CX047178

Overview
NameCX047178
Unique NameCX047178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_STAAM (Methionine aminopeptidase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=map PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.242e-32
Identity = 73/218 (33.49%), Postives = 111/218 (50.92%), Query Frame = -3
Query:  285 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLV-KVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADP--VVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 929
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD  +  V  V       AI+   PG +   IGK + + A + +  V++   GHG+G   H  P  V+ ++   D   +       IEP ++  +       + W   T D S  AQ EHT+++T+DG  + T+
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTK 248          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_STAAC (Methionine aminopeptidase OS=Staphylococcus aureus (strain COL) GN=map PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.242e-32
Identity = 73/218 (33.49%), Postives = 111/218 (50.92%), Query Frame = -3
Query:  285 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLV-KVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADP--VVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 929
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD  +  V  V       AI+   PG +   IGK + + A + +  V++   GHG+G   H  P  V+ ++   D   +       IEP ++  +       + W   T D S  AQ EHT+++T+DG  + T+
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTK 248          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_STAA1 (Methionine aminopeptidase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=map PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.242e-32
Identity = 73/218 (33.49%), Postives = 111/218 (50.92%), Query Frame = -3
Query:  285 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLV-KVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADP--VVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 929
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD  +  V  V       AI+   PG +   IGK + + A + +  V++   GHG+G   H  P  V+ ++   D   +       IEP ++  +       + W   T D S  AQ EHT+++T+DG  + T+
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTK 248          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_HELPJ (Methionine aminopeptidase OS=Helicobacter pylori J99 GN=map PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.793e-31
Identity = 73/221 (33.03%), Postives = 121/221 (54.75%), Query Frame = -3
Query:  285 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY-----RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 932
            V+PG++  E+DK     I  + A P+  G  GFP SVC S+NE + HGIP    L++GD I +D+ V ++GY+GD++ T   G +  +   L+  +K+ L  AIS    GM +K++ + ++       +  ++ F GHGIG+  H +P + +Y     + N   ++     F +EPM+      P +  D W++V+ DG  ++  EHTI I  + A ILT+
Sbjct:   32 VRPGVSLLELDKMAEDFIKSSHARPAFKGLYGFPNSVCMSLNEVVIHGIPTDYVLQEGDIIGLDLGVEVDGYYGDSALTLPIGAISPQDEKLLACSKESLMHAISSIRVGMHFKELSQILEGAITERGFVPLKGFCGHGIGKKPHEEPEIPNYLEKGVKANSGPKIKEGMVFCLEPMVCQKQGEPKILADKWSVVSVDGLNTSHHEHTIAIVGNKAVILTE 252          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_HELPY (Methionine aminopeptidase OS=Helicobacter pylori GN=map PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.058e-31
Identity = 72/221 (32.58%), Postives = 121/221 (54.75%), Query Frame = -3
Query:  285 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY-----RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 932
            V+PG++  E+DK     I  + A P+  G  GFP SVC S+NE + HGIP    L++GD I +D+ V ++GY+GD++ T   G +  +   L+  +K+ L  AI+    GM +K++ + ++       +  ++ F GHGIG+  H +P + +Y     + N   ++     F +EPM+      P +  D W++V+ DG  ++  EHTI I  + A ILT+
Sbjct:   32 VRPGVSLLELDKMAEDFIKSSHARPAFKGLYGFPNSVCMSLNEVVIHGIPTDYVLQEGDIIGLDLGVEVDGYYGDSALTLPIGAISPQDEKLLACSKESLMHAINSIRVGMHFKELSQILESTITERGFVPLKGFCGHGIGKKPHEEPEIPNYLEKGVKPNSGPKIKEGMVFCLEPMVCQKQGEPKILADKWSVVSVDGLNTSHHEHTIAIVGNKAVILTE 252          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_STAES (Methionine aminopeptidase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=map PE=3 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 5.216e-31
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = -3
Query:  285 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLV-KVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADP--VVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 929
            KPG+TT E+D     +  ++GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G  D   +  V  V       A+    PG +   IGK +   A + +  V++   GHG+G+  H  P  V+ ++   D   +   Q   +EP ++  +       + W   T+D S  AQ EHT+++T+DG  + T+
Sbjct:   31 KPGVTTRELDHIAKDLFEEHGAISAPIHDENFPGQTCISVNEEVAHGIPGKRVIREGDLVNIDVSALKNGYYADTGISFVVGKSDQPLKQKVCDVATMAFENAMKKVKPGTKLSNIGKAVHATARQNDLTVIKNLTGHGVGQSLHEAPNHVMNYFDPKDKTLLKEGQVIAVEPFISTHATFVTEGKNEWAFETKDKSYVAQIEHTVIVTKDGPLLTTK 248          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_STAEQ (Methionine aminopeptidase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=map PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.216e-31
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = -3
Query:  285 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLV-KVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADP--VVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 929
            KPG+TT E+D     +  ++GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G  D   +  V  V       A+    PG +   IGK +   A + +  V++   GHG+G+  H  P  V+ ++   D   +   Q   +EP ++  +       + W   T+D S  AQ EHT+++T+DG  + T+
Sbjct:   31 KPGVTTRELDHIAKDLFEEHGAISAPIHDENFPGQTCISVNEEVAHGIPGKRVIHEGDLVNIDVSALKNGYYADTGISFVVGKSDQPLKQKVCDVATMAFENAMKKVKPGTKLSNIGKAVHATARQNDLTVIKNLTGHGVGQSLHEAPNHVMNYFDPKDKTLLKEGQVIAVEPFISTHATFVTEGKNEWAFETKDKSYVAQIEHTVIVTKDGPLLTTK 248          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM2_BACSU (Methionine aminopeptidase 2 OS=Bacillus subtilis GN=mapB PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.398e-28
Identity = 67/218 (30.73%), Postives = 112/218 (51.38%), Query Frame = -3
Query:  285 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD-SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADP--VVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 929
            +PG++T ++D     ++ ++GA  +P     FP   C SVN+ + HGIP  S+ L+ GD +NID++    G++ DT  +F  G+ ++    L +  ++   K +     G    +IG+ +   A    + V++   GHGIGR  H  P  ++ +Y   D+          +EP ++  +   V   D WT  T D S+ AQ EHTI+IT+D   ILT+
Sbjct:   31 EPGMSTKDLDLIGKAVLDEHGAVSAPEKEYDFPGVTCISVNDEVAHGIPSTSKILKAGDLVNIDISAEFGGFYSDTGISFVLGEGEERLHKLCQCAENAFQKGLQQAKAGKRQNQIGRAVYHEARSQGFTVIKTLTGHGIGRSLHEAPNHIMNYYDPFDNALFKNGTVIALEPFISTKAETIVEAGDGWTFKTPDKSMVAQVEHTIVITKDEPIILTK 248          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_MYCPN (Methionine aminopeptidase OS=Mycoplasma pneumoniae GN=map PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.550e-22
Identity = 64/214 (29.91%), Postives = 102/214 (47.66%), Query Frame = -3
Query:  288 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAIS-VCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHG-RMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILT 923
            G +   ID+A+ Q I   GA  +   Y  FP   C S+NE + HGI D+R     D + +D+ + LNGY  D + T       +  + L++VT+ C    +     P      +   IQ + +   Y +++QF GHG G   H +P++L+Y   D G ++       IEPM+   S   VM +++W ++T     +   E   +IT  G E LT
Sbjct:   34 GKSLTAIDQALKQFIESKGATCAFHKYQNFPGFNCLSLNETVIHGIADNRVFGVKDKLTLDIGINLNGYICDAAFTVLGPKAPEPMQTLLEVTEACFTAVVEPQLRPNNPTGNVSHAIQTYFESKGYYLLKQFGGHGCGIKVHEEPLILNYGKPDTGTKLEPGMVLCIEPMVMTDSDAMVMHNNSWNVLTPKSRYNCHVEQMYVITTSGFECLT 247          
BLAST of CX047178 vs. ExPASy Swiss-Prot
Match: AMPM_MYCGA (Methionine aminopeptidase OS=Mycoplasma gallisepticum GN=map PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 9.860e-22
Identity = 63/214 (29.44%), Postives = 103/214 (48.13%), Query Frame = -3
Query:  288 EIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM-EYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVL-NQTFTIEPMLTIGS----INPVMWDDNWTI-VTEDGSLSAQFEHTILITRDGAEILT 908
            EID+ +   +  + A     GY GF    C S+N+ I HG+ +       D + ID+ + L+ Y+ D++ T    DV+   + L +VT +C+ + +    P       +G   +++A +Y Y V++ F GHG G   H DP++L+Y       ++  N    IEPM         I+P   DD+W++           +EH +LI  D AEILT
Sbjct:   39 EIDQMLRDFVSQHHANSCYHGYLGFKGYHCLSLNQTIIHGLANDEIFTSKDKLTIDIGIELDNYYCDSAFTILGPDVNPRQKLLSEVTHNCIFELVKKIVPNQTTTNDLGIWTEEYAKKYGYSVIKDFGGHGCGIKIHEDPIILNYGTKKSSELLTPNMVICIEPMFFEKDNRYYIDP---DDSWSVKPVNKNQYVCHWEHMVLIKEDQAEILT 249          
The following BLAST results are available for this feature:
BLAST of CX047178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
AMPM_STAAM1.242e-3233.49Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_STAAC1.242e-3233.49Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_STAA11.242e-3233.49Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_HELPJ1.793e-3133.03Methionine aminopeptidase OS=Helicobacter pylori J... [more]
AMPM_HELPY3.058e-3132.58Methionine aminopeptidase OS=Helicobacter pylori G... [more]
AMPM_STAES5.216e-3132.11Methionine aminopeptidase OS=Staphylococcus epider... [more]
AMPM_STAEQ5.216e-3132.11Methionine aminopeptidase OS=Staphylococcus epider... [more]
AMPM2_BACSU5.398e-2830.73Methionine aminopeptidase 2 OS=Bacillus subtilis G... [more]
AMPM_MYCPN7.550e-2229.91Methionine aminopeptidase OS=Mycoplasma pneumoniae... [more]
AMPM_MYCGA9.860e-2229.44Methionine aminopeptidase OS=Mycoplasma gallisepti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12F03_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12F03-K5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047178 ID=CX047178; Name=CX047178; organism=Citrus sinensis; type=EST; length=934bp
CTTTTTTTTGACAAACGATGCAAATACCATTTAAGAATTATTGATTCTCA
GTACAAGCAAAATTATATGTTCATTGTCTGTAAAATCACCAATCAAAGAT
TAAAAAGTAGCACTTACAGAAAAGATGAAAAAGAAACAATGATAAAAACA
AGAATGCAATGCCTCCACCAACAACAAAATTTTGATTAGGAAGAGGCAAT
CCAATGACATCCAATTGGTGTATATTCTCCGAATGGGCAGATCTGCAACT
ATTTAATGTAATGGTACGAATTCCATGTTTAACACTGCGTTAATATCTCA
GCACCGTCCCTGGTAATAAGAATAGTGTGCTCAAATTGTGCTGACAGGCT
CCCGTCTTCTGTAACAATTGTCCAGTTGTCATCCCACATAACAGGATTTA
TGCTACCTATTGTCAGCATCGGTTCTATGGTGAAAGTTTGATTCAACACC
ATGCGTCCATGATCATTGTTCCTATAGTGTAAAACAACAGGATCCGCATG
GAAAACACGTCCAATCCCATGGCCAACGAATTGTCGAACAACGCCATAAT
TATATCTATCTGCATGGTCCTGAATGGTTTTGCCAATTTTCTTGTACTCC
ATTCCCGGTGCACATACCGATATAGCTTTATGTAGACAATCTTTGGTTAC
CTTCACCAGATTTCTGGCTTCATCATCAACATCTCCACAAAAGAAAGTCG
CTGATGTATCACCATGATAACCATTTAGATAAACAGTCACATCAATATTT
ATAGTATCACCATCCTCAAGTGCACGGGAATCCGGTATTCCGTGGCAGAT
ACATTCATTCACTGATGTACAGACACTCTTTGGAAACCCACCATAGCCAA
GAGGTGAGGGATATGCTCCATTATCAATAATCATTTGATGAACTGCTTTG
TCAATTTCATCTGTTGTAATACCTGGCTTAACTA
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