CX047137

Overview
NameCX047137
Unique NameCX047137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_SCLS1 (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=cia1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 67/250 (26.80%), Postives = 99/250 (39.60%), Query Frame = -3
Query:  112 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE---GNSNEWIKDHVFEDHKSSVNSIDWAPHE-LGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA-PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV----LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDG 834
            L GH   +  VA++    G  LASCS D T+ IW+E      +E+    V +DH + V  + W   +  G  LA GS D  I +     +G W+T    + H   V S+ W P  +          + P  +L S   D TV++W       KM   P     + +        N G+P     S    G V         + WE       +HD   PVY ++WS     +    G+  V ++EE   G
Sbjct:  161 LEGHDSEIKHVAYSPS--GQWLASCSRDKTIWIWEEIGDEGEDEFETVAVLQDHTADVKCVCWRKDDGNGEVLASGSYDDTILLSKEDGEGDWETIAKLEGHDGTVWSLDWEPDVSIKSDSSEESSVPPTPRLLSSSADMTVRIWS------KMPTPPPQNKPSYF--------NAGIP-----STMRPGPV--------NETWECTATLPKVHDL--PVYSINWSKYSGRIVSTGGDGRVAIYEERTKG 379          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_CANGA (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Candida glabrata GN=CIA1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 73/263 (27.76%), Postives = 114/263 (43.35%), Query Frame = -3
Query:  151 IKIIGVGNNTSQHLAKLSG--HKGAVWEVAWAHPKFGSILASCSFDGTVIIW-------KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVF-TARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMH--TDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD----QW--EGKVLHDFKTPVYRVSWSLTGNILAV-ADG 882
            IK++ + N     L  L    HK AV  VAW       +LA+ SFD T+ IW       +EG   E     + E H++ V  I W+  + G  LA  S D ++ ++ T  A   ++   + Q H   V  V W   T    L  S +            D+TV++WK Y+  W  +C   L  H  T W  D +   +       + S S+D  V +W    + +    +W  E  + +  ++ +Y V+WS +G I +V ADG
Sbjct:   37 IKVLQLKNGKENLLDVLDDTVHKKAVRSVAWR--PHSDLLAAGSFDSTISIWTQSDLDLEEGAKLEMELLAIIEGHENEVKGISWS--QDGCLLATCSRDKSVWIWETDEAGEEYECISVLQEHSQDVKHVVW--HTKHNLLASSSY------------DDTVRIWKDYDDDW--ECAAVLTGHEGTIWCSDFSKEED----PIRLCSGSDDSTVRVWKYIGDDEDDQQEWVCESTLPNAHRSQIYGVAWSPSGRIASVGADG 275          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: HIRA_ORYSJ (Protein HIRA OS=Oryza sativa subsp. japonica GN=Os09g0567700 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 58/199 (29.15%), Postives = 80/199 (40.20%), Query Frame = -3
Query:  151 DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG--------------WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA------REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG 687
            DH  +VN + WA H  G  LA GS D  I +   +A  G              W      + H   V  ++W+P  +               L SG  DNTV +W + NGI    C   L+ H+  V+ V W P +G   S IAS S+D  VIIW  +      R    W   +   F     R++WS  G+ +    G
Sbjct:   64 DHFGTVNCVRWAHH--GRYLASGSDDQVIQIHERKAGTGTSEFGSGEPPDVENWKVVMTLRGHTADVVDLNWSPDDST--------------LASGSLDNTVHIWSMANGI----CTAVLRGHSSLVKGVTWDP-IG---SFIASQSDDKTVIIWRTSDWSLAHRTEGHWSKSLGSTF---FRRLAWSPCGHFITTTHG 235          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: HIRA_MAIZE (Protein HIRA OS=Zea mays PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 58/185 (31.35%), Postives = 76/185 (41.08%), Query Frame = -3
Query:  265 DGTVIIWK-----EGNSNEWIKDHVF---EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG--------------WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 753
            D  V IW      + N+N   K  +     DH  SVN + WA H  G  LA GS D  I +   +A  G              W      + H   V  +SW+P  +               L SG  DNT+ +W + NGI    C   L+ HT  V+ V W P +G   S IAS S+D  V+IW
Sbjct:   34 DQKVRIWSMESVHKDNTNNDSKQRLLATLRDHFGSVNCVRWAKH--GRYLASGSDDQVILIHERKAGSGTSEFGSGEPPDAENWKVIMTWRGHTADVVDLSWSPDDST--------------LASGSLDNTIHIWNMNNGI----CTAVLRGHTSLVKGVTWDP-IG---SFIASQSDDKTVMIW 194          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11
Identity = 64/238 (26.89%), Postives = 107/238 (44.96%), Query Frame = -3
Query:  130 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP---VYRVSWSLTGNILAVADGNNNVTLW 834
            L+GH+  V  VA +  K  +++AS S DGTV +W      E++++  F  H  S+  +D++P+  G   A    D  + ++    DG  +  +  + H   V SVS++P                + L S   D TV++W   +G         L  HT  V D  ++P+      T+ S   DG++ +W +       +G ++  F  P    + V+W   GN+LAVA  +  V LW
Sbjct:  556 LTGHRDGVTSVAISSHK--NLIASASRDGTVHLWTP--QGEFLRE--FTGHTGSIYRVDFSPN--GKIFATAGQDQTVKIWDL--DG--NLLQTLKGHQDSVYSVSFSPDG--------------EILASTSRDRTVRLWHWRSG----KTLAVLGGHTKSVDDAQFSPD----GQTLVSVCRDGQIRLWDL-------DGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLW 752          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: HAT2_CRYNE (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans GN=HAT2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11
Identity = 63/222 (28.38%), Postives = 91/222 (40.99%), Query Frame = -3
Query:  253 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID------QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM-----------------HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 849
            Q L   +GH   V +V W HPK  ++  S S DG ++IW   + N        + H + +N I +AP    L L  GSSD  I++        WD  ++       +AH   V  +SW+P++            PV    S   D  V +W L       D   A Q                  HT  V D++W+P+      TIASASED  + +W  +R
Sbjct:  231 QPLRLYTGHSAYVADVEW-HPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSSEYLFLT-GSSDNTIAL--------WDLRKLSTKHHSFEAHTNDVLQLSWSPTS------------PVH-FASASADRRVHIWDL-------DAIGAEQTPDDAEDGPPELLFVHGGHTSKVCDISWSPS---SPWTIASASEDNILQVWEPSR 419          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_TRIAD (Probable cytosolic iron-sulfur protein assembly protein OS=Trichoplax adhaerens GN=TRIADDRAFT_20668 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 60/239 (25.10%), Postives = 102/239 (42.68%), Query Frame = -3
Query:  130 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFT-ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD---QWEG--KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 828
            GH   +  VAW+    G+ LASCSFD T+ IW +    ++      E H++ V  ++W+    G+ LA  S D +  ++     D  ++ + +   H   V  V W+P     ALV + +            DNT+K++K  +  W  +C   L  H   V    W+ +         S  +D  + IW   + G    +W     +      P+Y V WS   N +A A G++ + ++
Sbjct:   43 GHTRTIRSVAWS--PCGNYLASCSFDATICIWSK-KDGDFECMATLEGHENEVKCVNWS--SSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPK--ENALVSASY------------DNTIKIYKEVDDDW--ECSHTLIGHESTV----WSLSFHSSGELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACGDDAIRIF 256          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: CIAO1_EMENI (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Emericella nidulans GN=cia1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 74/310 (23.87%), Postives = 119/310 (38.39%), Query Frame = -3
Query:  124 GHKGAVWEVAWAHPKFG-SILASCSFDGTVIIWK------------EGNSN----------------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG--GWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAW--APNLGLPKST--------------------IASASEDGKVIIW-----------------TVAREG---DQWEGKVL--HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 828
            GHK ++   AW     G S+LA+ SFD TV IW+            +GN N                EW    + + H S V S+ W+    G+ LA  S D +I ++    DG   ++T  + Q H   V  V+W P+               + L SG  D+T+++W+     W       ++ HT  V  + W  A N+  P ++                    + S S D  V +W                 ++ R     + WE  V+  H  + P+Y V+WS    +LA    +  + ++EE
Sbjct:   67 GHKRSIRTCAWKPNVSGESVLATGSFDATVGIWRRWDDYGEEETLAQGNKNTKNFGAEEDREEDEDDEWRFAVLLDGHDSEVKSVSWSAS--GMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAWHPAE--------------ECLASGSYDDTIRIWREDIDDWGQ--VACIKGHTGTVWGIDWEDAENVPFPSTSNGVSGQEEEWKTWHALSGPRLVSCSHDQSVRVWRRQPKAQLNTAGASSIPSIIRPSGTDETWEEDVVLPHAHELPIYAVAWSRRTGLLASVGADGRLVVYEE 358          
BLAST of CX047137 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 72/269 (26.77%), Postives = 113/269 (42.01%), Query Frame = -3
Query:  121 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS-----------------TAPGA----LVGSG-------FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEG---KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 834
            L GH G+VW VA++  +    +AS S D T+ IW   +          E H   V S+ ++P   G  +A GS D  I ++ A +  G  T  ++  H   V SV+++P                  TA G     L G G       F    Q++ SG  D T+K+W   +G     C   L+ H  WV+ V ++P+       +AS S+D  + IW      D   G   + L      V+ V++S  G  +A    +  + +W+ A
Sbjct:  879 LEGHGGSVWSVAFSPDR--ERVASGSDDKTIKIWDAASGT---CTQTLEGHGGRVQSVAFSPD--GQRVASGSDDHTIKIWDAAS--GTCTQTLE-GHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASG----TCTQTLEGHGGWVQSVVFSPD----GQRVASGSDDHTIKIW------DAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAA 1123          
The following BLAST results are available for this feature:
BLAST of CX047137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
CIAO1_SCLS11.461e-1126.80Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_CANGA1.461e-1127.76Probable cytosolic iron-sulfur protein assembly pr... [more]
HIRA_ORYSJ1.909e-1129.15Protein HIRA OS=Oryza sativa subsp. japonica GN=Os... [more]
HIRA_MAIZE1.909e-1131.35Protein HIRA OS=Zea mays PE=1 SV=1[more]
Y143_SYNY32.493e-1126.89Uncharacterized WD repeat-containing protein slr01... [more]
HAT2_CRYNE2.493e-1128.38Histone acetyltransferase type B subunit 2 OS=Cryp... [more]
CIAO1_TRIAD3.256e-1125.10Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_EMENI3.256e-1123.87Probable cytosolic iron-sulfur protein assembly pr... [more]
HETE1_PODAN5.553e-1126.77Vegetative incompatibility protein HET-E-1 OS=Podo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12D02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12D02-G3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047137 ID=CX047137; Name=CX047137; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTTAAGAGGTTCTAAAATGCAATCTTGTATTTCACG
ATAAAAATTTGAAAAACTTAAAAGAGTCTTACGGCCCAACTGCAGTCACC
TGTCGCCACTCCCCATCCACTGCTTCTTCCCACAGTGTTACATTGTTGTT
TCCATCAGCCACAGCCAATATGTTTCCAGTCAGTGACCAGCTGACTCTAT
AAACAGGGGTCTTGAAGTCATGCAACACCTTACCTTCCCATTGATCTCCT
TCCCTGGCCACAGTCCATATAATAACTTTCCCATCCTCCGATGCACTTGC
AATAGTAGATTTTGGAAGCCCCAAGTTGGGAGCCCAAGCAACATCTCTAA
CCCAATCAGTATGCATTTGAAGAGCTGGAAAGCAGTCCATCTTCCAAATT
CCATTGTACAGCTTCCACACCTTCACGGTATTATCACAACCACCTGAACA
AAGCTTCTGAACTGGGTCAAGAAAACCAGAACCCACAAGTGCACCGGGAG
CTGTTGATGGGGCCCATGAAACTGAAGTCACACCAACCGGATGAGCTTGG
TCAATCCTAGATGTATCCCAGCCGCCATCAGCTCTAGCCGTAAAAACTGA
TATGTTCCCATCTGACGAACCACAAGCCAAACATAGACCGAGCTCATGAG
GCGCCCAATCAATCGAATTGACTGACGATTTGTGGTCCTCAAAAACATGA
TCTTTGATCCACTCATTACTGTTACCCTCCTTCCATATTATGACAGTCCC
GTCAAAAGAACAGGATGCAAGTATAGACCCAAATTTTGGGTGAGCCCAAG
CCACCTCCCAAACAGCACCTTTATGACCACTAAGCTTTGCGAGATGCTGA
GAGGTGTTATTGCCCACACCAATGATCTTAATTG
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