CX047086

Overview
NameCX047086
Unique NameCX047086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_VIBC3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gpmI PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.209e-30
Identity = 92/245 (37.55%), Postives = 137/245 (55.92%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +S    +A+V+LDGWG  + +  N I+ A TP MDS   + P    L+ A G  VGLP +  MGNSEVGH  +GAGRI  Q    +  A+  G+   ++     I  +   G  +HL+GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  +   A+L GKG   +IAS  GR Y  MDR +N+WD V++ +D   L +    + SAVEA++    +   ND+++
Sbjct:    1 MSAKKPMALVILDGWGYREDNANNAINNARTPVMDSLMANNPHT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRIVYQDLTRITKAIMDGEFQHNKVLVAAIDKAVAAGKAVHLMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAEASLKRFQDLFAKL-GKG---RIASIVGR-YYAMDR-DNNWDRVEKAYDLLTLAQGEFTYDSAVEALQAAYAR-EENDEFV 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_MYXXD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Myxococcus xanthus (strain DK 1622) GN=gpmI PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.885e-30
Identity = 90/241 (37.34%), Postives = 130/241 (53.94%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            V + +LDGWG  +    N I +A TP +D  K ++P  +  ++  G AVGLP E  MGNSEVGH  +GAGRI  Q    ++ A  SG++ Q+          +     LHL+GL+S GGVHS +D L  LLK A ER    + +H   DGRD    S++G+VE +E+ L E        +IA+  GR Y  MDR +  WD V + ++A V G  P K   A+ A++    +    D+++ P
Sbjct:    7 VLLCILDGWGIRQERDNNAIVLAGTPHLD--KLASPYPFTELQTAGLAVGLP-EGQMGNSEVGHTNIGAGRIVYQDLVRINRAAESGELAQNPVLRAALDGVKADGKALHLLGLVSPGGVHSSMDHLFALLKAAKERNVAHVYVHAFLDGRDTPPQSALGYVEELERFLHETH----TGRIATVTGRFY-AMDR-DKRWDRVHQAYEALVFGRGP-KAPDALSAIRASYAE-KVTDEFVKP 236          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI1_METBF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gpmI1 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.885e-30
Identity = 84/239 (35.15%), Postives = 129/239 (53.97%), Query Frame = 3
Query:  129 VVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            +++LDGWG  +  + N I  A TP +D   +  P  W  + A G AVGLP E  MGNSEVGH  +GAGRI  Q    ++ ++  G  +++  F            +LHL+GL+S GGVHS +  +  L+K A + G K++ +H   DGRDV   +++  +E ++    E      +A+IA+  GR Y  MDR +  WD  K  +DA  +G AP+K   A  AV +  ++    D+++ P
Sbjct:   13 LIILDGWGYREAREGNAILAARTPNLDHLIEEYP--WCFLEASGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQDLTRINFSIRKGDFFKNPAFLGAISNAKANDSSLHLMGLVSYGGVHSYMAHIHALIKLAQQEGVKKVYIHAFLDGRDVPPKAALKDIEELDAFCKE----NGNAKIATISGR-YYAMDR-DKRWDRTKLAYDALTMGVAPYKTPDAETAVSEAYKR-GETDEFVKP 241          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SACD2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gpmI PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.768e-30
Identity = 86/239 (35.98%), Postives = 134/239 (56.07%), Query Frame = 3
Query:  123 VAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +A+++LDG+G  + DKYN I+ A  PT        P+    +   G AVGLP E  MGNSEVGH  LGAGR+  Q    ++ A+A G  Y +  +       ++    +H+IGLLSDGGVHS  D +  +++ A +RGA+++ +H   DGRD    S+   ++  E+ L  L G     +IAS  GR +  +DR +N WD V++ +D  V G+A    +SA   ++   E+ + ND+++
Sbjct:    8 LALIILDGFGYSESDKYNAINAAKAPTWRKIWAENPKT--TIATSGMAVGLP-EGQMGNSEVGHMTLGAGRVVYQNFTRINKAIADGDFYTNPVYTKAVDDAQSQGKAVHVIGLLSDGGVHSHEDHMIAMMELAVKRGAEKVYMHAFLDGRDTPPRSAKAPLQKTEEKLKALGG----GKIASIIGRFF-ALDR-DNRWDRVQQAFDLMVDGKAAFTAQSATAGLEAAYER-DENDEFV 236          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_CLOTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=gpmI PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.768e-30
Identity = 91/245 (37.14%), Postives = 136/245 (55.51%), Query Frame = 3
Query:  111 RNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPP 839
            ++ +V +++LDG+G     + N I  A+ P +D F +  P    +VR  G  VGLP +  MGNSEVGH  +GAGRI  Q    +  ++  G  ++ + F     +       LHL GLLSDGGVHS    L  LL+ A  +  K + +H   DGRDV   S++G+VE +E  + E+   GV  +IA+  GR Y  MDR +N W+ VK  +DA VLG   ++ +SA EAV +  ++    D+++ P
Sbjct:    2 KDKLVMLIILDGYGINPRKEGNAIEAANKPNIDRFMREYPNT--IVRTSGMDVGLP-DGQMGNSEVGHTNIGAGRIVYQELTRITKSIQDGDFFEKKEFLDAAENCRKHNSKLHLFGLLSDGGVHSHNTHLYGLLEFAKRQNLKDVYVHCFFDGRDVPPDSAMGYVEELENKIREI---GV-GEIATVMGR-YYAMDR-DNRWERVKLAYDAMVLGRG-NQAQSAKEAVAESYKRQEF-DEFVKP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_VIBFM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain MJ11) GN=gpmI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.921e-30
Identity = 88/245 (35.92%), Postives = 139/245 (56.73%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +S    +A+V+LDG+G  +    N I  A+TP +D    + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  A++ G+  Q+E   N I  + + G  +H++GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  ++  A+L GKG   +IAS  GR Y  MDR +N+W+ V++ +D     +A   F +AVE ++    +   ND+++
Sbjct:    1 MSAKKPMALVILDGYGHRETQADNAITNANTPVLDGLMANQPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKAISDGEFQQNETLVNAIDKAVKAGKAVHIMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAENSLKNFQELFAKL-GKG---RIASLVGR-YYAMDR-DNNWERVQKAYDLMTEAKAEFTFATAVEGLEAAYAR-EENDEFV 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_VIBF1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.921e-30
Identity = 88/245 (35.92%), Postives = 139/245 (56.73%), Query Frame = 3
Query:  105 LSRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYL 833
            +S    +A+V+LDG+G  +    N I  A+TP +D    + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  A++ G+  Q+E   N I  + + G  +H++GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  ++  A+L GKG   +IAS  GR Y  MDR +N+W+ V++ +D     +A   F +AVE ++    +   ND+++
Sbjct:    1 MSAKKPMALVILDGYGHRETQADNAITNANTPVLDGLMANQPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKAISDGEFQQNETLVNAIDKAVKAGKAVHIMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAENSLKNFQELFAKL-GKG---RIASLVGR-YYAMDR-DNNWERVQKAYDLMTEAKAEFTFATAVEGLEAAYAR-EENDEFV 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_BACLD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gpmI PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.921e-30
Identity = 90/243 (37.04%), Postives = 136/243 (55.97%), Query Frame = 3
Query:  114 NNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLP 836
            N + A+++LDG+G       N +  A  P  D +    P +   + A G AVGLP +  MGNSEVGH  +GAGRI  Q    V++A+  G+  Q+E F   +K   E GT LHL GLLSDGGVHS +  L  LLK A + G + + +H   DGRDV   ++  +++ ++  + E+   GV  +IA+  GR Y +MDR +  WD V++ + A   GE P K+++ ++ VK   E    ++  +P
Sbjct:    3 NKLAALIILDGFGLRDETVGNAVAQAKKPNFDRYWNKYPHQ--TLTASGEAVGLP-DGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFEQNETFLAAMKHVKEKGTNLHLFGLLSDGGVHSHIHHLYALLKLAKKEGVENVYIHGFLDGRDVGPQTAEKYIKELQDQIEEI---GV-GEIATLSGR-YYSMDR-DKRWDRVEKAYRAMAYGEGP-KYQNPLDVVKDSYENGIYDEFVIP 235          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_SHELP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.428e-30
Identity = 86/230 (37.39%), Postives = 126/230 (54.78%), Query Frame = 3
Query:  108 SRNNIVAVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAV 791
            +R   +A+++LDGWG  +    N ++ A+TP +D   K  P    L+   G  VGLP +  MGNSEVGH  +G+GR+  Q    +  ++  G+   +  F     K     G +H++GLLS GGVHS    +Q + K A  RGAK++ LH   DGRD    S+ G ++   +  AEL G G   +IAS  GR Y  MDR +N WD V + ++    G+A H ++ AVEA+
Sbjct:    3 TRKRPLALLILDGWGYRENTHMNAVYHANTPVLDRLNKEYPNS--LISGSGLDVGLP-DGQMGNSEVGHINIGSGRVVYQELTRIGKSIEDGEFDSNPAFVDAVDKAIAADGAVHIMGLLSPGGVHSHESHIQAMCKMAVARGAKQVYLHAFLDGRDTPPRSAKGSLQAFNELFAEL-GTG---RIASLIGR-YYAMDR-DNRWDRVSQAYELITQGKALHLYQDAVEAL 223          
BLAST of CX047086 vs. ExPASy Swiss-Prot
Match: GPMI_HAHCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Hahella chejuensis (strain KCTC 2396) GN=gpmI PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.428e-30
Identity = 94/230 (40.87%), Postives = 124/230 (53.91%), Query Frame = 3
Query:  126 AVVVLDGWGEYKPDKYNCIHVADTPTMDSFKKSAPERWRLVRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQ 809
            A+++LDGWG  +    N I  A+TP  D      P    L+   G AVGLP E  MGNSEVGH  LGAGRI  Q    +   +  G   Q+   +  I  +   G  +HL+GLLS GGVHS  D +    K A ERGA ++ +H   DGRD    S+   +E  +K L EL G G   ++AS  GR Y  MDR +N WD V+  +D   LGEAP+  +SAV+A+    E+
Sbjct:    9 ALLILDGWGYREGKDSNAIANANTPFWDQISSQNPHV--LIHTSGMAVGLP-EGQMGNSEVGHMNLGAGRIVYQNFTRITKDIEDGVFAQNPAISSAIDKAVSNGKAVHLLGLLSPGGVHSHEDHILAACKVARERGADKVFVHAFLDGRDTPPRSAQPSLERTDKLLKEL-GCG---RVASIIGR-YYAMDR-DNRWDRVQAAYDLLTLGEAPYHAESAVQALTAAYER 229          
The following BLAST results are available for this feature:
BLAST of CX047086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI_VIBC32.209e-3037.552,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYXXD2.885e-3037.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI1_METBF2.885e-3035.152,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SACD23.768e-3035.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOTH3.768e-3037.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBFM4.921e-3035.922,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBF14.921e-3035.922,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACLD4.921e-3037.042,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHELP6.428e-3037.392,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HAHCH6.428e-3040.872,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A09-A17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047086 ID=CX047086; Name=CX047086; organism=Citrus sinensis; type=EST; length=842bp
CACTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCGCCTTCAATCC
AAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATCC
ACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGCTGGATGGCTGGG
GTGAGTACAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCCC
ACCATGGACTCTTTCAAGAAGTCTGCACCTGAGAGGTGGAGGTTGGTCCG
AGCTCATGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAACA
GTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGGT
GCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATGA
GGGATTTAATTACATTAAGCCGTCTTTTGAAACCGGCACATTGCACCTTA
TTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCAG
TTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTCA
TATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTCG
TAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGAC
GCACAGATTGCATCTGGAGGAGGCCGCATGTACGTCACGATGGACCGTTA
TGAGAATGATTGGGATGTTGTCAAACGAGGATGGGATGCCCAAGTTCTTG
GAGAAGCTCCACACAAGTTTAAGAGCGCCGTTGAAGCTGTCAAAAAACTA
AGGGAACAGCCCAATGCCAATGACCAGTACTTACCTCCATTT
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