CX047185

Overview
NameCX047185
Unique NameCX047185
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047185 vs. ExPASy Swiss-Prot
Match: GLYG5_SOYBN (Glycinin OS=Glycine max PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.058e-37
Identity = 80/177 (45.20%), Postives = 117/177 (66.10%), Query Frame = -2
Query:  180 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFSP 710
            NG+EE ICTMKL  NI  PS AD YNP+ GR++T+N   LP LR   LSA+   LY+N + +P WNLNA+SV  +TRG GR+++V   G  VFDG++R GQL+VVPQ  AV ++   +GLE++ FKT+  A++S +     V R +P +V+ NS+ + + + ++LKY      + +P
Sbjct:  344 NGVEENICTMKLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPDWNLNANSVT-MTRGKGRVRVVNCQGNAVFDGELRRGQLLVVPQNPAVAEQGGEQGLEYVVFKTHHNAVSSYI---KDVFRVIPSEVLSNSYNLGQSQVRQLKYQGNSGPLVNP 516          
BLAST of CX047185 vs. ExPASy Swiss-Prot
Match: LEG_CICAR (Legumin OS=Cicer arietinum GN=leg3 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.346e-31
Identity = 61/134 (45.52%), Postives = 91/134 (67.91%), Query Frame = -2
Query:  315 DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAE-NGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAM 713
            DNG EETICT +L  NI   S  D YNP+ GR+ TV  F+L  LR+++LSAE G+L++NAM  PH+NLNA+S++Y  +G  R+       G +VFDG++  G+ ++VPQ FA+  ++ +    +++FKTND A+
Sbjct:  310 DNGFEETICTARLHQNIGSSSSPDIYNPQAGRIKTVTSFDLQALRFLKLSAEFGSLHKNAMFVPHYNLNANSILYALKGRARLLYALNCKGNSVFDGELEAGRALIVPQNFAIAAKSLSDRFSYVAFKTNDRAL 443          
The following BLAST results are available for this feature:
BLAST of CX047185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GLYG5_SOYBN1.058e-3745.20Glycinin OS=Glycine max PE=1 SV=1[more]
LEG_CICAR7.346e-3145.52Legumin OS=Cicer arietinum GN=leg3 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12F08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12F08-K15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047185 ID=CX047185; Name=CX047185; organism=Citrus sinensis; type=EST; length=822bp
TTTTTTTTTACGGCAAAAACATTTAGTTTTCTTATTTCACCAGAACAAAA
CTTACAGCAGCAGTACACTTTCGAGCCAACAGCAAGGACTTTATTCCTTA
TGTACATACACATATATAGACCCTTAATATAAGCTCATTACTTTGATCAC
GCACTAACTAATTACTGTGACCTAGGCCCTGGACTAAACACAGTCAGCTC
CTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGGAACG
AGTTCTGGATAACGTCCAACGGCAGCCCTCTAATCACCGAAGCCCTTCCG
GCCAGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCCACTC
CAATCCACGGTTGCTTGCCCTCTTCACCACGGCGAAGCCCTGCGGGACAA
CGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCCGTTC
TCCGCCACAATTTGCATCCTGCCGTTGCCCCTTGTTATGTAGACTACGCT
GTGGGCATTCAAGTTCCAGTGTGGCGCCATCATGGCATTCTGGTAGAGGT
TCCCTTTCTCAGCACTAAGCTGAATGTATCGAAGGATAGGAAGGTTGAAT
CTGTTGACGGTGGTGACGCGTCCGCCGCGGGGGTTGTACGCGTCAGCACC
CGATGGGTCATTGATGTTGTGCTTTAGCTTCATTGTACAGATAGTTTCCT
CGATGCCATTGTCTCCGCTTCCTTGGAATTCTTGTTCTTGTTCTTGTTCT
TGTTCTCTGCCTCTTTGAGGTGACAGTACTCTCAGCTCTTCCTCGACTCT
GACAATAATCCCCTTCTGCATC
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