CX047197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 1.161e-19 Identity = 50/117 (42.74%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 32 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 +RKFFVGGNWK NG + ++++TLN A+ K L VAAQNC+ GAFTGE+S M+ +L WV+LGHSERR + ES++ +G KVA+AL Sbjct: 4 SRKFFVGGNWKMNGRKNNLGELINTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVANGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHAL 118
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.517e-19 Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 32 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 +RKFFVGGNWK NG + + ++++TLN + K L + F V+AQNC+ GAFTGE+S M+ + WVILGHSERR + ES++ +G KVA+AL Sbjct: 3 SRKFFVGGNWKMNGDKKSLTELINTLNSGKISADTEVVCGAPTIYLDFARQK--LDAKFAVSAQNCYKVAKGAFTGEISPAMIKDCGATWVILGHSERRHVFGESDELIGQKVAHAL 117
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_PIG (Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE=2 SV=4) HSP 1 Score: 94.7449 bits (234), Expect = 1.517e-19 Identity = 50/117 (42.74%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 32 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 ARKFFVGGNWK NG + ++++TLN A+ K L VAAQNC+ GAFTGE+ M+ +L WV+LGHSERR + ES++ +G KVA+AL Sbjct: 4 ARKFFVGGNWKMNGRKNNLGELINTLNAAKLPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVANGAFTGEIGPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHAL 118
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_LATCH (Triosephosphate isomerase OS=Latimeria chalumnae PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.517e-19 Identity = 49/116 (42.24%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 35 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 RKFFVGGNWK NG + + +++ TLN A+ K + F VAAQNC+ GAFTGE+S M+ + + WVILGHSERR + ES++ +G KV++AL Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIQTLNAAKVPFTGEIVCAPPEAYLDFARLK--VDPKFGVAAQNCYKVSKGAFTGEISPAMIKDCGVTWVILGHSERRHVFGESDELIGQKVSHAL 116
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPISA_DANRE (Triosephosphate isomerase A OS=Danio rerio GN=tpi1a PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.517e-19 Identity = 51/117 (43.59%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 32 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 +RKFFVGGNWK NG E + +++ TLN A +S L VAAQNC+ GAFTGE+S M+ + I WVILGHSERR + ES++ +G KVA+ L Sbjct: 3 SRKFFVGGNWKMNGDKESLGELIMTLNTASLNDETDVVCGAPSIYLDYA--RSKLDQRIGVAAQNCYKVPKGAFTGEISPAMIKDCGIDWVILGHSERRHVFGESDELIGQKVAHCL 117
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 1.981e-19 Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 32 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 +RKFFVGGNWK NG + + ++++TLN A+ K L + VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL Sbjct: 4 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQK--LDAKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHAL 118
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_CHICK (Triosephosphate isomerase OS=Gallus gallus GN=TPI1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.587e-19 Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 35 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 RKFFVGGNWK NG + + +++ TLN A+ K L + VAAQNC+ GAFTGE+S M+ ++ WVILGHSERR + ES++ +G KVA+AL Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQK--LDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHAL 117
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 32 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 +RKFFVGGNWK NG + + ++++TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL Sbjct: 3 SRKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHAL 117
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 32 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL Sbjct: 4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHAL 118
BLAST of CX047197 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 32 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 382 +RKFFVGGNWK NG + + +++ TLN A+ K L VAAQNC+ GAFTGE+S M+ + WV+LGHSERR + ES++ +G KVA+AL Sbjct: 4 SRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQK--LDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHAL 118 The following BLAST results are available for this feature:
BLAST of CX047197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047197 ID=CX047197; Name=CX047197; organism=Citrus sinensis; type=EST; length=382bpback to top |