CX047086

Overview
NameCX047086
Unique NameCX047086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SYNJA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 89/243 (36.63%), Postives = 134/243 (55.14%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V +V+LDGWG  +  + N +  A TP +DS   + P    L++A G AVGLP+   MGNSEVGH  LGAGR+  Q    +  A+ +G ++ +    E  + +K   + G  H IGL S+GGVHS +D L  LLK A++ G     +H +TDGRD L       +  +EK+L  L G GV   IA+  GR Y  MDR +  W+  ++ ++  +  + P   +SA E ++    Q +  D+++PP
Sbjct:    9 VVLVILDGWGYREAPEGNAVLAARTPVVDSLWATYPHT--LLQASGRAVGLPS-GQMGNSEVGHLTLGAGRVVPQELVRISDAIETGSLFHEPLLVEVCHRLKE--QGGRFHFIGLCSEGGVHSHIDHLYGLLKLAAQAGIPAY-VHAITDGRDTLPRDGARVLAALEKELQWL-GSGV---IATLSGR-YYAMDR-DRRWERTQKAYEI-LTEDGPGCGRSAAEVMEDFYAQ-DITDEFIPP 237          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SHESR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 86/239 (35.98%), Postives = 134/239 (56.07%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +A+++LDGWG  +    N I+ A+TP +D  + +A     L+   G  VGLP +  MGNSEVGH  LG+GRI  Q    +  A+A  +  Q+    + +  + + G  +H++GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+ G +   + DL    G G   +IAS  GR Y  MDR +N WD V + +D    G+A  ++ +AV A++   E+ N ND+++
Sbjct:    8 IALLILDGWGYRENTHMNAIYHANTPVLD--RLNAQYAHGLISGSGLDVGLP-DGQMGNSEVGHINLGSGRIVYQELTRISKAIADHEFEQNPALCDAVDAAVKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKGSLSHFD-DLFTTLGHG---RIASIIGR-YFAMDR-DNRWDRVSQAYDLITQGKAKFQYDNAVTALEAAYER-NENDEFV 236          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 83/247 (33.60%), Postives = 137/247 (55.47%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +S N  + +++LDGWG  + D+YN I  A+TP  D + ++ P    L++A G  VGLP E  MGNSEVGH  +GAGR+  Q    ++ A+ +GK  ++  F+ +    +    +LH++GLLS GGVHS    L  LL   +++  + + LH+  DGRD    S++  ++ + ++LA    K   A I S  GR Y  MDR +  W+ V+  ++    G++  +F  A  A+     +   +D+++PP
Sbjct:    1 MSHNAPLVLMILDGWGYNENDRYNAIAKANTPQWDEWWQTCPHI--LLKASGLPVGLPDEQ-MGNSEVGHMHIGAGRVIQQDFTRINEAINNGKFAKNAVFHEVIDQLKKTEKSLHIMGLLSPGGVHSHEQHLFALLALCNQKKFRSVHLHLFLDGRDTPPQSALDSLKCLNEELA----KHPVATINSICGR-YYAMDR-DKRWERVEPVYNLLTQGKSERQFPDAETAI-HFYYKNKISDEFVPP 237          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Paris) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 83/247 (33.60%), Postives = 137/247 (55.47%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +S N  + +++LDGWG  + D+YN I  A+TP  D + ++ P    L++A G  VGLP E  MGNSEVGH  +GAGR+  Q    ++ A+ +GK  ++  F+ +    +    +LH++GLLS GGVHS    L  LL   +++  + + LH+  DGRD    S++  ++ + ++LA    K   A I S  GR Y  MDR +  W+ V+  ++    G++  +F  A  A+     +   +D+++PP
Sbjct:    1 MSHNAPLVLMILDGWGYNENDRYNAIAKANTPQWDEWWQTCPHI--LLKASGLPVGLPDEQ-MGNSEVGHMHIGAGRVIQQDFTRINEAINNGKFAKNAVFHEVIDQLKKTEKSLHIMGLLSPGGVHSHEQHLFALLALCNQKKFRSVHLHLFLDGRDTPPQSALDSLKCLNEELA----KHPVATINSICGR-YYAMDR-DKRWERVEPVYNLLTQGKSERQFPDAETAI-HFYYKNKISDEFVPP 237          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CYAP8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 8801) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 87/241 (36.10%), Postives = 124/241 (51.45%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V +V+LDGWG  +  + N I +A TP MD    S P    L+   G  VGLP    MGNSEVGH  LGAGRI  Q    +  A+    + ++     I          LHLIGL SDGGVHS LD L  LL+ A E+   ++ +H++TDGRD      +  V  +E  + E+   GV  +I +  GR Y  MDR +  WD +++ +D     + P   +SA E +K   +  +  D+++ P
Sbjct:    9 VVLVILDGWGYRQSTEANAIALAKTPVMDCLWTSYPRT--LIHTSGKDVGLPN-GQMGNSEVGHLNLGAGRIVPQELVRISDAVEDKSLLRNPALVNICQEVRDRQSKLHLIGLCSDGGVHSHLDHLIGLLELAKEQHLDQVCIHVITDGRDTNTNEGINAVAKLESSIKEI---GV-GRIVTVSGR-YYAMDR-DRRWDRIQKAYDVYT-QDRPGDGRSATEVIKDFYKN-SITDEFIEP 238          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 93/239 (38.91%), Postives = 131/239 (54.81%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD-EGFNYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +++LDG+G  +  + N I +A  P +D   K  P  +    A G AVGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  +++ +    ++   +  T LHL GLLSDGGVHS +  L  LL+ A   G + + +H   DGRD    S   F+E +E  +AEL   GV  +IAS  GR YV MDR +N WD V++ + A V GE   +  +AVEAV     +   ND+++ P
Sbjct:    8 LMILDGYGLNEKTEGNAIALAKKPVLDKLMKDYP--FVKGNASGMAVGLP-EGQMGNSEVGHLNMGAGRIVYQELTRITKEIQDGDFFENTQLIKAVENCKKNNTALHLFGLLSDGGVHSHITHLYGLLELAKRHGLENVYVHAFLDGRDTAPTSGKSFMEALEAKMAEL---GV-GRIASVTGRYYV-MDR-DNRWDRVEKAYAALVDGEGV-EAANAVEAVAASYAE-GVNDEFVLP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_VIBVY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio vulnificus (strain YJ016) GN=gpmI PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.340e-27
Identity = 87/248 (35.08%), Postives = 134/248 (54.03%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT-----LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +S    +A+V+LDG+G  +    N I  A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  ++  G+  Q      +  + +T       +H++GL+S GGVHS  D +   ++ A+ERGA++I LH   DGRD    S+ G ++  +   A+L GKG   ++AS  GR Y  MDR +N+WD V+  +D     +A   + SAV  +    E+   ND+++
Sbjct:    1 MSAKKPLALVILDGYGYREDTASNAIANAKTPVMDALIANQPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKSILDGEFQQTAA---LVEAIDTAVKAEKAVHIMGLMSPGGVHSHEDHILAAVEMAAERGAEKIYLHCFLDGRDTPPRSAEGSLQRFQDLFAKL-GKG---RVASLVGR-YYAMDR-DNNWDRVQVAYDLLTQAKADFTYDSAVAGLAAAYER-GENDEFV 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_VIBVU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio vulnificus GN=gpmI PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.340e-27
Identity = 87/248 (35.08%), Postives = 134/248 (54.03%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT-----LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +S    +A+V+LDG+G  +    N I  A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  ++  G+  Q      +  + +T       +H++GL+S GGVHS  D +   ++ A+ERGA++I LH   DGRD    S+ G ++  +   A+L GKG   ++AS  GR Y  MDR +N+WD V+  +D     +A   + SAV  +    E+   ND+++
Sbjct:    1 MSAKKPLALVILDGYGYREDTASNAIANAKTPVMDALIANQPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKSILDGEFQQTAA---LVEAIDTAVKAEKAVHIMGLMSPGGVHSHEDHILAAVEMAAERGAEKIYLHCFLDGRDTPPRSAEGSLQRFQDLFAKL-GKG---RVASLVGR-YYAMDR-DNNWDRVQVAYDLLTQAKADFTYDSAVAGLAAAYER-GENDEFV 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SYNPX (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain WH8102) GN=gpmI PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.340e-27
Identity = 77/207 (37.20%), Postives = 115/207 (55.56%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWD 737
            V + +LDGWG     ++N I   DTP M++   + P    L++A GS VGLP +  MGNSEVGH  +GAGRI  Q    +   +   ++        +    +  TGTLHL+GL SDGGVHS ++ L  L+  A+  G K++ +H +TDGRD    S++G +  +++ + E    GV   +AS  GR Y  MDR +  WD  ++ +D
Sbjct:   18 VVLTILDGWGHRNDSEHNAIRQGDTPVMEALWHAYPHA--LIQASGSHVGLP-DHQMGNSEVGHLTIGAGRIIRQELVRISDTVRDDQLNNTPALVELAEHLQNDTGTLHLLGLCSDGGVHSHVNHLCGLIHWAAAAGIKKVAVHAITDGRDTPTQSAMGSITLVQRAMEE---AGV-GHLASLCGR-YWAMDR-DKRWDRTEKAYD 215          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SILPO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Silicibacter pomeroyi GN=gpmI PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.340e-27
Identity = 79/213 (37.09%), Postives = 113/213 (53.05%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGE 755
            V + +LDGWG       N  ++A TPT D+     P   RL+  HG  VGLP+   MGNSEVGH  +GAGR+ A     +DLA+  G  + +        +     GT HL+GL+SDGGVH  L+ +    +  +  G   + +H +TDGRDV   S+ GF+  +E  L +       A+I +  GR Y  +DR +N W+ V+  +DA V GE
Sbjct:    7 VVLCILDGWGLSDDKTANAPYLAKTPTFDAIMTKGPHA-RLI-THGPDVGLPS-GQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEDGSFFDNAALRDFIARTRAAGGTAHLMGLVSDGGVHGHLNHIIAAAQAITNAGVP-VVMHAITDGRDVAPKSAYGFMAELEDRLPK------GARIVTVTGR-YFALDR-DNRWERVQEAYDAMVRGE 207          
The following BLAST results are available for this feature:
BLAST of CX047086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_SYNJA1.026e-2736.632,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESR1.026e-2735.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPH1.026e-2733.602,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPA1.026e-2733.602,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CYAP81.026e-2736.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOPH1.026e-2738.912,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBVY1.340e-2735.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBVU1.340e-2735.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNPX1.340e-2737.202,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SILPO1.340e-2737.092,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A09-A17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047086 ID=CX047086; Name=CX047086; organism=Citrus sinensis; type=EST; length=842bp
CACTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCGCCTTCAATCC
AAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATCC
ACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGCTGGATGGCTGGG
GTGAGTACAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCCC
ACCATGGACTCTTTCAAGAAGTCTGCACCTGAGAGGTGGAGGTTGGTCCG
AGCTCATGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAACA
GTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGGT
GCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATGA
GGGATTTAATTACATTAAGCCGTCTTTTGAAACCGGCACATTGCACCTTA
TTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCAG
TTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTCA
TATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTCG
TAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGAC
GCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGTTA
TGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCTTG
GAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAACTA
AGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTT
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