSLKDVSGVDVAVCPPFPALWPVKEALEGSNIALGAQNMHFEKEGAFTGEVSPAMLQDIGVKYVILGHSERRAYFGETDELINQKIKAA 116 The following BLAST results are available for this feature:
BLAST of CX047198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047198 ID=CX047198; Name=CX047198; organism=Citrus sinensis; type=EST; length=386bpback to top |