CX047101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_LEPVR (30S ribosomal protein S8, chloroplastic OS=Lepidium virginicum GN=rps8 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.651e-53 Identity = 107/136 (78.68%), Postives = 119/136 (87.50%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIADIITSIRNADMNRKGTVRI STNITE++VKILLREGFIEN RK +N + FL+LTLRH+RN+K Y+ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR AR + IGGEILCYIW Sbjct: 1 MGKDTIADIITSIRNADMNRKGTVRIRSTNITESIVKILLREGFIENVRK--HRENNQYFLILTLRHKRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARRKSIGGEILCYIW 134
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_DRANE (30S ribosomal protein S8, chloroplastic OS=Draba nemorosa GN=rps8 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.768e-53 Identity = 107/136 (78.68%), Postives = 119/136 (87.50%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIADIITSIRNADMNRKG VRI STNITE++VKILLREGF+EN RK EN + FL+LTLRHRRN+K Y+ LNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL++IGGEILCYIW Sbjct: 1 MGKDTIADIITSIRNADMNRKGMVRIESTNITESIVKILLREGFVENVRKHRENNHY--FLILTLRHRRNKKESYKTFLNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKKIGGEILCYIW 134
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_CHLSC (30S ribosomal protein S8, chloroplastic OS=Chloranthus spicatus GN=rps8 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 6.227e-53 Identity = 113/138 (81.88%), Postives = 119/138 (86.23%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNI--TENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIADIITSIRNADM +KGTVRIASTNI +EN+V+ILLREGFIEN RK +N K FLV TLRHRRNRKG YR IL KRISRPGLRIY NY+RIPRIL GMGIVILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 1 MGKDTIADIITSIRNADMEKKGTVRIASTNINISENIVQILLREGFIENVRK--HRENNKYFLVSTLRHRRNRKGAYRNIL--KRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEGIGGEILCYIW 134
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_DRIGR (30S ribosomal protein S8, chloroplastic OS=Drimys granadensis GN=rps8 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 8.133e-53 Identity = 109/136 (80.15%), Postives = 118/136 (86.76%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 M KDTIADIITSIRNADM++KGTVRIASTNITEN++KILLREGFIEN RK +N K L+LTLRHRRNRKG YR IL K ISRPGLRIY NY+RIPRIL G+GIVILSTSRGIMTDR ARL+ IGGEILCYIW Sbjct: 1 MSKDTIADIITSIRNADMDKKGTVRIASTNITENIIKILLREGFIENVRK--HRENNKYLLILTLRHRRNRKGTYRNIL--KCISRPGLRIYSNYKRIPRILGGIGIVILSTSRGIMTDREARLKGIGGEILCYIW 132
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_ILLOL (30S ribosomal protein S8, chloroplastic OS=Illicium oligandrum GN=rps8 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.812e-52 Identity = 110/136 (80.88%), Postives = 116/136 (85.29%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIADIITSIRNADM KG VRIASTNITEN+VKILLREGFIEN RK ++ K FLV TLRHRRNRKG YR IL KRISRPGLRIY NY+ IPRIL GMG+VILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 1 MGRDTIADIITSIRNADMGTKGMVRIASTNITENIVKILLREGFIENVRK--HRESNKYFLVSTLRHRRNRKGTYRNIL--KRISRPGLRIYSNYQGIPRILGGMGVVILSTSRGIMTDREARLEGIGGEILCYIW 132
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_MORIN (30S ribosomal protein S8, chloroplastic OS=Morus indica GN=rps8 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 4.036e-52 Identity = 109/138 (78.99%), Postives = 118/138 (85.51%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRR--NRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 M KDTIA+I+TSIRNADMN+K TVRI TNITEN++KILLREGFIEN RK E+ N F VLTLRHRR NRKGP + +LNLKRISRPGLRIY NY+RIPRIL GMGIVILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 1 MSKDTIANILTSIRNADMNKKRTVRIPYTNITENILKILLREGFIENMRKHQESNNL--FFVLTLRHRRKRNRKGPDKTVLNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEGIGGEILCYIW 136
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_PHAVU (30S ribosomal protein S8, chloroplastic OS=Phaseolus vulgaris GN=rps8 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 6.885e-52 Identity = 102/136 (75.00%), Postives = 117/136 (86.03%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIA+IIT IRNAD+N+KG V++ TNITE +VKILLREGF+EN RK +N K FLVLTLR+RRNRK Y+ LNLKRIS PGLRIY+NY++IPRIL GMGIVILSTSRGIMTDR ARLE+IGGE+LCYIW Sbjct: 1 MGKDTIANIITYIRNADINKKGMVQLPFTNITEKIVKILLREGFVENIRK--HRENDKSFLVLTLRYRRNRKESYKSFLNLKRISTPGLRIYYNYKKIPRILGGMGIVILSTSRGIMTDREARLEKIGGEVLCYIW 134
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_DIOEL (30S ribosomal protein S8, chloroplastic OS=Dioscorea elephantipes GN=rps8 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.534e-51 Identity = 106/136 (77.94%), Postives = 120/136 (88.24%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIA+IITSIRNADM++KGTVRIASTNITEN+VKILLREGFIEN RK +N++ FLV TLRHRR KG YR IL KRISRPGLRIY NY+RIP+IL G+GIVILSTS+GIMTDR ARL++IGGEILCYIW Sbjct: 1 MGRDTIANIITSIRNADMDKKGTVRIASTNITENIVKILLREGFIENVRK--HQENQRFFLVSTLRHRRTSKGVYRTIL--KRISRPGLRIYSNYQRIPKILGGIGIVILSTSQGIMTDREARLKKIGGEILCYIW 132
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_PLAOC (30S ribosomal protein S8, chloroplastic OS=Platanus occidentalis GN=rps8 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.616e-51 Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIADIITSIRNADM++KG VRI TNI EN++KILLREGFIEN RK ++ K FLV TLRHRRNRK PY+ IL KRISRPGLRIY NY+RIPRIL G+GIVILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 1 MGRDTIADIITSIRNADMDKKGRVRIGYTNIAENIIKILLREGFIENVRK--HRESNKYFLVSTLRHRRNRKRPYKTIL--KRISRPGLRIYSNYQRIPRILGGIGIVILSTSRGIMTDREARLEGIGGEILCYIW 132
BLAST of CX047101 vs. ExPASy Swiss-Prot
Match: RR8_NYMAL (30S ribosomal protein S8, chloroplastic OS=Nymphaea alba GN=rps8 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.616e-51 Identity = 108/136 (79.41%), Postives = 117/136 (86.03%), Query Frame = -3 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIADIIT IRNADM++KGTVRI STNITEN+VKILLREGFIEN RK +N K+FLVLTLRHRRNRK YR IL KRISRPGLRIY N +RIPRI G+G+VILSTSRGIMTDR ARLERIGGEIL YIW Sbjct: 1 MGRDTIADIITYIRNADMDKKGTVRIPSTNITENIVKILLREGFIENVRK--HRENNKDFLVLTLRHRRNRKRAYRNIL--KRISRPGLRIYSNSQRIPRISGGIGVVILSTSRGIMTDREARLERIGGEILFYIW 132 The following BLAST results are available for this feature:
BLAST of CX047101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047101 ID=CX047101; Name=CX047101; organism=Citrus sinensis; type=EST; length=917bpback to top |