CX047179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047179 vs. ExPASy Swiss-Prot
Match: RL10_NATPD (50S ribosomal protein L10e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl10e PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19 Identity = 56/170 (32.94%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 52 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 558 M +PA YR I Y + + G+P K+ Y +G + +++ + L+ E+ + +LEA+R++ N+ M K G+D + + +R P V+R NK + AGADR+ GMR AFGK GT AR+ G+ + ++ C ++ A++A RRA K I V R Sbjct: 1 MSDKPASMYRDIDKPAYTRREYITGIPGSKVAQYKMGNFEADPEDYEVQISLIVDEEVQIRHGSLEASRLSANRRMLKELGEDGDYKMILRKFPHQVIRENKQATGAGADRVSDGMRQAFGKIVGTAARINKGERVFTIWCHPEDADAAKDAFRRAYNKISPPCTIKVER 170
BLAST of CX047179 vs. ExPASy Swiss-Prot
Match: RL10_NANEQ (50S ribosomal protein L10e OS=Nanoarchaeum equitans GN=rpl10e PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 47/165 (28.48%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 73 CYRQIKNKPYPK------SRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKML-SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKD-SNSHHAQEALRRAKFKFPGRQK 543 CYR+++ PY + + G +R++ +G + E+ + LV+ E + A+EA R+ NKY+ GK + +R +P H+ R ++ AGADR+ GMR +FG+P+G ++ G+ LLS+ D + + + L+ A+ K P R + Sbjct: 9 CYRKLE-VPYTRVSRSKNKNYIPGAKPTMVRLFHMGELTRNPSEWQYEASLVAKENHQIRDNAIEAIRVMVNKYLESTLGKKRYLFIIRKYPHHIYREKPVVGGYAGADRISQGMRLSFGRPKGRAVQIYEGEKLLSIFFDDITKAKDIKYFLQVARSKLPWRYR 172 The following BLAST results are available for this feature:
BLAST of CX047179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047179 ID=CX047179; Name=CX047179; organism=Citrus sinensis; type=EST; length=817bpback to top |